Literature DB >> 28764101

Probing the binding properties of dicyandiamide with pepsin by spectroscopy and docking methods.

Yuanyuan Yue1, Shufang Zhao2, Jianming Liu3, Xuyang Yan2, Yangyang Sun2.   

Abstract

Dicyandiamide (DCD), considered to be a nitrification inhibitor, poses threat to human's health with exposure from milk, infant formula and other food products. In this work, DCD was investigated for its binding reaction with pepsin using spectroscopy and docking methods. Fluorescence experiments indicated DCD quenched the fluorescence of pepsin through a static process. Thermodynamic analysis of the binding data (ΔH0 = -21.72 kJ mol-1 and ΔS0 = 17.61 J mol-1 K-1) suggested the involvement of hydrophobic and hydrogen bonding in the complex formation. The pepsin interacted with DCD at a hydrophobic cavity, leading to a conformational changes in the pepsin, as revealed from UV-vis absorption, Fourier transform infrared, the time-resolved fluorescence, three-dimensional fluorescence and circular dichroism spectral results.
Copyright © 2017 Elsevier Ltd. All rights reserved.

Entities:  

Keywords:  Dicyandiamide; Fluorescence; Molecular modeling; Pepsin

Mesh:

Substances:

Year:  2017        PMID: 28764101     DOI: 10.1016/j.chemosphere.2017.07.115

Source DB:  PubMed          Journal:  Chemosphere        ISSN: 0045-6535            Impact factor:   7.086


  2 in total

1.  Multi-spectroscopic studies on the interaction between traditional Chinese herb, helicid with pepsin.

Authors:  Manjunath D Meti; Yang Xu; Jiangfeng Xie; Yutao Chen; Zhibing Wu; Johnson Liu; Qingguo Han; Zhendan He; Zhangli Hu; Hong Xu
Journal:  Mol Biol Rep       Date:  2018-09-13       Impact factor: 2.316

2.  A molecular dynamics simulation study of the ACE2 receptor with screened natural inhibitors to identify novel drug candidate against COVID-19.

Authors:  Neha Srivastava; Prekshi Garg; Prachi Srivastava; Prahlad Kishore Seth
Journal:  PeerJ       Date:  2021-04-23       Impact factor: 2.984

  2 in total

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