| Literature DB >> 28761356 |
Lei Wang1, Jia Xu2, Baoxue Duan1.
Abstract
OBJECTIVE: Non-melanoma skin cancer (NMSC) is the most common malignancy with annually rising incidence. The aim of this study was to estimate the association between three coding polymorphisms (Arg399Gln, Arg194Trp, and Arg280His) of the DNA repair gene X-ray repair cross-complementing group 1 (XRCC1) and NMSC susceptibility.Entities:
Keywords: DNA repair; XRCC1; meta-analysis; non-melanoma skin cancer; polymorphism; risk factor
Year: 2017 PMID: 28761356 PMCID: PMC5518917 DOI: 10.2147/OTT.S133978
Source DB: PubMed Journal: Onco Targets Ther ISSN: 1178-6930 Impact factor: 4.147
Figure 1Selection process of all eligible articles of this meta-analysis.
The detailed characteristics of all studies included in this meta-analysis
| Author | Year | Country (ethnicity) | Mean age (years)
| Sample size
| Tumor types | Genotyping method | HWE in controls | ||
|---|---|---|---|---|---|---|---|---|---|
| Cases | Controls | Cases | Controls | ||||||
| Nelson et al | 2002 | UK (Caucasians) | – | – | 745 | 431 | BCC + SCC | PCR-RFLP | 0.185 |
| Yin et al | 2002 | Denmark (Caucasians) | 20–60 | 20–60 | 63 | 97 | BCC | SNaPshot | 0.774 |
| Yin et al | 2003 | Denmark (Caucasians) | <50 | <50 | 20 | 20 | BCC | PCR-RFLP | 0.983 |
| Han et al | 2005 | USA (Caucasians) | 64.7 | 64.5 | 586 | 874 | BCC + SCC | Sequencing | 0.161 |
| Festa et al | 2005 | Sweden/Finland (Caucasians) | – | – | 197 | 548 | BCC | PCR-RFLP | 0.973 |
| Thirumaran et al | 2006 | Sweden (Caucasians) | 63.5±11.7 | 60.0±11.8 | 529 | 533 | BCC | Sequencing | 0.838 |
| Kang et al | 2007 | Korea (Asian) | 68.98±12.6 | 46.42±16.6 | 212 | 207 | BCC + SCC | PCR-RFLP | 0.673 |
| Chiyomaru et al | 2012 | Japan (Asian) | 72.9±12.2 | 66.1±13.7 | 103 | 93 | BD + BCC + SCC | PCR-RFLP | 0.097 |
| Surdu et al | 2014 | Germany (Caucasians) | 30–79 | 30–79 | 618 | 527 | BCC + SCC | Sequencing | 0.838 |
| Hsu et al | 2015 | China Taiwan (Asian) | 56.13±6.87 | 54.38±6.26 | 70 | 210 | BCC + SCC + BD | PCR-RFLP | 0.156 |
Note: The data are presented as mean values ± standard deviation.
Abbreviations: –, not available; BCC, basal-cell skin cancer; SCC, squamous-cell skin cancer; BD, Bowen’s diseases; PCR-RFLP, polymerase chain reaction-restriction fragment length polymorphism; HWE, Hardy–Weinberg equilibrium.
Meta-analysis and stratified analyses of Arg399Gln, Arg194Trp, and Arg280His in the coding region of XRCC1 gene with NMSC risk under each genetic model
| SNPs | Group | N | Comparisons | Test of association
| Test of heterogeneity
| |||
|---|---|---|---|---|---|---|---|---|
| OR (95% CI) | Ph | Model | ||||||
| 10 | Gln vs Arg | 0.97 (0.90–1.05) | 0.42 | 26 | 0.21 | F | ||
| Gln/Gln vs Arg/Arg | 0.90 (0.77–1.06) | 0.20 | 22 | 0.24 | F | |||
| Gln/Arg vs Arg/Arg | 1.02 (0.92–1.14) | 0.69 | 0 | 0.46 | F | |||
| Gln/Gln + Gln/Arg vs Arg/Arg | 0.99 (0.90–1.10) | 0.89 | 5 | 0.40 | F | |||
| Gln/Gln vs Gln/Arg + Arg/Arg | 0.90 (0.77–1.04) | 0.16 | 28 | 0.18 | F | |||
| Asian | 3 | Gln vs Arg | 1.04 (0.70–1.55) | 0.85 | 70 | 0.04 | R | |
| Gln/Gln vs Arg/Arg | 0.94 (0.43–2.05) | 0.88 | 61 | 0.07 | R | |||
| Gln/Arg vs Arg/Arg | 1.39 (1.04–1.87) | 0.03 | 0 | 0.70 | F | |||
| Gln/Gln + Gln/Arg vs Arg/Arg | 1.26 (0.96–1.66) | 0.10 | 38 | 0.20 | F | |||
| Gln/Gln vs Gln/Arg + Arg/Arg | 0.83 (0.41–1.70) | 0.61 | 57 | 0.10 | R | |||
| Caucasians | 7 | Gln vs Arg | 0.95 (0.88–1.03) | 0.24 | 0 | 0.67 | F | |
| Gln/Gln vs Arg/Arg | 0.90 (0.76–1.07) | 0.22 | 5 | 0.39 | F | |||
| Gln/Arg vs Arg/Arg | 0.98 (0.87–1.09) | 0.67 | 0 | 0.78 | F | |||
| Gln/Gln + Gln/Arg vs Arg/Arg | 0.96 (0.86–1.07) | 0.42 | 0 | 0.82 | F | |||
| Gln/Gln vs Gln/Arg + Arg/Arg | 0.91 (0.77–1.06) | 0.23 | 23 | 0.25 | F | |||
| BCC | 9 | Gln vs Arg | 0.97 (0.90–1.06) | 0.51 | 40 | 0.10 | F | |
| Gln/Gln vs Arg/Arg | 0.89 (0.74–1.06) | 0.20 | 2 | 0.42 | F | |||
| Gln/Arg vs Arg/Arg | 1.04 (0.92–1.17) | 0.52 | 45 | 0.07 | F | |||
| Gln/Gln + Gln/Arg vs Arg/Arg | 1.00 (0.90–1.12) | 0.94 | 46 | 0.06 | F | |||
| Gln/Gln vs Gln/Arg + Arg/Arg | 0.89 (0.72–1.09) | 0.24 | 20 | 0.27 | F | |||
| SCC | 5 | Gln vs Arg | 0.99 (0.78–1.25) | 0.92 | 63 | 0.03 | R | |
| Gln/Gln vs Arg/Arg | 0.99 (0.56–1.76) | 0.98 | 71 | 0.008 | R | |||
| Gln/Arg vs Arg/Arg | 0.99 (0.82–1.19) | 0.88 | 0 | 0.58 | F | |||
| Gln/Gln + Gln/Arg vs Arg/Arg | 0.95 (0.80–1.13) | 0.57 | 19 | 0.30 | F | |||
| Gln/Gln vs Gln/Arg + Arg/Arg | 0.97 (0.57–1.64) | 0.90 | 70 | 0.01 | R | |||
| 4 | Trp vs Arg | 0.98 (0.82–1.19) | 0.86 | 46 | 0.13 | F | ||
| Trp/Trp vs Arg/Arg | 0.72 (0.43–1.22) | 0.22 | 0 | 0.88 | F | |||
| Trp/Arg vs Arg/Arg | 1.10 (0.72–1.70) | 0.65 | 60 | 0.06 | R | |||
| Trp/Trp + Trp/Arg vs Arg/Arg | 1.03 (0.69–1.54) | 0.87 | 58 | 0.07 | R | |||
| Trp/Trp vs Trp/Arg + Arg/Arg | 0.72 (0.44–1.20) | 0.21 | 0 | 0.97 | F | |||
| Asian | 2 | Trp vs Arg | 0.91 (0.61–1.36) | 0.64 | 58 | 0.12 | R | |
| Trp/Trp vs Arg/Arg | 0.74 (0.41–1.31) | 0.30 | 0 | 0.53 | F | |||
| Trp/Arg vs Arg/Arg | 1.06 (0.45–2.51) | 0.90 | 82 | 0.02 | R | |||
| Trp/Trp + Trp/Arg vs Arg/Arg | 0.97 (0.47–2.01) | 0.94 | 78 | 0.03 | R | |||
| Trp/Trp vs Trp/Arg + Arg/Arg | 0.74 (0.43–1.29) | 0.29 | 0 | 0.98 | F | |||
| Caucasians | 2 | Trp vs Arg | 1.17 (0.87–1.56) | 0.30 | 0 | 0.34 | F | |
| Trp/Trp vs Arg/Arg | 0.66 (0.18–2.35) | 0.52 | 0 | 0.62 | F | |||
| Trp/Arg vs Arg/Arg | 1.27 (0.92–1.74) | 0.14 | 0 | 0.73 | F | |||
| Trp/Trp + Trp/Arg vs Arg/Arg | 1.22 (0.90–1.67) | 0.20 | 0 | 0.50 | F | |||
| Trp/Trp vs Trp/Arg + Arg/Arg | 0.64 (0.18–2.29) | 0.50 | 0 | 0.64 | F | |||
| BCC | 4 | Trp vs Arg | 1.02 (0.81–1.29) | 0.84 | 0 | 0.59 | F | |
| Trp/Trp vs Arg/Arg | 0.97 (0.53–1.77) | 0.92 | 0 | 0.80 | F | |||
| Trp/Arg vs Arg/Arg | 1.06 (0.80–1.41) | 0.68 | 0 | 0.49 | F | |||
| Trp/Trp + Trp/Arg vs Arg/Arg | 1.05 (0.80–1.38) | 0.73 | 0 | 0.53 | F | |||
| Trp/Trp vs Trp/Arg + Arg/Arg | 1.25 (0.70–2.25) | 0.46 | 0 | 0.74 | F | |||
| SCC | 3 | Trp vs Arg | 0.91 (0.55–1.51) | 0.71 | 73 | 0.03 | R | |
| Trp/Trp vs Arg/Arg | 0.38 (0.16–0.92) | 0.03 | 0 | 0.90 | F | |||
| Trp/Arg vs Arg/Arg | 1.11 (0.52–2.38) | 0.78 | 82 | 0.004 | R | |||
| Trp/Trp + Trp/Arg vs Arg/Arg | 0.99 (0.49–2.00) | 0.98 | 80 | 0.007 | R | |||
| Trp/Trp vs Trp/Arg + Arg/Arg | 0.42 (0.18–1.00) | 0.05 | 0 | F | ||||
| 2 | His vs Arg | 0.88 (0.38–2.05) | 0.78 | 74 | 0.05 | R | ||
| His/His vs Arg/Arg | 0.87 (0.21–3.50) | 0.84 | 0 | 0.34 | F | |||
| His/Arg vs Arg/Arg | 0.97 (0.48–1.95) | 0.93 | 58 | 0.12 | R | |||
| His/His + His/Arg vs Arg/Arg | 0.92 (0.41–2.07) | 0.84 | 69 | 0.07 | R | |||
| His/His vs His/Arg + Arg/Arg | 0.87 (0.21–3.53) | 0.84 | 0 | 0.38 | F | |||
Abbreviations: NMSC, non-melanoma skin cancer; SNP, single nucleotide polymorphism; N, number of included studies; OR, odds ratio; CI, confidence interval; F, fixed-effect model; R, random-effect model; BCC, basal-cell skin cancer; SCC, squamous-cell skin cancer; Ph, P-value of heterogeneity.
Figure 2Forest plot of the association between XRCC1 Arg399Gln polymorphism and non-melanoma skin cancer risk under allelic model.
Abbreviation: NMSC, non-melanoma skin cancer.
Figure 3Forest plot obtained by subgroup analysis based on ethnicity showing the association between XRCC1 Arg399Gln polymorphism and non-melanoma skin cancer risk under heterogeneous model in Asian populations.
Abbreviation: NMSC, non-melanoma skin cancer.
Figure 4Forest plot obtained by subgroup analysis based on tumor types showing the association between XRCC1 Arg194Trp polymorphism and squamous-cell skin cancer risk under homogeneous model.
Abbreviation: SCC, squamous-cell skin cancer.
Figure 5Funnel plot showing XRCC1 Arg399Gln polymorphism in non-melanoma skin cancer risk under allelic model.
Abbreviations: OR, odds ratio; SE, standard error.