Literature DB >> 28756020

Identification and characterization of the tyrosinase gene (TYR) and its transcript variants (TYR_1 and TYR_2) in the crab-eating macaque (Macaca fascicularis).

Young-Hyun Kim1, Sang-Je Park2, Se-Hee Choe1, Ja-Rang Lee2, Hyeon-Mu Cho1, Sun-Uk Kim1, Ji-Su Kim1, Bo-Woong Sim2, Bong-Seok Song2, Youngjeon Lee1, Yeung Bae Jin2, Jung-Joo Hong2, Kang-Jin Jeong2, Philyong Kang2, Seung-Ho Baek2, Sang-Rae Lee1, Jae-Won Huh3, Kyu-Tae Chang4.   

Abstract

Tyrosinase is a copper-containing enzyme that regulates melanin biosynthesis and is encoded by the tyrosinase (TYR) gene. Previous studies demonstrated that mutations in TYR could lead to oculocutaneous albinism type 1 (OCA1) owing to the failure of melanin formation. Although a previous study found that albinism in the rhesus monkey was derived from a mutation in TYR, the identification and characterization of this gene in non-human primates has not been achieved thus far. Thus, using the rapid amplification of cDNA ends (RACE) and internal reverse transcription PCR (RT-PCR) we identified the full-length sequence of TYR in the crab-eating macaque, and two different transcript variants (TYR_1 and TYR_2). While TYR_1 comprised five exons and its coding sequence was highly similar to that of humans, TYR_2 comprised four exons and was generated by a third-exon-skipping event. Interestingly, these two transcripts were also present in the African green monkey (Old World monkey) and the common marmoset (New World monkey). Deduced amino acid sequence analyses revealed that TYR_2 had a shorter C-terminal region than TYR_1 owing to the exon-skipping event. Thus, the present study is the first to identify and characterize a full-length TYR gene in a non-human primate, while the further validation of the third-exon-skipping in TYR indicates that this event is well conserved in the primate lineage. Therefore, this study provides useful and important information for the study of albinism using non-human primate models.
Copyright © 2017 The Authors. Published by Elsevier B.V. All rights reserved.

Entities:  

Keywords:  Albinism; Alternative splicing; Exon skipping; Macaque; Non-human primate; RACE

Mesh:

Substances:

Year:  2017        PMID: 28756020     DOI: 10.1016/j.gene.2017.07.047

Source DB:  PubMed          Journal:  Gene        ISSN: 0378-1119            Impact factor:   3.688


  5 in total

1.  Biallelic mutations in L-dopachrome tautomerase (DCT) cause infantile nystagmus and oculocutaneous albinism.

Authors:  Alexander E Volk; Andrea Hedergott; Meliha Karsak; Christian Kubisch; Markus Preising; Sebastian Rading; Julia Fricke; Peter Herkenrath; Peter Nürnberg; Janine Altmüller; Simon von Ameln; Birgit Lorenz; Antje Neugebauer
Journal:  Hum Genet       Date:  2021-05-06       Impact factor: 4.132

2.  A community-science approach identifies genetic variants associated with three color morphs in ball pythons (Python regius).

Authors:  Autumn R Brown; Kaylee Comai; Dominic Mannino; Haily McCullough; Yamini Donekal; Hunter C Meyers; Chiron W Graves; Hannah S Seidel
Journal:  PLoS One       Date:  2022-10-19       Impact factor: 3.752

3.  Sense-oriented AluYRa1 elements provide a lineage-specific transcription environment for polyadenylation.

Authors:  Hyeon-Mu Cho; Se-Hee Choe; Young-Hyun Kim; Hye-Ri Park; Hee-Eun Lee; Ja-Rang Lee; Sang-Je Park; Jae-Won Huh
Journal:  Sci Rep       Date:  2021-02-11       Impact factor: 4.379

4.  Albino mice with the point mutation at the tyrosinase locus show high cholesterol diet-induced NASH susceptibility.

Authors:  Kaushalya Kulathunga; Arata Wakimoto; Yukiko Hiraishi; Manoj Kumar Yadav; Kyle Gentleman; Eiji Warabi; Tomoki Sakasai; Yoshihiro Miwa; Seiya Mizuno; Satoru Takahashi; Michito Hamada
Journal:  Sci Rep       Date:  2021-11-08       Impact factor: 4.379

5.  Cooperative evolution of two different TEs results in lineage-specific novel transcripts in the BLOC1S2 gene.

Authors:  Hyeon-Mu Cho; Sang-Je Park; Se-Hee Choe; Ja-Rang Lee; Sun-Uk Kim; Yeung-Bae Jin; Ji-Su Kim; Sang-Rae Lee; Young-Hyun Kim; Jae-Won Huh
Journal:  BMC Evol Biol       Date:  2019-10-30       Impact factor: 3.260

  5 in total

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