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Literature DB >> 28770850

Elsässer et al. reply.

Simon J Elsässer¹, Kyung-Min Noh², Nichole Diaz², C David Allis², Laura A Banaszynski³.

Abstract

Year: 2017 PMID： 28770850 DOI： 10.1038/nature23278

Source DB: PubMed Journal: Nature ISSN： 0028-0836 Impact factor: 49.962

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12 in total

1. On the role of H3.3 in retroviral silencing.

Authors: Gernot Wolf; Rita Rebollo; Mohammad M Karimi; Adam D Ewing; Rui Kamada; Warren Wu; Brenda Wu; Mahesh Bachu; Keiko Ozato; Geoffrey J Faulkner; Dixie L Mager; Matthew C Lorincz; Todd S Macfarlan
Journal: Nature Date: 2017-08-02 Impact factor: 49.962

2. Atrx promotes heterochromatin formation at retrotransposons.

Authors: Dennis Sadic; Katharina Schmidt; Sophia Groh; Ivan Kondofersky; Joachim Ellwart; Christiane Fuchs; Fabian J Theis; Gunnar Schotta
Journal: EMBO Rep Date: 2015-05-26 Impact factor: 8.807

3. A comprehensive evaluation of normalization methods for Illumina high-throughput RNA sequencing data analysis.

Authors: Marie-Agnès Dillies; Andrea Rau; Julie Aubert; Christelle Hennequet-Antier; Marine Jeanmougin; Nicolas Servant; Céline Keime; Guillemette Marot; David Castel; Jordi Estelle; Gregory Guernec; Bernd Jagla; Luc Jouneau; Denis Laloë; Caroline Le Gall; Brigitte Schaëffer; Stéphane Le Crom; Mickaël Guedj; Florence Jaffrézic
Journal: Brief Bioinform Date: 2012-09-17 Impact factor: 11.622

4. The Daxx/Atrx Complex Protects Tandem Repetitive Elements during DNA Hypomethylation by Promoting H3K9 Trimethylation.

Authors: Quanyuan He; Hyeung Kim; Rui Huang; Weisi Lu; Mengfan Tang; Fengtao Shi; Dong Yang; Xiya Zhang; Junjiu Huang; Dan Liu; Zhou Songyang
Journal: Cell Stem Cell Date: 2015-09-03 Impact factor: 24.633

5. Hira-dependent histone H3.3 deposition facilitates PRC2 recruitment at developmental loci in ES cells.

Authors: Laura A Banaszynski; Duancheng Wen; Scott Dewell; Sarah J Whitcomb; Mingyan Lin; Nichole Diaz; Simon J Elsässer; Ariane Chapgier; Aaron D Goldberg; Eli Canaani; Shahin Rafii; Deyou Zheng; C David Allis
Journal: Cell Date: 2013-09-26 Impact factor: 41.582

6. The genomic landscape shaped by selection on transposable elements across 18 mouse strains.

Authors: Christoffer Nellåker; Thomas M Keane; Binnaz Yalcin; Kim Wong; Avigail Agam; T Grant Belgard; Jonathan Flint; David J Adams; Wayne N Frankel; Chris P Ponting
Journal: Genome Biol Date: 2012-06-15 Impact factor: 13.583

7. Differential expression analysis for sequence count data.

Authors: Simon Anders; Wolfgang Huber
Journal: Genome Biol Date: 2010-10-27 Impact factor: 13.583

8. Histone H3.3 is required for endogenous retroviral element silencing in embryonic stem cells.

Authors: Simon J Elsässer; Laura A Banaszynski; Kyung-Min Noh; Nichole Diaz; C David Allis
Journal: Nature Date: 2015-05-04 Impact factor: 49.962

9. ATRX Plays a Key Role in Maintaining Silencing at Interstitial Heterochromatic Loci and Imprinted Genes.

Authors: Hsiao P J Voon; Jim R Hughes; Christina Rode; Inti A De La Rosa-Velázquez; Thomas Jenuwein; Robert Feil; Douglas R Higgs; Richard J Gibbons
Journal: Cell Rep Date: 2015-04-09 Impact factor: 9.423

10. Genome-wide assessments reveal extremely high levels of polymorphism of two active families of mouse endogenous retroviral elements.

Authors: Ying Zhang; Irina A Maksakova; Liane Gagnier; Louie N van de Lagemaat; Dixie L Mager
Journal: PLoS Genet Date: 2008-02-29 Impact factor: 5.917

6 in total

Elsässer et al. reply.

1. On the role of H3.3 in retroviral silencing.

2. Atrx promotes heterochromatin formation at retrotransposons.

3. A comprehensive evaluation of normalization methods for Illumina high-throughput RNA sequencing data analysis.

4. The Daxx/Atrx Complex Protects Tandem Repetitive Elements during DNA Hypomethylation by Promoting H3K9 Trimethylation.

5. Hira-dependent histone H3.3 deposition facilitates PRC2 recruitment at developmental loci in ES cells.

6. The genomic landscape shaped by selection on transposable elements across 18 mouse strains.

7. Differential expression analysis for sequence count data.

8. Histone H3.3 is required for endogenous retroviral element silencing in embryonic stem cells.

9. ATRX Plays a Key Role in Maintaining Silencing at Interstitial Heterochromatic Loci and Imprinted Genes.

10. Genome-wide assessments reveal extremely high levels of polymorphism of two active families of mouse endogenous retroviral elements.

1. Unintegrated HIV-1 DNAs are loaded with core and linker histones and transcriptionally silenced.

2. ATRX promotes heterochromatin formation to protect cells from G-quadruplex DNA-mediated stress.

Review 3. Silencing and Transcriptional Regulation of Endogenous Retroviruses: An Overview.

4. CHAF1A/B mediate silencing of unintegrated HIV-1 DNAs early in infection.

Review 5. Silencing of Unintegrated Retroviral DNAs.

Review 6. SETDB1-Mediated Silencing of Retroelements.