Literature DB >> 28741514

Implications of Tumor Clonal Heterogeneity in the Era of Next-Generation Sequencing.

Meagan A Jacoby1, Eric J Duncavage2, Matthew J Walter3.   

Abstract

Recent whole-genome sequencing (WGS) studies have demonstrated that tumors typically comprise a founding clone and multiple subclones (i.e., clonal heterogeneity is common). The possible combination of mutations in each tumor clone is enormous, making each tumor genetically unique. Clonal heterogeneity likely has a role in cancer progression, relapse, metastasis, and chemoresistance due to functional differences in genetically unique subclones. In current clinical practice, gene mutations are only classified as being present or absent, ignoring the clonal complexity of cancers. In this review, we address how tumor clonality is measured using next-generation sequencing (NGS) data, highlight that clonal heterogeneity is common across multiple tumor types, and discuss the potential clinical implications of tumor clonal heterogeneity.
Copyright © 2015 Elsevier Inc. All rights reserved.

Entities:  

Year:  2015        PMID: 28741514     DOI: 10.1016/j.trecan.2015.10.006

Source DB:  PubMed          Journal:  Trends Cancer        ISSN: 2405-8025


  10 in total

1.  Subclones dominate at MDS progression following allogeneic hematopoietic cell transplant.

Authors:  Meagan A Jacoby; Eric J Duncavage; Gue Su Chang; Christopher A Miller; Jin Shao; Kevin Elliott; Joshua Robinson; Robert S Fulton; Catrina C Fronick; Michelle O'Laughlin; Sharon E Heath; Iskra Pusic; John S Welch; Daniel C Link; John F DiPersio; Peter Westervelt; Timothy J Ley; Timothy A Graubert; Matthew J Walter
Journal:  JCI Insight       Date:  2018-03-08

Review 2.  Genetics of progression from MDS to secondary leukemia.

Authors:  Andrew J Menssen; Matthew J Walter
Journal:  Blood       Date:  2020-07-02       Impact factor: 22.113

Review 3.  Cancer systems immunology.

Authors:  Nathan E Reticker-Flynn; Edgar G Engleman
Journal:  Elife       Date:  2020-07-13       Impact factor: 8.140

4.  Reliability of algorithmic somatic copy number alteration detection from targeted capture data.

Authors:  Nora Rieber; Regina Bohnert; Ulrike Ziehm; Gunther Jansen
Journal:  Bioinformatics       Date:  2017-09-15       Impact factor: 6.937

Review 5.  Recent Advances in Prostate Cancer Treatment and Drug Discovery.

Authors:  Ekaterina Nevedomskaya; Simon J Baumgart; Bernard Haendler
Journal:  Int J Mol Sci       Date:  2018-05-04       Impact factor: 5.923

Review 6.  Cancer stem cell mobilization and therapeutic targeting of the 5T4 oncofetal antigen.

Authors:  Richard Harrop; Eric O'Neill; Peter L Stern
Journal:  Ther Adv Vaccines Immunother       Date:  2019-01-25

7.  Comprehensive benchmarking of SNV callers for highly admixed tumor data.

Authors:  Regina Bohnert; Sonia Vivas; Gunther Jansen
Journal:  PLoS One       Date:  2017-10-11       Impact factor: 3.240

8.  Identification of circulating tumor DNA using a targeted 545-gene next generation sequencing panel in patients with gastric cancer.

Authors:  Jing Lan; Yaping Lu; Yanfang Guan; Lianpeng Chang; Zhengyuan Yu; Haixin Qian
Journal:  Oncol Lett       Date:  2020-01-16       Impact factor: 2.967

9.  Association of metabolic and genetic heterogeneity in head and neck squamous cell carcinoma with prognostic implications: integration of FDG PET and genomic analysis.

Authors:  Jinyeong Choi; Jeong-An Gim; Chiwoo Oh; Seunggyun Ha; Howard Lee; Hongyoon Choi; Hyung-Jun Im
Journal:  EJNMMI Res       Date:  2019-11-21       Impact factor: 3.138

10.  Clonal relationship of synchronous head and neck cancer and esophageal cancer assessed by single nucleotide polymorphism-based loss of heterozygosity analysis.

Authors:  Somkiat Sunpaweravong; Sacarin Bunbanjerdsuk; Tanjitti Pongrujikorn; Chaiwat Naktang; Patrapim Sunpaweravong; Anupong Nitiruangjaras; Tanadech Dechaphankul; Natini Jinawath
Journal:  BMC Cancer       Date:  2019-12-03       Impact factor: 4.430

  10 in total

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