| Literature DB >> 28743242 |
Dan-Juan Li1, Dong Xiao2.
Abstract
BACKGROUND: Base excision repair (BER) pathway is a DNA repair pathway that is important in carcinogenesis and in response to DNA-damaging chemotherapy. XRCC1 is one of important molecular markers for BER. So far, the role of XRCC1 polymorphisms with clinical outcomes of advanced NSCLC treated with platinum-based chemotherapy is inconclusive. To explore the relationship between XRCC1 polymorphisms and platinum-based chemotherapy in advanced NSCLC patients, we performed this meta-analysis.Entities:
Keywords: Lung cancer; Meta-analysis; Platinum; Polymorphism; XRCC1
Mesh:
Substances:
Year: 2017 PMID: 28743242 PMCID: PMC5526237 DOI: 10.1186/s12885-017-3487-y
Source DB: PubMed Journal: BMC Cancer ISSN: 1471-2407 Impact factor: 4.430
Fig. 1Literature search and selection of included studies
Main characteristics of studies included in this meta-analysis
| Study | Year | Country | Ethnicity | Case No. | Genotyping method | Stage | Treatment Response (Genotype distribution) | Outcome | SNPs of XRCC1 | HWE | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| XRCC1 Arg399Gln | XRCC1 Arg194Trp | ||||||||||||||||||||
| CR + PR | SD + PD | CR + PR | SD + PD | ||||||||||||||||||
| GG | GA | AA | GG | GA | AA | CC | CT | TT | CC | CT | TT | ||||||||||
| Peng [ | 2014 | China | Asian | 235 | PCR-CTTP | IIIA-IV | 40 | 41 | 3 | 71 | 74 | 6 | − | − | − | − | − | − | TR/OS/PFS | Arg399Gln | <0.005 |
| Zhang [ | 2014 | China | Asian | 375 | Sequenom MassARRAY | IIIA-IV | 49 | 54 | 24 | 125 | 94 | 29 | 60 | 44 | 23 | 118 | 90 | 41 | TR/OS/PFS | Arg194Trp Arg399Gln | <0.05 |
| Lee [ | 2013 | S. Korea | Asian | 382 | Sequenome mass spectrometry-based genotyping assay | III-IV | 110 | 64 | 5 | 100 | 75 | 16 | − | − | − | − | − | − | TR/OS | Arg399Gln | >0.05 |
| Tiseo [ | 2013 | Italy | Caucasian | 93 | TaqMan | IIIB-IV | 14 | 4 | 27 | 2 | − | − | − | − | − | − | TR/OS | Arg399Gln | − | ||
| Zhao [ | 2013 | China | Asian | 147 | TaqMan allelic discrimination assay | IIIA-IV | 21 | 24 | 8 | 56 | 31 | 5 | 32 | 20 | 1 | 51 | 35 | 6 | TR/OS/PFS | Arg194Trp Arg399Gln | >0.05 |
| Li [ | 2012 | China | Asian | 89 | PCR-RFLP | IIIA-IV | 20 | 6 | 24 | 39 | − | − | − | − | − | − | TR | Arg399Gln | − | ||
| Liao 1[20] | 2012 | Taiwan | Asian | 62 | SNPstream UHT | IIIB-IV | 9 | 9 | 1 | 17 | 22 | 4 | − | − | − | − | − | − | TR/OS | Arg399Gln | >0.05 |
| Liao 2[20] | 2012 | Taiwan | Asian | 45 | SNPstream UHT | IIIB-IV | − | − | − | − | − | − | − | − | − | − | − | − | OS | Arg399Gln | >0.05 |
| Joerger [ | 2012 | Netherlands | Caucasian | 131 | BigDye Terminator Cycle Sequencing Ready Reaction Kit | IIIB-IV | 17 | 18 | 5 | 34 | 45 | 12 | − | − | − | − | − | − | TR/OS/PFS | Arg399Gln | >0.05 |
| Xu [ | 2011 | China | Asian | 130 | PCR-RFLP | IIIB-IV | 30 | 14 | 0 | 36 | 40 | 10 | 12 | 14 | 18 | 42 | 26 | 18 | TR | Arg194Trp Arg399Gln | >0.05 |
| Zhou [ | 2011 | China | Asian | 111 | PCR-RFLP | IV | 29 | 6 | 42 | 34 | − | − | − | − | − | − | TR/TTP | Arg399Gln | − | ||
| Yuan [ | 2010 | China | Asian | 199 | PCR-RFLP | IIIA-IV |
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| − | − | − | − | − | − | OS/PFS | Arg194Trp Arg399Gln | − |
| Hong [ | 2009 | China | Asian | 164 | PCR-RFLP | III-IV | 26 | 28 | 3 | 44 | 53 | 10 | 19 | 31 | 7 | 54 | 42 | 11 | TR | Arg194Trp Arg399Gln | >0.05 |
| Kalikaki [ | 2009 | Greece | Caucasian | 119 | PCR-RFLP | IIIA-IV | 11 | 26 | 21 | 60 | − | − | − | − | − | − | TR/OS | Arg399Gln | − | ||
| Sun [ | 2009 | China | Asian | 87 | 3D DNA microarray | IV | 14 | 8 | 1 | 39 | 22 | 3 | 8 | 18 | 5 | 31 | 19 | 6 | TR | Arg194Trp Arg399Gln | >0.05 |
| Yao [ | 2009 | China | Asian | 102 | PCR-RFLP | IIIB-IV | 13 | 9 | 32 | 48 | − | − | − | − | − | − | TR/OS | Arg399Gln | − | ||
| De las Penas R. [ | 2006 | Spain | Caucasian | 135 | allelic discrimination assay | IIIB-IV | - | − | − | − | − | − | − | − | − | − | − | − | OS | Arg399Gln | − |
| Yuan [ | 2006 | China | Asian | 200 | PCR-RFLP | Advanced | 24 | 38 | 10 | 69 | 46 | 13 | TR | Arg194Trp | >0.05 | ||||||
| Gurubhagavatula [ | 2004 | USA | Caucasian | 103 | PCR-RFLP | IIIA-IV | - | − | − | − | − | − | − | − | − | − | − | − | OS | Arg399Gln | - |
| Wang [ | 2004 | China | Asian | 105 | PCR-RFLP | IIIB-IV | 22 | 9 | 2 | 31 | 33 | 8 | 11 | 19 | 3 | 43 | 18 | 11 | TR | Arg194Trp Arg399Gln | >0.05 |
Footnote: TR treatment response, OS overall survival, PFS progression free survival, CR complete response, PR partial response, SD stable disease, PD progressive disease, SNPs single nucleotide polymorphisms, XRCC1 X-ray repair cross-complementing protein 1, HWE Hardy-Weinberg equilibrium, G = Arg, A = Gln, C = Arg, T = Trp
Fig. 2Forest plots of XRCC1 Arg194Trp polymorphisms and objective response in platinum-based chemotherapy by different allele contrast models. a homozygous model, b recessive model, c allele comparison. An OR >1 (or <1) indicates that the 194Arg is more (or less) likely to show response than 194Trp
The association between XRCC1 Arg194Trp and Arg399Gln polymorphisms and objective response, OS and PFS
| XRCC1 | Objective response | Overall survival | Progression-free survival | ||||||
|---|---|---|---|---|---|---|---|---|---|
| Studies(refs.) | Pooled OR | Ph / | Studies(refs.) | Pooled HR | Ph / | Studies(refs.) | Pooled HR | Ph / | |
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| |||||||||
| ArgArg vs. TrpTrp | |||||||||
| All | 7 [13–16, 23, 26, 27] |
| 0.19/31.1 | 3 [23, 26, 31] | 1.19(0.73–1.65) | 0.92/0.0 | 3 [23, 26, 31] | 1.28(0.74–1.82) | 0.92/0.0 |
| Sample size>100 | 6 [13–16, 23, 26] |
| 0.17/35.4 | 3 [23, 26, 31] | 1.19(0.73–1.65) | 0.92/0.0 | 3 [23, 26, 31] | 1.28(0.74–1.82) | 0.92/0.0 |
| Year ≥ 2009 | 5 [13, 14, 23, 26, 27] |
| 0.09/49.8 | 3 [23, 26, 31] | 1.19(0.73–1.65) | 0.92/0.0 | 3 [23, 26, 31] | 1.28(0.74–1.82) | 0.92/0.0 |
| TrpArg vs. TrpTrp | |||||||||
| All | 7 [13–16, 23, 26, 27] | 1.05(0.73–1.51) | 0.35/10.8 | - | - | - | - | - | - |
| Sample size>100 | 6 [13–16, 23, 26] | 1.04(0.71–1.52) | 0.24/25.4 | - | - | - | - | - | - |
| Year ≥ 2009 | 5 [13, 14, 23, 26, 27] | 0.91(0.60–1.39) | 0.56/0.0 | - | - | - | - | - | - |
| ArgArg + TrpArg vs. TrpTrp | |||||||||
| All | 7 [13–16, 23, 26, 27] | 0.79(0.56–1.11) | 0.32/13.9 | 1 [26] | - | - | 1 [26] | - | - |
| Sample size>100 | 6 [13–16, 23, 26] | 0.80(0.57–1.14) | 0.23/27.1 | 1 ([ | - | - | 1 [26] | - | - |
| Year ≥ 2009 | 5 [13, 14, 23, 26, 27] | 0.75(0.51–1.10) | 0.26/24.6 | 1 ([ | - | - | 1 [26] | - | - |
| ArgArg vs. TrpArg + TrpTrp | |||||||||
| All | 7 [13–16, 23, 26, 27] |
| 0.01/63.0 | 3 [23, 26, 31] | 1.07(0.79–1.35) | 0.79/0.0 | 3 [23, 26, 31] | 0.94(0.72–1.17) | 0.648/0.0 |
| Sample size>100 | 6 [13–16, 23, 26] |
| 0.02/62.7 | 3 [23, 26, 31] | 1.07(0.79–1.35) | 0.79/0.0 | 3 [23, 26, 31] | 0.94(0.72–1.17) | 0.648/0.0 |
| Year ≥ 2009 | 5 [13, 14, 23, 26, 27] | 0.63(0.37–1.05) | 0.02/65.9 | 3 [23, 26, 31] | 1.07(0.79–1.35) | 0.79/0.0 | 3 [23, 26, 31] | 0.94(0.72–1.17) | 0.648/0.0 |
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| |||||||||
| GlnGln vs. ArgArg | |||||||||
| All | 10 [13–15, 17, 20, 22–24, 26, 27] | 0.77(0.38–1.57) | 0.005/62.0 | 7 [17, 19, 22–24, 28, 31] | 1.15(0.61–1.69) | 0.006/66.6 | 5 [17, 22, 23, 26, 31] |
| 0.136/42.9 |
| Sample size>100 | 8 [13–15, 17, 22–24, 26] | 0.77(0.35–1.73) | 0.002/69.9 | 7 [17, 19, 22–24, 28, 31] | 1.15(0.61–1.69) | 0.006/66.6 | 5 [17, 22, 23, 26, 31] |
| 0.136/42.9 |
| Asian | 9 [13–15, 17, 20, 23, 24, 26, 27] | 0.75(0.33–1.68) | 0.003/66.1 | 4 [17, 23, 24, 31] | 0.86(0.41–1.30) | 0.052/61.2 | 4 [17, 23, 26, 31] |
| 0.106/51.0 |
| Caucasian | 1 [22] | - | - | 3 [19, 22, 28] |
| 0.423/0.0 | 1 [22] | - | - |
| Year ≥ 2009 | 9 [13, 14, 17, 22–24, 26, 27] | 0.83(0.39–1.77) | 0.005/63.5 | 6 [17, 19, 22–24, 31] | 1.06(0.54–1.57) | 0.011/66.2 | 5 [17, 22, 23, 26, 31] |
| 0.136/42.9 |
| GlnArg vs. ArgArg | |||||||||
| All | 10 [13–15, 17, 20, 22–24, 26, 27] | 0.90(0.67–1.21) | 0.053/46.2 | 7 [17, 19, 23–25, 28, 31] | 0.93(0.68–1.18) | 0.003/69.3 | 4 [17, 23, 26, 31] | 0.96(0.79–1.14) | 0.416/0.0 |
| Sample size>100 | 8 [13–15, 17, 22–24, 26] | 0.89(0.63–1.26) | 0.02/57.8 | 7 [17, 19, 23–25, 28, 31] | 0.93(0.68–1.18) | 0.003/69.3 | 4 [17, 23, 26, 31] | 0.96(0.79–1.14) | 0.416/0.0 |
| Asian | 9 [13–15, 17, 20, 23, 24, 26, 27] | 0.90(0.65–1.25) | 0.035/51.8 | 4 [17, 23, 24, 31] | 0.91(0.56–1.27) | 0.003/78.1 | 4 [17, 23, 26, 31] | 0.96(0.79–1.14) | 0.416/0.0 |
| Caucasian | 1 [22] | - | - | 3 [19, 25, 28] | 1.01(0.51–1.51) | 0.057/65.2 | - | - | - |
| Year ≥ 2009 | 9 [13, 14, 17, 22–24, 26, 27] | 0.97(0.79–1.20) | 0.112/38.4 | 5 [17, 19, 23, 24, 31] | 0.97(0.64–1.31) | 0.003/74.7 | 4 [17, 23, 26, 31] | 0.96(0.79–1.14) | 0.416/0.0 |
| GlnGln + GlnArg vs. ArgArg | |||||||||
| All | 13 [13–15, 17–24, 26, 27] | 0.72(0.50–1.04) | 0.000/70.9 | 6 [17, 19, 20, 23, 26, 31] | 0.73(0.50–1.05) | 0.001/72.5 | 4 [17, 23, 26, 31] | 0.94(0.77–1.10) | 0.274/22.8 |
| Sample size>100 | 10 [13–15, 17, 19, 21–24, 26] | 0.78(0.53–1.16) | 0.000/72.5 | 5 [17, 19, 23, 26, 31] | 0.85(0.55–1.15) | 0.02/65.9 | 4 [17, 23, 26, 31] | 0.94(0.77–1.10) | 0.274/22.8 |
| Asian | 11 [13–15, 17, 18, 20, 21, 23, 24, 26, 27] | 0.70(0.46–1.07) | 0.000/75.7 | 5 [17, 20, 23, 26, 31] |
| 0.003/71.7 | 4 [17, 23, 26, 31] | 0.94(0.77–1.10) | 0.274/22.8 |
| Caucasian | 2 [19, 22] | 0.82(0.46–1.44) | 0.966/0.0 | 1 [19] | - | - | - | - | - |
| Year ≥ 2009 | 12 [13, 14, 17–24, 26, 27] | 0.93(0.65–1.34) | 0.004/64.3 | 6 [17, 19, 20, 23, 26, 31] | 0.73(0.50–1.05) | 0.001/72.5 | 4 [17, 23, 26, 31] | 0.94(0.77–1.10) | 0.274/22.8 |
| GlnGln vs. GlnArg + ArgArg | |||||||||
| All | 12 [13–15, 17, 20, 22–24, 26, 27, 29, 30] | 0.85(0.50–1.45) | 0.028/49.0 | 5 [19, 24, 26, 29, 30] | 1.19(0.53–1.84) | 0.01/68.9 | 2 [26, 30] | 0.94(0.37–1.52) | 0.435/0.0 |
| Sample size>100 | 9 [13–15, 17, 22–24, 26, 29] | 0.78(0.43–1.41) | 0.015/58.0 | 4 [19, 24, 26, 29] |
| 0.686/0.0 | 1 [26] | - | - |
| Asian | 10 [13–15, 17, 20, 23, 24, 26, 27, 29] | 0.75(0.41–1.37) | 0.023/53.4 | 3 [24, 26, 29] | 1.40(0.96–1.84) | 0.999/0.0 | 1 [26] | - | - |
| Caucasian | 2 [22, 30] | 1.58(0.42–5.98) | 0.194/40.6 | 2 [19, 30] | 1.43(−1.05–3.91) | 0.058/72.1 | 1 [30] | - | - |
| Year ≥ 2009 | 11 [13, 14, 17, 20, 22–24, 26, 27, 29, 30] | 0.87(0.47–1.62) | 0.038/51.0 | 5 [19, 24, 26, 29, 30] | 1.19(0.53–1.84) | 0.01/68.9 | 2 [26, 30] | 0.94(0.37–1.52) | 0.435/0.0 |
Footnote: OR odds ratio, HR hazard ratio, refs references, OR/HR with the corresponding 95% CIs >/<1 means significance
Fig. 3Forest plots of XRCC1 Arg399Gln polymorphisms and clinical outcomes in platinum-based chemotherapy. a Dominant model of association between 399Gln and objective response relative to 399Arg; An OR >1 (or <1) indicates that the 399Gln is more (or less) likely to show response than 399Arg. b Homozygous model of association between 399Gln and overall survival relative to 399Arg; An HR > 1 (or <1) indicates that the 399Gln is more (or less) likely to show worse overall survival than 399Arg. c Homozygous model of association between 399Gln and progression free survival relative to 399Arg. An HR > 1 (or <1) indicates that the 399Gln is more (or less) likely to show worse progression free survival than 399Arg
Fig. 4Begg’s funnel plot for publication bias test.Homozygous model of association between XRCC1 Arg194Trp and objective response (ArgArg vs TrpTrp); a Homozygous model of association between XRCC1 Arg399Gln and objective response (GlnGln vs ArgArg); b Homozygous model of association between XRCC1 Arg399Gln and overall survival (GlnGln vs ArgArg); c Homozygous model of association between XRCC1 Arg399Gln and PFS (GlnGln vs ArgArg)