Literature DB >> 28734135

Folding while bound to chaperones.

Scott Horowitz1, Philipp Koldewey2, Frederick Stull3, James Ca Bardwell4.   

Abstract

Chaperones are important in preventing protein aggregation and aiding protein folding. How chaperones aid protein folding remains a key question in understanding their mechanism. The possibility of proteins folding while bound to chaperones was reintroduced recently with the chaperone Spy, many years after the phenomenon was first reported with the chaperones GroEL and SecB. In this review, we discuss the salient features of folding while bound in the cases for which it has been observed and speculate about its biological importance and possible occurrence in other chaperones.
Copyright © 2017 Elsevier Ltd. All rights reserved.

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Year:  2017        PMID: 28734135      PMCID: PMC5775065          DOI: 10.1016/j.sbi.2017.06.009

Source DB:  PubMed          Journal:  Curr Opin Struct Biol        ISSN: 0959-440X            Impact factor:   6.809


  42 in total

1.  SecB-mediated protein export need not occur via kinetic partitioning.

Authors:  Beena Krishnan; S Rajendra Kulothungan; Ashish K Patra; Jayant B Udgaonkar; Raghavan Varadarajan
Journal:  J Mol Biol       Date:  2008-11-10       Impact factor: 5.469

2.  Confinement and Stabilization of Fyn SH3 Folding Intermediate Mimetics within the Cavity of the Chaperonin GroEL Demonstrated by Relaxation-Based NMR.

Authors:  David S Libich; Vitali Tugarinov; Rodolfo Ghirlando; G Marius Clore
Journal:  Biochemistry       Date:  2017-02-08       Impact factor: 3.162

Review 3.  The chaperone toolbox at the single-molecule level: From clamping to confining.

Authors:  Mario J Avellaneda; Eline J Koers; Mohsin M Naqvi; Sander J Tans
Journal:  Protein Sci       Date:  2017-04-20       Impact factor: 6.725

Review 4.  Breaking on through to the other side: protein export through the bacterial Sec system.

Authors:  Katerina E Chatzi; Marios F Sardis; Spyridoula Karamanou; Anastassios Economou
Journal:  Biochem J       Date:  2013-01-01       Impact factor: 3.857

5.  Mechanisms of oxidant-mediated cell injury. The glycolytic and mitochondrial pathways of ADP phosphorylation are major intracellular targets inactivated by hydrogen peroxide.

Authors:  P A Hyslop; D B Hinshaw; W A Halsey; I U Schraufstätter; R D Sauerheber; R G Spragg; J H Jackson; C G Cochrane
Journal:  J Biol Chem       Date:  1988-02-05       Impact factor: 5.157

6.  Polyphosphate is a primordial chaperone.

Authors:  Michael J Gray; Wei-Yun Wholey; Nico O Wagner; Claudia M Cremers; Antje Mueller-Schickert; Nathaniel T Hock; Adam G Krieger; Erica M Smith; Robert A Bender; James C A Bardwell; Ursula Jakob
Journal:  Mol Cell       Date:  2014-02-20       Impact factor: 17.970

7.  Reshaping of the conformational search of a protein by the chaperone trigger factor.

Authors:  Alireza Mashaghi; Günter Kramer; Philipp Bechtluft; Beate Zachmann-Brand; Arnold J M Driessen; Bernd Bukau; Sander J Tans
Journal:  Nature       Date:  2013-07-07       Impact factor: 49.962

8.  A molecular mechanism of chaperone-client recognition.

Authors:  Lichun He; Timothy Sharpe; Adam Mazur; Sebastian Hiller
Journal:  Sci Adv       Date:  2016-11-16       Impact factor: 14.136

9.  The mechanism of folding of Im7 reveals competition between functional and kinetic evolutionary constraints.

Authors:  Claire T Friel; D Alastair Smith; Michele Vendruscolo; Joerg Gsponer; Sheena E Radford
Journal:  Nat Struct Mol Biol       Date:  2009-03-01       Impact factor: 15.369

10.  Super Spy variants implicate flexibility in chaperone action.

Authors:  Shu Quan; Lili Wang; Evgeniy V Petrotchenko; Karl At Makepeace; Scott Horowitz; Jianyi Yang; Yang Zhang; Christoph H Borchers; James Ca Bardwell
Journal:  Elife       Date:  2014-02-04       Impact factor: 8.140

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  11 in total

Review 1.  Inhibitors and chemical probes for molecular chaperone networks.

Authors:  Jason E Gestwicki; Hao Shao
Journal:  J Biol Chem       Date:  2018-09-13       Impact factor: 5.157

2.  Redox Modification of the Iron-Sulfur Glutaredoxin GRXS17 Activates Holdase Activity and Protects Plants from Heat Stress.

Authors:  Laura Martins; Johannes Knuesting; Laetitia Bariat; Avilien Dard; Sven A Freibert; Christophe H Marchand; David Young; Nguyen Ho Thuy Dung; Wilhelm Voth; Anne Debures; Julio Saez-Vasquez; Stéphane D Lemaire; Roland Lill; Joris Messens; Renate Scheibe; Jean-Philippe Reichheld; Christophe Riondet
Journal:  Plant Physiol       Date:  2020-08-21       Impact factor: 8.340

Review 3.  Chloroplast Chaperonin: An Intricate Protein Folding Machine for Photosynthesis.

Authors:  Qian Zhao; Cuimin Liu
Journal:  Front Mol Biosci       Date:  2018-01-19

4.  Protein folding while chaperone bound is dependent on weak interactions.

Authors:  Kevin Wu; Frederick Stull; Changhan Lee; James C A Bardwell
Journal:  Nat Commun       Date:  2019-10-23       Impact factor: 14.919

5.  Mechanism of the small ATP-independent chaperone Spy is substrate specific.

Authors:  Rishav Mitra; Varun V Gadkari; Ben A Meinen; Carlo P M van Mierlo; Brandon T Ruotolo; James C A Bardwell
Journal:  Nat Commun       Date:  2021-02-08       Impact factor: 14.919

6.  Production of (2S)-sakuranetin from (2S)-naringenin in Escherichia coli by strengthening methylation process and cell resistance.

Authors:  Qiumeng Sun; Song Gao; Shiqin Yu; Pu Zheng; Jingwen Zhou
Journal:  Synth Syst Biotechnol       Date:  2022-08-03

7.  Energy landscape remodeling mechanism of Hsp70-chaperone-accelerated protein folding.

Authors:  Jiajun Lu; Xiaoyi Zhang; Yichao Wu; Yuebiao Sheng; Wenfei Li; Wei Wang
Journal:  Biophys J       Date:  2021-03-19       Impact factor: 4.033

8.  Protein quality control: from mechanism to disease : EMBO Workshop, Costa de la Calma (Mallorca), Spain, April 28 - May 03, 2019.

Authors:  Harm H Kampinga; Matthias P Mayer; Axel Mogk
Journal:  Cell Stress Chaperones       Date:  2019-11-11       Impact factor: 3.667

9.  Identifying dynamic, partially occupied residues using anomalous scattering.

Authors:  Serena Rocchio; Ramona Duman; Kamel El Omari; Vitaliy Mykhaylyk; Christian Orr; Zhen Yan; Loïc Salmon; Armin Wagner; James C A Bardwell; Scott Horowitz
Journal:  Acta Crystallogr D Struct Biol       Date:  2019-11-19       Impact factor: 7.652

10.  Chaperna: linking the ancient RNA and protein worlds.

Authors:  Ahyun Son; Scott Horowitz; Baik L Seong
Journal:  RNA Biol       Date:  2020-08-11       Impact factor: 4.652

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