Literature DB >> 28770577

SEC-SAXS and HDX-MS: A powerful combination. The case of the calcium-binding domain of a bacterial toxin.

Darragh P O'Brien1, Sébastien Brier2, Daniel Ladant1, Dominique Durand3, Alexandre Chenal1, Patrice Vachette3.   

Abstract

Small-angle X-ray scattering (SAXS) is a relatively simple experimental technique that provides information on the global conformation of macromolecules in solution, be they fully structured, partially, or extensively unfolded. Size exclusion chromatography in line with a SAXS measuring cell considerably improves the monodispersity and ideality of solutions, the two main requirements of a "good" SAXS sample. Hydrogen/deuterium exchange monitored by mass spectrometry (HDX-MS) offers a wealth of information regarding the solvent accessibility at the local (peptide) level. It constitutes a sensitive probe of local flexibility and, more generally, of structural dynamics. The combination of both approaches presented here is very powerful, as illustrated by the case of RD, a calcium-binding protein that is part of a bacterial virulence factor.
© 2017 International Union of Biochemistry and Molecular Biology, Inc.

Entities:  

Keywords:  RTX motif; calcium; hydrogen/deuterium exchange mass spectrometry; size-exclusion chromatography; small-angle X-ray scattering

Mesh:

Substances:

Year:  2017        PMID: 28770577     DOI: 10.1002/bab.1577

Source DB:  PubMed          Journal:  Biotechnol Appl Biochem        ISSN: 0885-4513            Impact factor:   2.431


  6 in total

1.  Revealing the architecture of protein complexes by an orthogonal approach combining HDXMS, CXMS, and disulfide trapping.

Authors:  Kunhong Xiao; Yang Zhao; Minjung Choi; Hongda Liu; Adi Blanc; Jiang Qian; Thomas J Cahill; Xue Li; Yunfang Xiao; Lisa J Clark; Sheng Li
Journal:  Nat Protoc       Date:  2018-05-24       Impact factor: 13.491

2.  Biophysical characterisation of human LincRNA-p21 sense and antisense Alu inverted repeats.

Authors:  Michael H D'Souza; Tyler Mrozowich; Maulik D Badmalia; Mitchell Geeraert; Angela Frederickson; Amy Henrickson; Borries Demeler; Michael T Wolfinger; Trushar R Patel
Journal:  Nucleic Acids Res       Date:  2022-06-10       Impact factor: 19.160

3.  Calmodulin fishing with a structurally disordered bait triggers CyaA catalysis.

Authors:  Darragh P O'Brien; Dominique Durand; Alexis Voegele; Véronique Hourdel; Marilyne Davi; Julia Chamot-Rooke; Patrice Vachette; Sébastien Brier; Daniel Ladant; Alexandre Chenal
Journal:  PLoS Biol       Date:  2017-12-29       Impact factor: 8.029

4.  A High-Affinity Calmodulin-Binding Site in the CyaA Toxin Translocation Domain is Essential for Invasion of Eukaryotic Cells.

Authors:  Alexis Voegele; Mirko Sadi; Darragh Patrick O'Brien; Pauline Gehan; Dorothée Raoux-Barbot; Maryline Davi; Sylviane Hoos; Sébastien Brûlé; Bertrand Raynal; Patrick Weber; Ariel Mechaly; Ahmed Haouz; Nicolas Rodriguez; Patrice Vachette; Dominique Durand; Sébastien Brier; Daniel Ladant; Alexandre Chenal
Journal:  Adv Sci (Weinh)       Date:  2021-03-08       Impact factor: 16.806

Review 5.  Bioengineering of Bordetella pertussis Adenylate Cyclase Toxin for Antigen-Delivery and Immunotherapy.

Authors:  Alexandre Chenal; Daniel Ladant
Journal:  Toxins (Basel)       Date:  2018-07-20       Impact factor: 4.546

6.  Antibody adsorption in protein-A affinity chromatography - in situ measurement of nanoscale structure by small-angle X-ray scattering.

Authors:  Jacek Plewka; Gonçalo L Silva; Rupert Tscheließnig; Harald Rennhofer; Cristina Dias-Cabral; Alois Jungbauer; Helga C Lichtenegger
Journal:  J Sep Sci       Date:  2018-10-16       Impact factor: 3.645

  6 in total

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