Literature DB >> 28735432

Eucalyptol, sabinene and cinnamaldehyde: potent inhibitors of salmonella target protein L-asparaginase.

Archana Vimal1, Dharm Pal2, Timir Tripathi3, Awanish Kumar4.   

Abstract

Salmonella typhimurium is a severe threat to human life. The treatment became more difficult with the emergence of multidrug resistance. In the present in silico study, a novel drug target L-asparaginase was tested against three ligands eucalyptol, sabinene, and cinnamaldehyde, major components of cardamom, nutmeg, and cinnamon, respectively. The lowest docking score was obtained for sabinene followed by eucalyptol and cinnamaldehyde i.e. -5.648, -3.939 and -3.469. The docking score of sabinene is also better than the standard drug, Ciprofloxacin (-4.661) and natural substrate L-asparagine (-5.497). The amino acid residues involved in interactions inside the binding pocket are threonine 115 and threonine 35. The ADMET profile studied, also suggests the potency of the test ligands as a drug candidate. The results suggest they could be safe alternatives of chemical compounds to treat infections and combat multidrug-resistant bacteria.

Entities:  

Keywords:  Antimicrobial; L-Asparaginase; Pathogenicity; S. typhimurium; Spices

Year:  2017        PMID: 28735432      PMCID: PMC5522654          DOI: 10.1007/s13205-017-0891-6

Source DB:  PubMed          Journal:  3 Biotech        ISSN: 2190-5738            Impact factor:   2.406


  15 in total

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Authors:  Richard A Friesner; Jay L Banks; Robert B Murphy; Thomas A Halgren; Jasna J Klicic; Daniel T Mainz; Matthew P Repasky; Eric H Knoll; Mee Shelley; Jason K Perry; David E Shaw; Perry Francis; Peter S Shenkin
Journal:  J Med Chem       Date:  2004-03-25       Impact factor: 7.446

Review 2.  A Comprehensive Review on L-Asparaginase and Its Applications.

Authors:  Tahira Batool; Essam A Makky; Muna Jalal; Mashitah M Yusoff
Journal:  Appl Biochem Biotechnol       Date:  2015-11-07       Impact factor: 2.926

3.  Extra precision glide: docking and scoring incorporating a model of hydrophobic enclosure for protein-ligand complexes.

Authors:  Richard A Friesner; Robert B Murphy; Matthew P Repasky; Leah L Frye; Jeremy R Greenwood; Thomas A Halgren; Paul C Sanschagrin; Daniel T Mainz
Journal:  J Med Chem       Date:  2006-10-19       Impact factor: 7.446

4.  New method for fast and accurate binding-site identification and analysis.

Authors:  Tom Halgren
Journal:  Chem Biol Drug Des       Date:  2007-02       Impact factor: 2.817

5.  Protein and ligand preparation: parameters, protocols, and influence on virtual screening enrichments.

Authors:  G Madhavi Sastry; Matvey Adzhigirey; Tyler Day; Ramakrishna Annabhimoju; Woody Sherman
Journal:  J Comput Aided Mol Des       Date:  2013-04-12       Impact factor: 3.686

6.  L-asparaginase II produced by Salmonella typhimurium inhibits T cell responses and mediates virulence.

Authors:  Amy L Kullas; Michael McClelland; Hee-Jeong Yang; Jason W Tam; AnnMarie Torres; Steffen Porwollik; Patricio Mena; Joseph B McPhee; Lydia Bogomolnaya; Helene Andrews-Polymenis; Adrianus W M van der Velden
Journal:  Cell Host Microbe       Date:  2012-12-13       Impact factor: 21.023

7.  Structural and functional insights into Erwinia carotovora L-asparaginase.

Authors:  Anastassios C Papageorgiou; Galina A Posypanova; Charlotta S Andersson; Nikolay N Sokolov; Julya Krasotkina
Journal:  FEBS J       Date:  2008-07-21       Impact factor: 5.542

8.  Antimicrobial activity of the bioactive components of essential oils from Pakistani spices against Salmonella and other multi-drug resistant bacteria.

Authors:  Rasheeha Naveed; Iftikhar Hussain; Abdul Tawab; Muhammad Tariq; Moazur Rahman; Sohail Hameed; M Shahid Mahmood; Abu Baker Siddique; Mazhar Iqbal
Journal:  BMC Complement Altern Med       Date:  2013-10-14       Impact factor: 3.659

9.  Complete Genome Sequence of Salmonella enterica Serovar Typhimurium Strain YU15 (Sequence Type 19) Harboring the Salmonella Genomic Island 1 and Virulence Plasmid pSTV.

Authors:  Claudia Silva; Edmundo Calva; José L Puente; Mussaret B Zaidi; Pablo Vinuesa
Journal:  Genome Announc       Date:  2016-04-14

10.  Effect of essential oils on pathogenic bacteria.

Authors:  Filomena Nazzaro; Florinda Fratianni; Laura De Martino; Raffaele Coppola; Vincenzo De Feo
Journal:  Pharmaceuticals (Basel)       Date:  2013-11-25
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  3 in total

1.  Chemical Composition, Phytotoxic, Antimicrobial and Insecticidal Activity of the Essential Oils of Dracocephalum integrifolium.

Authors:  Shixing Zhou; Caixia Wei; Chi Zhang; Caixia Han; Nigora Kuchkarova; Hua Shao
Journal:  Toxins (Basel)       Date:  2019-10-13       Impact factor: 4.546

2.  Computational analysis of eugenol inhibitory activity in lipoxygenase and cyclooxygenase pathways.

Authors:  Francisco das Chagas Pereira de Andrade; Anderson Nogueira Mendes
Journal:  Sci Rep       Date:  2020-10-01       Impact factor: 4.379

3.  In Vitro Pharmacological Screening of Essential Oils from Baccharis parvidentata and Lippia origanoides Growing in Brazil.

Authors:  Wilmer H Perera; Alexander M Scherbakov; Galina I Buravchenko; Ekaterina I Mikhaevich; Suzana Guimarães Leitão; Paul Cos; Andrey E Shchekotikhin; Lianet Monzote; William N Setzer
Journal:  Molecules       Date:  2022-03-16       Impact factor: 4.411

  3 in total

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