Literature DB >> 28743640

Structural origins of clustered protocadherin-mediated neuronal barcoding.

Rotem Rubinstein1, Kerry Marie Goodman2, Tom Maniatis3, Lawrence Shapiro4, Barry Honig5.   

Abstract

Clustered protocadherins mediate neuronal self-recognition and non-self discrimination-neuronal "barcoding"-which underpin neuronal self-avoidance in vertebrate neurons. Recent structural, biophysical, computational, and cell-based studies on protocadherin structure and function have led to a compelling molecular model for the barcoding mechanism. Protocadherin isoforms assemble into promiscuous cis-dimeric recognition units and mediate cell-cell recognition through homophilic trans-interactions. Each recognition unit is composed of two arms extending from the membrane proximal EC6 domains. A cis-dimeric recognition unit with each arm coding adhesive trans homophilic specificity can generate a zipper-like assembly that in turn suggests a chain termination mechanism for self-vs-non-self-discrimination among vertebrate neurons.
Copyright © 2017 Elsevier Ltd. All rights reserved.

Entities:  

Keywords:  Cell-cell recognition; Clustered protocadherins; Crystal structure; Neuronal self-avoidance; Protein interaction specificity

Mesh:

Substances:

Year:  2017        PMID: 28743640      PMCID: PMC5582985          DOI: 10.1016/j.semcdb.2017.07.023

Source DB:  PubMed          Journal:  Semin Cell Dev Biol        ISSN: 1084-9521            Impact factor:   7.727


  70 in total

1.  Interaction with protocadherin-gamma regulates the cell surface expression of protocadherin-alpha.

Authors:  Yoji Murata; Shun Hamada; Hirofumi Morishita; Tetsuji Mutoh; Takeshi Yagi
Journal:  J Biol Chem       Date:  2004-09-03       Impact factor: 5.157

2.  Combinatorial homophilic interaction between gamma-protocadherin multimers greatly expands the molecular diversity of cell adhesion.

Authors:  Dietmar Schreiner; Joshua A Weiner
Journal:  Proc Natl Acad Sci U S A       Date:  2010-08-02       Impact factor: 11.205

3.  Monoallelic yet combinatorial expression of variable exons of the protocadherin-alpha gene cluster in single neurons.

Authors:  Shigeyuki Esumi; Naoki Kakazu; Yusuke Taguchi; Teruyoshi Hirayama; Ayako Sasaki; Takahiro Hirabayashi; Tsuyoshi Koide; Takashi Kitsukawa; Shun Hamada; Takeshi Yagi
Journal:  Nat Genet       Date:  2005-01-09       Impact factor: 38.330

4.  Molecular logic of neuronal self-recognition through protocadherin domain interactions.

Authors:  Rotem Rubinstein; Chan Aye Thu; Kerry Marie Goodman; Holly Noelle Wolcott; Fabiana Bahna; Seetha Mannepalli; Goran Ahlsen; Maxime Chevee; Adnan Halim; Henrik Clausen; Tom Maniatis; Lawrence Shapiro; Barry Honig
Journal:  Cell       Date:  2015-10-17       Impact factor: 41.582

5.  Two-step adhesive binding by classical cadherins.

Authors:  Oliver J Harrison; Fabiana Bahna; Phini S Katsamba; Xiangshu Jin; Julia Brasch; Jeremie Vendome; Goran Ahlsen; Kilpatrick J Carroll; Stephen R Price; Barry Honig; Lawrence Shapiro
Journal:  Nat Struct Mol Biol       Date:  2010-02-28       Impact factor: 15.369

6.  Elephant shark sequence reveals unique insights into the evolutionary history of vertebrate genes: A comparative analysis of the protocadherin cluster.

Authors:  Wei-Ping Yu; Vikneswari Rajasegaran; Kenneth Yew; Wai-Lin Loh; Boon-Hui Tay; Chris T Amemiya; Sydney Brenner; Byrappa Venkatesh
Journal:  Proc Natl Acad Sci U S A       Date:  2008-03-04       Impact factor: 11.205

7.  Molecular codes for neuronal individuality and cell assembly in the brain.

Authors:  Takeshi Yagi
Journal:  Front Mol Neurosci       Date:  2012-04-12       Impact factor: 5.639

8.  The γ-Protocadherin-C3 isoform inhibits canonical Wnt signalling by binding to and stabilizing Axin1 at the membrane.

Authors:  Kar Men Mah; Douglas W Houston; Joshua A Weiner
Journal:  Sci Rep       Date:  2016-08-17       Impact factor: 4.379

9.  Distinct and Cooperative Functions for the Protocadherin-α, -β and -γ Clusters in Neuronal Survival and Axon Targeting.

Authors:  Sonoko Hasegawa; Makiko Kumagai; Mitsue Hagihara; Hiroshi Nishimaru; Keizo Hirano; Ryosuke Kaneko; Atsushi Okayama; Teruyoshi Hirayama; Makoto Sanbo; Masumi Hirabayashi; Masahiko Watanabe; Takahiro Hirabayashi; Takeshi Yagi
Journal:  Front Mol Neurosci       Date:  2016-12-23       Impact factor: 5.639

10.  Structure of a force-conveying cadherin bond essential for inner-ear mechanotransduction.

Authors:  Marcos Sotomayor; Wilhelm A Weihofen; Rachelle Gaudet; David P Corey
Journal:  Nature       Date:  2012-11-07       Impact factor: 49.962

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  20 in total

1.  Visualization of clustered protocadherin neuronal self-recognition complexes.

Authors:  Julia Brasch; Kerry M Goodman; Alex J Noble; Micah Rapp; Seetha Mannepalli; Fabiana Bahna; Venkata P Dandey; Tristan Bepler; Bonnie Berger; Tom Maniatis; Clinton S Potter; Bridget Carragher; Barry Honig; Lawrence Shapiro
Journal:  Nature       Date:  2019-04-10       Impact factor: 49.962

2.  Combinatorial Effects of Alpha- and Gamma-Protocadherins on Neuronal Survival and Dendritic Self-Avoidance.

Authors:  Samantha Ing-Esteves; Dimitar Kostadinov; Julie Marocha; Anson D Sing; Kezia S Joseph; Mallory A Laboulaye; Joshua R Sanes; Julie L Lefebvre
Journal:  J Neurosci       Date:  2018-02-08       Impact factor: 6.167

3.  Expression of protocadherin-γC4 protein in the rat brain.

Authors:  Celia P Miralles; Michael J Taylor; John Bear; Christopher D Fekete; Shanu George; Yanfang Li; Bevan Bonhomme; Tzu-Ting Chiou; Angel L De Blas
Journal:  J Comp Neurol       Date:  2019-11-06       Impact factor: 3.215

4.  Collective mechanical responses of cadherin-based adhesive junctions as predicted by simulations.

Authors:  Brandon L Neel; Collin R Nisler; Sanket Walujkar; Raul Araya-Secchi; Marcos Sotomayor
Journal:  Biophys J       Date:  2022-02-10       Impact factor: 4.033

5.  The evolution of synaptic and cognitive capacity: Insights from the nervous system transcriptome of Aplysia.

Authors:  Joshua Orvis; Caroline B Albertin; Pragya Shrestha; Shuangshuang Chen; Melanie Zheng; Cheyenne J Rodriguez; Luke J Tallon; Anup Mahurkar; Aleksey V Zimin; Michelle Kim; Kelvin Liu; Eric R Kandel; Claire M Fraser; Wayne Sossin; Thomas W Abrams
Journal:  Proc Natl Acad Sci U S A       Date:  2022-07-08       Impact factor: 12.779

6.  On the formation of ordered protein assemblies in cell-cell interfaces.

Authors:  Nadir Boni; Lawrence Shapiro; Barry Honig; Yinghao Wu; Rotem Rubinstein
Journal:  Proc Natl Acad Sci U S A       Date:  2022-08-15       Impact factor: 12.779

Review 7.  Adhesion-Based Self-Organization in Tissue Patterning.

Authors:  Tony Y-C Tsai; Rikki M Garner; Sean G Megason
Journal:  Annu Rev Cell Dev Biol       Date:  2022-05-13       Impact factor: 11.902

Review 8.  The role of clustered protocadherins in neurodevelopment and neuropsychiatric diseases.

Authors:  Erin Flaherty; Tom Maniatis
Journal:  Curr Opin Genet Dev       Date:  2020-07-14       Impact factor: 5.578

Review 9.  The generation of a protocadherin cell-surface recognition code for neural circuit assembly.

Authors:  Daniele Canzio; Tom Maniatis
Journal:  Curr Opin Neurobiol       Date:  2019-11-08       Impact factor: 6.627

10.  Novel ultra-rare exonic variants identified in a founder population implicate cadherins in schizophrenia.

Authors:  Todd Lencz; Jin Yu; Raiyan Rashid Khan; Erin Flaherty; Shai Carmi; Max Lam; Danny Ben-Avraham; Nir Barzilai; Susan Bressman; Ariel Darvasi; Judy H Cho; Lorraine N Clark; Zeynep H Gümüş; Joseph Vijai; Robert J Klein; Steven Lipkin; Kenneth Offit; Harry Ostrer; Laurie J Ozelius; Inga Peter; Anil K Malhotra; Tom Maniatis; Gil Atzmon; Itsik Pe'er
Journal:  Neuron       Date:  2021-03-22       Impact factor: 17.173

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