Literature DB >> 28762970

Interplay of point multipole moments and charge penetration for intermolecular electrostatic interaction energies from the University at Buffalo pseudoatom databank model of electron density.

Sławomir A Bojarowski1, Prashant Kumar1, Paulina M Dominiak1.   

Abstract

The strength of the University at Buffalo DataBank (UBDB) in Ees estimation is mainly due to charge overlap effects because the UBDB offers continuous representation of charge density which allows for a direct account of charge penetration in the derivation of electrostatic energies. In the UBDB model, these effects begin to play an important role at distances below twice the equilibrium distance and significantly increase as distances decrease. At equilibrium distances they are responsible for 30-50% of Ees for polar molecules and around 90% of Ees for nonpolar molecules. When the energy estimation from the UBDB is reduced to point multipoles, the results are comparable to point charges fitted to electrostatic potentials. On the other hand, particular components of energy from point multipole moments from the UBDB model are sensitive to the type of interaction and might be helpful in the characterization of interactions.

Entities:  

Keywords:  charge density; charge overlap effects; point multipole moments

Year:  2017        PMID: 28762970     DOI: 10.1107/S2052520617005510

Source DB:  PubMed          Journal:  Acta Crystallogr B Struct Sci Cryst Eng Mater        ISSN: 2052-5192


  4 in total

1.  Multipolar Atom Types from Theory and Statistical Clustering (MATTS) Data Bank: Restructurization and Extension of UBDB.

Authors:  Kunal Kumar Jha; Barbara Gruza; Aleksandra Sypko; Prashant Kumar; Michał Leszek Chodkiewicz; Paulina Maria Dominiak
Journal:  J Chem Inf Model       Date:  2022-08-09       Impact factor: 6.162

2.  Combining Molecular Dynamic Information and an Aspherical-Atom Data Bank in the Evaluation of the Electrostatic Interaction Energy in Multimeric Protein-Ligand Complex: A Case Study for HIV-1 Protease.

Authors:  Prashant Kumar; Paulina Maria Dominiak
Journal:  Molecules       Date:  2021-06-24       Impact factor: 4.411

3.  On the accuracy and precision of X-ray and neutron diffraction results as a function of resolution and the electron density model.

Authors:  W Fabiola Sanjuan-Szklarz; Magdalena Woińska; Sławomir Domagała; Paulina M Dominiak; Simon Grabowsky; Dylan Jayatilaka; Matthias Gutmann; Krzysztof Woźniak
Journal:  IUCrJ       Date:  2020-08-25       Impact factor: 4.769

4.  A Quantum Chemical Topology Picture of Intermolecular Electrostatic Interactions and Charge Penetration Energy.

Authors:  Fernando Jiménez-Grávalos; Dimas Suárez
Journal:  J Chem Theory Comput       Date:  2021-07-19       Impact factor: 6.006

  4 in total

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