| Literature DB >> 28791347 |
Zhen-Hong Li1, Li-Li Li1, Mei-Fang Jin1, Xu-Qin Chen1, Qi Sun1, Hong Ni1.
Abstract
Although it has been established that recurrent or prolonged clinical seizures during infancy may cause lifelong brain damage, the underlying molecular mechanism is still not well elucidated. The present study, to the best of our knowledge, is the first to investigate the expression of twenty zinc (Zn)/lipid metabolism‑associated genes in the hippocampus and cerebral cortex of rats following recurrent neonatal seizures. In the current study, 6‑day‑old Sprague‑Dawley rats were randomly divided into control (CONT) and recurrent neonatal seizure (RS) groups. On postnatal day 35 (P35), mossy fiber sprouting and gene expression were assessed by Timm staining and reverse transcription‑quantitative polymerase chain reaction, respectively. Of the twenty genes investigated, seven were significantly downregulated, while four were significantly upregulated in the RS group compared with CONT rats, which was observed in the hippocampus but not in the cerebral cortex. Meanwhile, aberrant mossy fiber sprouting was observed in the supragranular region of the dentate gyrus and Cornu Ammonis 3 subfield of the hippocampus in the RS group. In addition, linear correlation analysis identified significant associations between the expression of certain genes in the hippocampus, which accounted for 40% of the total fifty‑five gene pairs among the eleven regulated genes. However, only eight gene pairs in the cerebral cortex exhibited significant positive associations, which accounted for 14.5% of the total. The results of the present study indicated the importance of hippocampal Zn/lipid metabolism‑associated genes in recurrent neonatal seizure‑induced aberrant mossy fiber sprouting, which may aid the identification of novel potential targets during epileptogenesis.Entities:
Mesh:
Substances:
Year: 2017 PMID: 28791347 PMCID: PMC5647039 DOI: 10.3892/mmr.2017.7160
Source DB: PubMed Journal: Mol Med Rep ISSN: 1791-2997 Impact factor: 2.952
Oligonucleotide primers and probes for reverse transcription-quantitative polymerase chain reaction analysis.
| Gene | GenBank accession number | Primer sequence | Probe sequence |
|---|---|---|---|
| β-actin | NM_031144 | F: 5′-TTGCTGACAGGATGCAGAAGGAGA-3′ | 5′-FAM-AAGTACATTGCTCCTCCTGAGCGCAA-TAMRA-3′ |
| R: 5′-ACTCCTGCTTGCTGATCCACATCT-3′ | |||
| ZnT-1 | NM_022853 | F: 5′-CGTTGTTGTGAATGCCTTGGT-3′ | 5′-FAM-TTCTACTTTTCCTGGAAGGGTTGTA-TAMRA-3′ |
| R: 5′-GGGTTCACACAAAAGTCGTCTTC-3′ | |||
| ZnT-2 | RNU50927 | F: 5′-GGCTGGATCCTGGACTAATGTT-3′ | 5′-FAM-CTCACACCACAGCTGGAGAGACACTGAGG-TAMRA-3′ |
| R: 5′-ACACCCCAAAATCCCTTTCTG-3′ | |||
| ZnT-3 | NM_001013243 | F: 5′-TGGGCGCTGACGCTTACT-3′ | 5′-FAM-ACCACGTTGCCTCCGCACACCT-TAMRA-3′ |
| R: 5′-GTCAGCCGTGGAGTCAATAGC-3′ | |||
| ZnT-4 | NM_172066.1 | F: 5′-GCTGAAGCAGAGGAAGGTGAA-3′ | 5′-FAM-CAGGCTGACCATCGCTGCCGT-TAMRA-3′ |
| R: 5′-TCTCCGATCATGAAAAGCAAGTAG-3′ | |||
| ZnT-5 | NM_001106404.1 | F: 5′-CCAGCACATGTCTGGCCTAA-3′ | 5′-FAM-CACTGGCTTCCACGATGTCCTGGCTAT-TAMRA-3′ |
| R: 5′-TTTGCAGTACTTCATGGATTCCA-3′ | |||
| ZnT-6 | NM_001106708.1 | F: 5′-CGGCATTATCCCAGGACTCA-3′ | 5′-FAM-TTCTTGCCCCGCATGAACCCG-TAMRA-3′ |
| R: 5′-CCAGCAAGATCGATCAGAACAA-3′ | |||
| ZnT-7 | XM_001073594.1 | F: 5′-TTGGGATCCGCGTCTGA-3′ | 5′-FAM-TCGTCTCTGCTGTCACTGCCGCC-TAMRA-3′ |
| R: 5′-CCCTCTAGAAGTGACTCGGTATGG-3′ | |||
| DCT-1 | NM_001108855.1 | F: 5′-TGGCTGCCTCAGCATCTG-3′ | 5′-FAM-AAAACCAGAGCCCCTTCCCTACGCA-TAMRA-3′ |
| R: 5′-CCCAGTTGTTGAGTGGTTTGG-3′ | |||
| Zip-6 | NM_001024745.1 | F: 5′-CTCACTGCTGGCTTGTTCATG-3′ | 5′-FAM-TCGCTCTGGTCGACATGGTACCCG-TAMRA-3′ |
| R: 5′-CGTGATCACTGGCATCATTGT-3′ | |||
| Zip-7 | NM_001008885.1 | F: 5′-GACTTGGCACACAACTTCACAGA-3′ | 5′-FAM-CTGGCCATTGGTGCTTCCTTCCG-TAMRA-3′ |
| R: 5′-GGACTGTCATCGTGGTCAGGAT-3′ | |||
| Gh | NM_001034848 | F: 5′-GCTGCTCTCCTGCTTCAAGAA-3′ | 5′-FAM-ACCTGCACAAGGCAGAGACCTACCTGC-TAMRA-3′ |
| R: 5′-AGCGGCGACACTTCATGAC-3′ | |||
| Nr3c1 | NM_012576 | F: 5′-GGGAGGAGCTACAGTCAAGGTTT-3′ | 5′-FAM-CATCTTCGCCCTCAGTGGCTGCTG-TAMRA-3′ |
| R: 5′-GCCTTTCGAGAAATCAAGGAGAA-3′ | |||
| Abcc8 | NM_013039 | F: 5′-ATCTCCCCAGGACAGAAGATTG-3′ | 5′-FAM-CCGCACAGGCAGTGGAAAATCCTC-TAMRA-3′ |
| R: 5′-CGGAAAAAGGCGAGAGAGAA-3′ | |||
| Npy | NM_012614 | F: 5′-TCTGCCTGTCCCACCAATG-3′ | 5′-FAM-TGCCACCACCAGGCTGGATTCC-TAMRA-3′ |
| R: 5′-CAACGACAACAAGGGAAATGG-3′ | |||
| GluR1 | NM_031608 | F: 5′-GGCGCCGGACCAATTAC-3′ | 5′-FAM-CCCTCCACGTGATCGAAAT |
| R: 5′- CCAATCTTTCGGATTCCATCA-3′ | GAAAC-TAMRA-3′ | ||
| GluR2 | NM_017261 | F: 5′-CCAAGGACTCGGGAAGTAAGG-3′ | 5′-FAM-AAAGACCAGTGCCCTCA GTCTGAGC-TAMRA-3′ |
| R: 5′-CCCCCGACAAGGATGTAGAA-3′ | |||
| PRG-3 | NM_201271 | F: 5′-CGTGATTGCCGGCTTCA-3′ | 5′-FAM-CCTGGGCACCGCAGTAGCCC-TAMRA-3′ |
| R: 5′-CCACACACATGCCCAAAAAC-3′ | |||
| ANX7 | NM_130416 | F: 5′-TTGTGGATGTCGTGTCTA-3′ | 5′-FAM-CGTTCCAATGACCAGAGGCA-TAMRA-3′ |
| R: 5′-GGCATCATAGTATGTAGGAG-3′ | |||
| ANX3 | NM_012823 | F: 5′-CCTGCTGCTGGCCGTAGT-3′ | 5′-FAM-CGCTGTACGAGGAACACCCCAGCT-TAMRA-3′ |
| R: 5′-TGATGAAGTCTTCCTGCCAAAA-3′ | |||
| Bcl-2 | NM_016993 | F: 5′-CTGGGATGCCTTTGTGGAA-3′ | 5′-FAM-CCCCAGCATGCGACCTCTGTTTG- TAMRA-3′ |
| R: 5′-TGAGCAGCGTCTTCAGAGACA-3′ |
ZnT, zinc transporter; DCT-1, solute carrier family 41 member 1; Zip, Zrt/Irt-like protein; Gh, growth hormone; Nr3c1, nuclear receptor subfamily 3 group C member 1; Abcc8, ATP binding cassette subfamily C member 8; Npy, neuropeptide Y; GluR1, glutamate ionotropic receptor AMPA type subunit 1; GluR2, glutamate ionotropic receptor AMPA type subunit 2; PRG, plasticity-related gene 3; ANX7, annexin A7; ANX3, annexin A3; F, forward; R, reverse; FAM, 6-carboxy fluorescein; TAMRA, tetramethylrhodamine.
Figure 1.Mossy fiber sprouting by Timm staining in (A) CONT and (B) RS groups. Timm staining was used to investigate mossy fiber sprouting in the dentate gyrus and CA3 subfield of the hippocampus of rats in CONT and RS groups. Notably, excessive Timm staining was observed in the inner molecular layer of the granule cells in the dentate gyrus (arrow) and the stratum pyramidale of the CA3 subfield (arrowhead) in the RS group. CONT, control; RS, recurrent seizures; CA3, Cornu Ammonis 3.
Figure 2.Reverse transcription-quantitative polymerase chain reaction analysis of Zn transporter-associated genes. When comparing mRNA levels between control and recurrent seizure groups, ZnT-1, ZnT-2, ZnT-3, Zip-6 and Zip-7 exhibited significant differences in the hippocampus. *P<0.05 vs. control. Zn, zinc; ZnT, Zn transporter; Zip, Zrt/Irt-like protein; DCT-1, solute carrier family 41 member 1.
Figure 4.Reverse transcription-quantitative polymerase chain reaction analysis of neuroexcitability and neuroprotection-associated genes. When comparing mRNA levels between control and recurrent seizure groups, PRG-3 and Bcl-2 exhibited significant differences in the hippocampus. *P<0.05 vs. control. PRG, plasticity-related gene; GluR1, glutamate ionotropic receptor AMPA type subunit 1; GluR2, glutamate ionotropic receptor AMPA type subunit 2; ANX7, annexin A7; ANX3, annexin A3.
Figure 5.Linear correlation analysis of reverse transcription-quantitative polymerase chain reaction results in the hippocampus. (A) The r-values of eight gene pairs were >0.7 with P<0.01, and the majority of these gene pairs consisted of a zinc transporter and a metabolism-associated gene. (B) Upper, the r-values of four gene pairs were >0.7 with P<0.01, with pairs consisting of metabolism-associated genes and neuroexcitability/neuroprotection-associated genes. Lower, significant positive correlations (P<0.05) were observed for twenty-two gene pairs, which accounted for 40% of the total fifty-five gene pair combinations. Npy, neuropeptide Y; ZnT, zinc transporter; PRG, plasticity-related gene; Gh, growth hormone; Zip, Zrt/Irt-like protein; Nr3c1, nuclear receptor subfamily 3 group C member 1; Abcc8, ATP binding cassette subfamily C member 8.
Figure 6.Linear correlation analysis of reverse transcription-quantitative polymerase chain reaction results in the cerebral cortex. Only eight pairs of genes exhibited significant positive correlations, which accounted for 14.5% of the total fifty-five gene pair combinations. Npy, neuropeptide Y; Abcc8, ATP binding cassette subfamily C member 8; Zip, Zrt/Irt-like protein; Gh, growth hormone; ZnT, zinc transporter.