Literature DB >> 28798946

Ex vivo Ooplasmic Extract from Developing Drosophila Oocytes for Quantitative TIRF Microscopy Analysis.

Imre Gaspar1, Anne Ephrussi1.   

Abstract

Understanding the dynamic behavior and the continuously changing composition of macromolecular complexes, subcellular structures and organelles is one of areas of active research in both cell and developmental biology, as these changes directly relate to function and subsequently to the development and homeostasis of the organism. Here, we demonstrate the use of the developing Drosophila oocyte to study dynamics of messenger ribonucleoprotein complexes (mRNPs) with high spatiotemporal resolution. The combination of Drosophila genetics with total internal reflection (TIRF) microscopy, image processing and data analysis gives insight into mRNP motility and composition dynamics with unprecedented precision.

Entities:  

Keywords:  Intracellular motility; Oocyte; Ooplasmic extract; TIRF microscopy; ex vivo assay

Year:  2017        PMID: 28798946      PMCID: PMC5548227          DOI: 10.21769/BioProtoc.2380

Source DB:  PubMed          Journal:  Bio Protoc        ISSN: 2331-8325


  12 in total

Review 1.  Drosophila oogenesis.

Authors:  Rebecca Bastock; Daniel St Johnston
Journal:  Curr Biol       Date:  2008-12-09       Impact factor: 10.834

2.  Brightness enhanced DNA FIT-probes for wash-free RNA imaging in tissue.

Authors:  Felix Hövelmann; Imre Gaspar; Anne Ephrussi; Oliver Seitz
Journal:  J Am Chem Soc       Date:  2013-12-10       Impact factor: 15.419

3.  A single Drosophila embryo extract for the study of mitosis ex vivo.

Authors:  Ivo A Telley; Imre Gáspár; Anne Ephrussi; Thomas Surrey
Journal:  Nat Protoc       Date:  2013-01-17       Impact factor: 13.491

4.  Reversible response of protein localization and microtubule organization to nutrient stress during Drosophila early oogenesis.

Authors:  Yuko Shimada; K Mahala Burn; Ryusuke Niwa; Lynn Cooley
Journal:  Dev Biol       Date:  2011-04-23       Impact factor: 3.582

5.  Dynamic organization and plasticity of sponge bodies.

Authors:  Mark J Snee; Paul M Macdonald
Journal:  Dev Dyn       Date:  2009-04       Impact factor: 3.780

6.  Aster migration determines the length scale of nuclear separation in the Drosophila syncytial embryo.

Authors:  Ivo A Telley; Imre Gáspár; Anne Ephrussi; Thomas Surrey
Journal:  J Cell Biol       Date:  2012-06-18       Impact factor: 10.539

7.  Mitotic spindle assembly by two different pathways in vitro.

Authors:  K E Sawin; T J Mitchison
Journal:  J Cell Biol       Date:  1991-03       Impact factor: 10.539

8.  Klar ensures thermal robustness of oskar localization by restraining RNP motility.

Authors:  Imre Gaspar; Yanxun V Yu; Sean L Cotton; Dae-Hwan Kim; Anne Ephrussi; Michael A Welte
Journal:  J Cell Biol       Date:  2014-07-21       Impact factor: 10.539

9.  An RNA-binding atypical tropomyosin recruits kinesin-1 dynamically to oskar mRNPs.

Authors:  Imre Gáspár; Vasiliy Sysoev; Artem Komissarov; Anne Ephrussi
Journal:  EMBO J       Date:  2016-12-27       Impact factor: 11.598

10.  In vivo imaging of oskar mRNA transport reveals the mechanism of posterior localization.

Authors:  Vitaly L Zimyanin; Katsiaryna Belaya; Jacques Pecreaux; Michael J Gilchrist; Alejandra Clark; Ilan Davis; Daniel St Johnston
Journal:  Cell       Date:  2008-09-05       Impact factor: 41.582

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  4 in total

1.  Staufen2-mediated RNA recognition and localization requires combinatorial action of multiple domains.

Authors:  Simone Heber; Imre Gáspár; Jan-Niklas Tants; Johannes Günther; Sandra M Fernandez Moya; Robert Janowski; Anne Ephrussi; Michael Sattler; Dierk Niessing
Journal:  Nat Commun       Date:  2019-04-10       Impact factor: 14.919

2.  Live cell imaging reveals 3'-UTR dependent mRNA sorting to synapses.

Authors:  Karl E Bauer; Inmaculada Segura; Imre Gaspar; Volker Scheuss; Christin Illig; Georg Ammer; Saskia Hutten; Eugénia Basyuk; Sandra M Fernández-Moya; Janina Ehses; Edouard Bertrand; Michael A Kiebler
Journal:  Nat Commun       Date:  2019-07-18       Impact factor: 14.919

3.  Terminal Deoxynucleotidyl Transferase Mediated Production of Labeled Probes for Single-molecule FISH or RNA Capture.

Authors:  Imre Gaspar; Frank Wippich; Anne Ephrussi
Journal:  Bio Protoc       Date:  2018-03-05

4.  Liquid-to-solid phase transition of oskar ribonucleoprotein granules is essential for their function in Drosophila embryonic development.

Authors:  Mainak Bose; Marko Lampe; Julia Mahamid; Anne Ephrussi
Journal:  Cell       Date:  2022-03-23       Impact factor: 66.850

  4 in total

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