Literature DB >> 28757893

Next-generation sequencing and norovirus.

Matthew Cotten1, Marion Koopmans1.   

Abstract

Keywords:  NoV tracking; next-generation sequencing

Year:  2016        PMID： 28757893     DOI： 10.2217/fvl-2016-0099

Source DB:  PubMed          Journal:  Future Virol        ISSN： 1746-0794            Impact factor:   1.831


× No keyword cloud information.
  18 in total

1.  Norovirus Whole-Genome Sequencing by SureSelect Target Enrichment: a Robust and Sensitive Method.

Authors:  Julianne R Brown; Sunando Roy; Christopher Ruis; Erika Yara Romero; Divya Shah; Rachel Williams; Judy Breuer
Journal:  J Clin Microbiol       Date:  2016-08-03       Impact factor: 5.948

2.  Contribution of intra- and interhost dynamics to norovirus evolution.

Authors:  Rowena A Bull; John-Sebastian Eden; Fabio Luciani; Kerensa McElroy; William D Rawlinson; Peter A White
Journal:  J Virol       Date:  2011-12-28       Impact factor: 5.103

3.  Metagenomic analysis of viruses in feces from unsolved outbreaks of gastroenteritis in humans.

Authors:  Nicole E Moore; Jing Wang; Joanne Hewitt; Dawn Croucher; Deborah A Williamson; Shevaun Paine; Seiha Yen; Gail E Greening; Richard J Hall
Journal:  J Clin Microbiol       Date:  2014-10-22       Impact factor: 5.948

4.  Metagenomic sequencing for virus identification in a public-health setting.

Authors:  Sanela Svraka; Karyna Rosario; Erwin Duizer; Harrie van der Avoort; Mya Breitbart; Marion Koopmans
Journal:  J Gen Virol       Date:  2010-07-21       Impact factor: 3.891

5.  Viral phylogeny in court: the unusual case of the Valencian anesthetist.

Authors:  Anne-Mieke Vandamme; Oliver G Pybus
Journal:  BMC Biol       Date:  2013-07-19       Impact factor: 7.431

6.  Full genome virus detection in fecal samples using sensitive nucleic acid preparation, deep sequencing, and a novel iterative sequence classification algorithm.

Authors:  Matthew Cotten; Bas Oude Munnink; Marta Canuti; Martin Deijs; Simon J Watson; Paul Kellam; Lia van der Hoek
Journal:  PLoS One       Date:  2014-04-02       Impact factor: 3.240

7.  Resurgence of Ebola Virus Disease in Guinea Linked to a Survivor With Virus Persistence in Seminal Fluid for More Than 500 Days.

Authors:  Boubacar Diallo; Daouda Sissoko; Nicholas J Loman; Hadja Aïssatou Bah; Hawa Bah; Mary Claire Worrell; Lya Saidou Conde; Ramata Sacko; Samuel Mesfin; Angelo Loua; Jacques Katomba Kalonda; Ngozi A Erondu; Benjamin A Dahl; Susann Handrick; Ian Goodfellow; Luke W Meredith; Matthew Cotten; Umaru Jah; Raoul Emeric Guetiya Wadoum; Pierre Rollin; N'Faly Magassouba; Denis Malvy; Xavier Anglaret; Miles W Carroll; Raymond Bruce Aylward; Mamoudou Harouna Djingarey; Abdoulaye Diarra; Pierre Formenty; Sakoba Keïta; Stephan Günther; Andrew Rambaut; Sophie Duraffour
Journal:  Clin Infect Dis       Date:  2016-09-01       Impact factor: 9.079

8.  A next generation sequencing-based method to study the intra-host genetic diversity of norovirus in patients with acute and chronic infection.

Authors:  Maria E Hasing; Bart Hazes; Bonita E Lee; Jutta K Preiksaitis; Xiaoli L Pang
Journal:  BMC Genomics       Date:  2016-07-01       Impact factor: 3.969

9.  A modified RNA-Seq approach for whole genome sequencing of RNA viruses from faecal and blood samples.

Authors:  Elizabeth M Batty; T H Nicholas Wong; Amy Trebes; Karène Argoud; Moustafa Attar; David Buck; Camilla L C Ip; Tanya Golubchik; Madeleine Cule; Rory Bowden; Charis Manganis; Paul Klenerman; Eleanor Barnes; A Sarah Walker; David H Wyllie; Daniel J Wilson; Kate E Dingle; Tim E A Peto; Derrick W Crook; Paolo Piazza
Journal:  PLoS One       Date:  2013-06-10       Impact factor: 3.240

10.  Whole genome sequencing and de novo assembly identifies Sydney-like variant noroviruses and recombinants during the winter 2012/2013 outbreak in England.

Authors:  T H Nicholas Wong; Bethany L Dearlove; Jessica Hedge; Adam P Giess; Paolo Piazza; Amy Trebes; John Paul; Erasmus Smit; E Grace Smith; Julian K Sutton; Mark H Wilcox; Kate E Dingle; Tim E A Peto; Derrick W Crook; Daniel J Wilson; David H Wyllie
Journal:  Virol J       Date:  2013-11-13       Impact factor: 4.099
View more
  6 in total

Review 1.  Emergence of norovirus strains: A tale of two genes.

Authors:  Gabriel I Parra
Journal:  Virus Evol       Date:  2019-11-25

2.  Foodborne Norovirus State of Affairs in the EU Rapid Alert System for Food and Feed.

Authors:  Elias P Papapanagiotou
Journal:  Vet Sci       Date:  2017-11-25

3.  Prospective, Real-time Metagenomic Sequencing During Norovirus Outbreak Reveals Discrete Transmission Clusters.

Authors:  Amanda M Casto; Amanda L Adler; Negar Makhsous; Kristen Crawford; Xuan Qin; Jane M Kuypers; Meei-Li Huang; Danielle M Zerr; Alexander L Greninger
Journal:  Clin Infect Dis       Date:  2019-08-30       Impact factor: 9.079

4.  Characterization of Norovirus and Other Human Enteric Viruses in Sewage and Stool Samples Through Next-Generation Sequencing.

Authors:  Sofia Strubbia; My V T Phan; Julien Schaeffer; Marion Koopmans; Matthew Cotten; Françoise S Le Guyader
Journal:  Food Environ Virol       Date:  2019-08-24       Impact factor: 2.778

5.  Comparison of targeted next-generation sequencing for whole-genome sequencing of Hantaan orthohantavirus in Apodemus agrarius lung tissues.

Authors:  Jin Sun No; Won-Keun Kim; Seungchan Cho; Seung-Ho Lee; Jeong-Ah Kim; Daesang Lee; Dong Hyun Song; Se Hun Gu; Seong Tae Jeong; Michael R Wiley; Gustavo Palacios; Jin-Won Song
Journal:  Sci Rep       Date:  2019-11-12       Impact factor: 4.379

6.  Virus Metagenomics in Farm Animals: A Systematic Review.

Authors:  Kirsty T T Kwok; David F Nieuwenhuijse; My V T Phan; Marion P G Koopmans
Journal:  Viruses       Date:  2020-01-16       Impact factor: 5.048
  6 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.