Literature DB >> 28802165

The world according to GARP transcription factors.

Alaeddine Safi1, Anna Medici1, Wojciech Szponarski1, Sandrine Ruffel1, Benoît Lacombe1, Gabriel Krouk2.   

Abstract

Plant specific GARP transcription factor family (made of ARR-B and G2-like) contains genes with very diverse in planta functions: nutrient sensing, root and shoot development, floral transition, chloroplast development, circadian clock oscillation maintenance, hormonal transport and signaling. In this work we review: first, their structural but distant relationships with MYB transcription factors, second, their role in planta, third, the diversity of their Cis-regulatory elements, fourth, their potential protein partners. We conclude that the GARP family may hold keys to understand the interactions between nutritional signaling pathways (nitrogen and phosphate at least) and development. Understanding how plant nutrition and development are coordinated is central to understand how to adapt plants to an ever-changing environment. Consequently GARPs are likely to attract increasing research attentions, as they are likely at the crossroads of these fundamental processes.
Copyright © 2017 Elsevier Ltd. All rights reserved.

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Year:  2017        PMID: 28802165     DOI: 10.1016/j.pbi.2017.07.006

Source DB:  PubMed          Journal:  Curr Opin Plant Biol        ISSN: 1369-5266            Impact factor:   7.834


  24 in total

1.  Repression of Nitrogen Starvation Responses by Members of the Arabidopsis GARP-Type Transcription Factor NIGT1/HRS1 Subfamily.

Authors:  Takatoshi Kiba; Jun Inaba; Toru Kudo; Nanae Ueda; Mineko Konishi; Nobutaka Mitsuda; Yuko Takiguchi; Youichi Kondou; Takeshi Yoshizumi; Masaru Ohme-Takagi; Minami Matsui; Kentaro Yano; Shuichi Yanagisawa; Hitoshi Sakakibara
Journal:  Plant Cell       Date:  2018-04-05       Impact factor: 11.277

2.  A GARP transcription factor anther dehiscence defected 1 (OsADD1) regulates rice anther dehiscence.

Authors:  Yanjia Xiao; Shimin You; Weiyi Kong; Qianying Tang; Wenting Bai; Yue Cai; Hai Zheng; Chaolong Wang; Ling Jiang; Chunming Wang; Zhigang Zhao; Jianmin Wan
Journal:  Plant Mol Biol       Date:  2019-08-16       Impact factor: 4.076

3.  GOLDEN2-LIKE Transcription Factors Regulate WRKY40 Expression in Response to Abscisic Acid.

Authors:  Rafiq Ahmad; Yutong Liu; Tian-Jing Wang; Qingxiang Meng; Hao Yin; Xiao Wang; Yifan Wu; Nan Nan; Bao Liu; Zheng-Yi Xu
Journal:  Plant Physiol       Date:  2019-02-05       Impact factor: 8.340

4.  A cell-cycle-dependent GARP-like transcriptional repressor regulates the initiation of differentiation in Giardia lamblia.

Authors:  Han-Wei Shih; Germain C M Alas; Alexander R Paredez
Journal:  Proc Natl Acad Sci U S A       Date:  2022-05-25       Impact factor: 12.779

5.  Identification and expression analysis of GARP superfamily genes in response to nitrogen and phosphorus stress in Spirodela polyrhiza.

Authors:  Xuyao Zhao; Jingjing Yang; Xiaozhe Li; Gaojie Li; Zuoliang Sun; Yan Chen; Yimeng Chen; Manli Xia; Yixian Li; Lunguang Yao; Hongwei Hou
Journal:  BMC Plant Biol       Date:  2022-06-25       Impact factor: 5.260

6.  The transcription factor complex CmAP3-CmPI-CmUIF1 modulates carotenoid metabolism by directly regulating carotenogenic gene CmCCD4a-2 in chrysanthemum.

Authors:  Chenfei Lu; Jiaping Qu; Chengyan Deng; Fangye Liu; Fan Zhang; He Huang; Silan Dai
Journal:  Hortic Res       Date:  2022-02-19       Impact factor: 7.291

7.  In silico characterization, and expression analysis of rice golden 2-like (OsGLK) members in response to low phosphorous.

Authors:  Karma Landup Bhutia; Ernieca Lyngdoh Nongbri; Ebenazar Gympad; Mayank Rai; Wricha Tyagi
Journal:  Mol Biol Rep       Date:  2020-02-21       Impact factor: 2.316

8.  GARP transcription factors repress Arabidopsis nitrogen starvation response via ROS-dependent and -independent pathways.

Authors:  Alaeddine Safi; Anna Medici; Wojciech Szponarski; Florence Martin; Anne Clément-Vidal; Amy Marshall-Colon; Sandrine Ruffel; Frédéric Gaymard; Hatem Rouached; Julie Leclercq; Gloria Coruzzi; Benoît Lacombe; Gabriel Krouk
Journal:  J Exp Bot       Date:  2021-05-04       Impact factor: 6.992

9.  Integrative iTRAQ-based proteomic and transcriptomic analysis reveals the accumulation patterns of key metabolites associated with oil quality during seed ripening of Camellia oleifera.

Authors:  Zhouchen Ye; Jing Yu; Wuping Yan; Junfeng Zhang; Dongmei Yang; Guanglong Yao; Zijin Liu; Yougen Wu; Xilin Hou
Journal:  Hortic Res       Date:  2021-07-01       Impact factor: 6.793

10.  Transcriptional analysis of arogenate dehydratase genes identifies a link between phenylalanine biosynthesis and lignin biosynthesis.

Authors:  Jorge El-Azaz; Fernando de la Torre; María Belén Pascual; Sandrine Debille; Francis Canlet; Luc Harvengt; Jean-François Trontin; Concepción Ávila; Francisco M Cánovas
Journal:  J Exp Bot       Date:  2020-05-30       Impact factor: 6.992

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