Literature DB >> 28777554

Dissipative Assembly of Aqueous Carboxylic Acid Anhydrides Fueled by Carbodiimides.

Lasith S Kariyawasam1, C Scott Hartley1.   

Abstract

Biochemical systems make extensive use of chemically fueled processes (e.g., using ATP), but analogous abiotic systems remain rare. A key challenge is the identification of transformations that can be adapted to a range of applications and make use of readily available chemical fuels. In this context, the generation of transient covalent bonds is a fundamental tool for nonequilibrium systems chemistry. Here, we show that carbodiimides constitute a simple class of chemical fuels for dissipative assembly, taking advantage of their known reactivity to produce (hydrolytically unstable) anhydrides from carboxylic acids in water. Both aliphatic and aromatic anhydrides are formed on convenient time scales using the common, commercially available peptide coupling agent 1-ethyl-3-(3-(dimethylamino)propyl)carbodiimide (EDC). An important feature of this reaction is that no part of the carbodiimide is incorporated into the transient species; that is, the fuel is decoupled from the structure-and thus function-of the assembled state. We show that intramolecular anhydride formation of oligo(ethylene glycol) diacids gives macrocycles analogous to crown ethers, representing minimal examples of out-of-equilibrium supramolecular hosts. The kinetics and yields of macrocycle formation respond to cation guests, with the presence of matched cations decreasing their overall production.

Entities:  

Year:  2017        PMID: 28777554     DOI: 10.1021/jacs.7b06099

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  20 in total

Review 1.  Synthesis and characterization of chemically fueled supramolecular materials driven by carbodiimide-based fuels.

Authors:  Fabian Schnitter; Alexander M Bergmann; Benjamin Winkeljann; Jennifer Rodon Fores; Oliver Lieleg; Job Boekhoven
Journal:  Nat Protoc       Date:  2021-06-30       Impact factor: 13.491

Review 2.  Chemical fuels for molecular machinery.

Authors:  Stefan Borsley; Benjamin M W Roberts; David A Leigh
Journal:  Nat Chem       Date:  2022-07-01       Impact factor: 24.274

Review 3.  Bioinspired temporal supramolecular polymerization.

Authors:  Shikha Dhiman; Aritra Sarkar; Subi J George
Journal:  RSC Adv       Date:  2018-05-22       Impact factor: 4.036

4.  Autonomous fuelled directional rotation about a covalent single bond.

Authors:  Stefan Borsley; Elisabeth Kreidt; Benjamin M W Roberts; David A Leigh
Journal:  Nature       Date:  2022-04-06       Impact factor: 69.504

5.  Dissipative biocatalytic cascades and gated transient biocatalytic cascades driven by nucleic acid networks.

Authors:  Yu Ouyang; Pu Zhang; Itamar Willner
Journal:  Sci Adv       Date:  2022-05-06       Impact factor: 14.957

6.  Self-selection of dissipative assemblies driven by primitive chemical reaction networks.

Authors:  Marta Tena-Solsona; Caren Wanzke; Benedikt Riess; Andreas R Bausch; Job Boekhoven
Journal:  Nat Commun       Date:  2018-05-23       Impact factor: 14.919

7.  Substrate-Induced Self-Assembly of Cooperative Catalysts.

Authors:  Pablo Solís Muñana; Giulio Ragazzon; Julien Dupont; Chloe Z-J Ren; Leonard J Prins; Jack L-Y Chen
Journal:  Angew Chem Weinheim Bergstr Ger       Date:  2018-11-15

8.  Dissipative Catalysis with a Molecular Machine.

Authors:  Chiara Biagini; Stephen D P Fielden; David A Leigh; Fredrik Schaufelberger; Stefano Di Stefano; Dean Thomas
Journal:  Angew Chem Int Ed Engl       Date:  2019-06-21       Impact factor: 15.336

9.  Organocatalytic Control over a Fuel-Driven Transient-Esterification Network*.

Authors:  Michelle P van der Helm; Chang-Lin Wang; Bowen Fan; Mariano Macchione; Eduardo Mendes; Rienk Eelkema
Journal:  Angew Chem Int Ed Engl       Date:  2020-09-02       Impact factor: 15.336

10.  Substrate-Induced Self-Assembly of Cooperative Catalysts.

Authors:  Pablo Solís Muñana; Giulio Ragazzon; Julien Dupont; Chloe Z-J Ren; Leonard J Prins; Jack L-Y Chen
Journal:  Angew Chem Int Ed Engl       Date:  2018-11-15       Impact factor: 15.336

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