| Literature DB >> 28763037 |
Amanda Lawrence1, Shadaesha Green2, Jum Sook Chung3.
Abstract
The insulin-like androgenic gland hormone (IAG) found in decapod crustaceans is known to regulate sexual development in males. IAG is produced in the male-specific endocrine tissue, the androgenic gland (AG); however, IAG expression has been also observed in other tissues of decapod crustacean species including Callinectes sapidus and Scylla paramamosain. This study aimed to isolate the full-length cDNA sequence of IAG from the AG of male red deep-sea crabs, Chaceon quinquedens (ChqIAG), and to examine its tissue distribution. To this end, we employed polymerase chain reaction cloning with degenerate primers and 5' and 3' rapid amplification of cDNA ends (RACE). The full-length ChqIAG cDNA sequence (1555 nt) includes a 366 nt 5' untranslated region a 453 nt open reading frame encoding 151 amino acids, and a relatively long 3' UTR of 733 nt. The ORF consists of a 19 aa signal peptide, 32 aa B chain, 56 aa C chain, and 44 aa A chain. The putative ChqIAG amino acid sequence is most similar to those found in other crab species, including C. sapidus and S. paramamosain, which are clustered together phylogenetically.Entities:
Keywords: Chaceon quinquedens; androgenic gland; cold water species; insulin-like androgenic gland hormone (IAG); red deep-sea crab
Mesh:
Substances:
Year: 2017 PMID: 28763037 PMCID: PMC5577596 DOI: 10.3390/md15080241
Source DB: PubMed Journal: Mar Drugs ISSN: 1660-3397 Impact factor: 5.118
Figure 1The full-length cDNA and deduced amino acid sequence of ChqIAG isolated from the androgenic gland (AG) of male C. quinquedens (GenBank Accession No. KY497474). Predicted signal peptide is italicized. The predicted start codon (ATG) is bolded and underlined, and the stop codon (TAG) is bolded, double underlined and marked with “*”. The nucleotide number is on the right and the amino acid number is on the left hand side of the figure. Two predicted cleavage sites (RHKR/RFRR) are boxed and a polyadenylation signal (AATAAA) is underlined in the 3′ untranslated region (UTR). The six conserved cysteine residues are circled. The B chain is bold and underlined, the C chain is bold and italicized and the A chain is bold and double underlined. The predicted N-glycosylation site is noted with a triangle.
Figure 2Maximum likelihood tree (using phylogeny.fr) of the open reading frame (ORF) sequence of crustacean insulin-like androgenic gland hormones (IAGs) and androgenic gland hormones (AGHs) obtained from the following species: C. quinquedens, KY497474; M. rosenbergii, ACJ38227.1; P. pelagicus, HM459854; E. sinensis, KU724192; S. paramamosain, JQ681748.1; Jasus edwardsii, KF908794; Macrobrachium lar, AB579012.1; Callinectes sapidus, KF792074.1; M. nipponense, KC460325; Sagmariasus verreauxi, KF220491; Cherax destructor, ACD91988; Palaemon pacificus, AB588014.1; Procambarus clarkii, KT343750. Armadillidium vulgare, BAA86893.1. Cherax quadricarinatus, DQ851163.1; F. chinensis, JQ388277.1; P. monodon, GU208677.1; P. paucidens, AB588013.1; M. japonicus, AB598415.1. The scale bar indicates the number of amino acid sequence substitutions per site. Distance represents neighbor-adjoining bootstrap values.
Primer sequences used for the isolation of the full-length cDNA of ChqIAG from the AG of C. quinquedens (d = degenerate).
| Primer Name | Primer Sequences (5′ → 3′) |
|---|---|
| dF1 | GAYTTYGAYTGYGGNSAYYT |
| dR2 | ACTGCGGCSACMTSGSCGACA |
| ChqIAG-3F1 | ACCAAGAACCTTATCCTCTGTATGCCTGACC |
| ChqIAG-3F2 | GCCCCCGCCCACCTCACGCAGTCCCCATGA |
| ChqIAG-3F3 | AGCGGTCTGTCAACGTGCACGACGAGTGCTGC |
| ChqIAG-5R1 | GCAGCACTCGTCGTGCACGTTGACAGACCGC |
| ChqIAG-5R2 | TGTCCATTGTGTCTTGACAAGCTGGAAGGCGA |
| ChqIAG-5R3 | ATCATCAGGGGTGTCAGCGCCCTGTGACTCGG |
| ChqIAG-st | ATGTTCCTGCCCGTGATTATACTACTGAT |
| ChqIAG-end | TACTGATTCTGAGCTGCTATAATTTCCCT |
| ChqAK-QF | CTGGGCCAGGTATACCGCCGCCTTGTCAGC |
| ChqAK-QR | GGGGAGCTTGATGTGGACGGAGGCACGCAC |
Figure 3Spatial expression analysis of ChqIAG in adult male (a) and female (b) tissues 1: eyestalk ganglia; 2: thoracic ganglia complex; 3: brain; 4: hypodermis; 5: muscle; 6: gill; 7: midgut; 8: hindgut; 9: heart; 10: hemocytes; 11: hepatopancreas; 12: testis/ovary; 13: androgenic gland/spermatheca; 14: no template control. Arginine kinase (ChqAK) was used as a reference gene for amplification.
Putative translational regulatory sites * present in the 5′ (top of the table) and 3′ (bottom of the table) UTRs of decapod crustacean IAG cDNA sequences.
| 5 | 1 | 1 | 1 | 1 | |||||||
| 6 | |||||||||||
| 9 | 1 | ||||||||||
| 7 | 1 | ||||||||||
| 3 | 3 | ||||||||||
| 9 | 1 | ||||||||||
| 6 | 1 | ||||||||||
| 4 | |||||||||||
| 6 | |||||||||||
| 4 | 2 | ||||||||||
| 3 | |||||||||||
| 5 | |||||||||||
| 2 | 1 | ||||||||||
| 3 | |||||||||||
| 5 | 4 | 3 | 1 | ||||||||
| 24 | 2 | 4 | 1 | 1 | 3 | ||||||
| 5 | 1 | 2 | 2 | 1 | |||||||
| 31 | 3 | 1 | 1 | 1 | 3 | ||||||
| 7 | 3 | 2 | 2 | 1 | 1 | ||||||
| 23 | 3 | 1 | 1 | 8 | |||||||
| 3 | 1 | 1 | 2 | 1 | |||||||
| 9 | 2 | 4 | 6 | 2 | |||||||
| 2 | 3 | 2 | 6 | 1 | 1 | ||||||
| 2 | 1 | ||||||||||
| 24 | 2 | 3 | 4 | 1 | 1 | 1 | 1 | 1 | |||
| 2 | 1 | 2 | 1 | 1 | |||||||
| 3 | 2 | 2 | 1 | 1 | 1 | ||||||
| 12 | 4 | 2 | 1 | ||||||||
| 8 | 2 | 1 | |||||||||
| 1 | |||||||||||
* Regulatory sites were analyzed using regrna.mbc.nctu.edutw/html/prediction.html: Terminal oligopyrimidine tract (TOP), internal ribosome entry site (IRES), upstream open reading frame (uORF), gamma interferon activated inhibitor of ceruloplasmin mRNA translation (GAIT element), selenocysteine insertion sequence (SECIS), alcohol dehydrogenase 3′ UTR down regulation control element (ADH_DRE), K-box (KB)/cytoplasmic polyadenylation response element (CPE), GY-box (GY), and Brd-box (BRD), Bruno 3′ UTR responsive element (BRE). Motif distribution row represents the number of sequences containing that particular motif (n = 16). Motif frequency row represents the frequency of that motif as a percentage of all motifs (n = 372). A. vulagre, J. edwardsii and P. monodon are excluded from this figure because only the coding region, not the full-length cDNA sequence of IAGs including 5′ and 3′ UTRs are available in National Center for Biotechnology Information (NCBI).