Literature DB >> 28732269

Gyral net: A new representation of cortical folding organization.

Hanbo Chen1, Yujie Li1, Fangfei Ge1, Gang Li2, Dinggang Shen3, Tianming Liu4.   

Abstract

One distinct feature of the cerebral cortex is its convex (gyri) and concave (sulci) folding patterns. Due to the remarkable complexity and variability of gyral/sulcal shapes, it has been challenging to quantitatively model their organization patterns. Inspired by the observation that the lines of gyral crests can form a connected graph on each brain hemisphere, we propose a new representation of cortical gyri/sulci organization pattern - gyral net, which models cortical architecture from a graph perspective, starting with nodes and edges obtained from the reconstructed cortical surfaces. A novel computational framework is developed to efficiently and automatically construct gyral nets from surface meshes, and four measurements are devised to quantify the folding patterns. Using an MRI dataset for autism study as a test bed, we identified reduced local connectivity cost and increased curviness of gyral net bilaterally on the parietal lobe, occipital lobe, and temporal lobe in autistic patients. Additionally, we found that the cortical thickness and the gyral straightness of gyral joints are higher than the rest of gyral crest regions. The proposed representation offers a new tool for a comprehensive and reliable characterization of the cortical folding organization. This novel computational framework will enable large-scale analyses of cortical folding patterns in the future.
Copyright © 2017 Elsevier B.V. All rights reserved.

Entities:  

Keywords:  Autism; Cortical folding; Gyral net; MRI

Mesh:

Year:  2017        PMID: 28732269      PMCID: PMC5654690          DOI: 10.1016/j.media.2017.07.001

Source DB:  PubMed          Journal:  Med Image Anal        ISSN: 1361-8415            Impact factor:   8.545


  60 in total

1.  Building 3D sulcal models using local geometry.

Authors:  A Caunce; C J Taylor
Journal:  Med Image Anal       Date:  2001-03       Impact factor: 8.545

2.  Cortical sulci recognition and spatial normalization.

Authors:  Matthieu Perrot; Denis Rivière; Jean-François Mangin
Journal:  Med Image Anal       Date:  2011-03-09       Impact factor: 8.545

3.  Quantification and discrimination of abnormal sulcal patterns in polymicrogyria.

Authors:  Kiho Im; Rudolph Pienaar; Michael J Paldino; Nadine Gaab; Albert M Galaburda; P Ellen Grant
Journal:  Cereb Cortex       Date:  2012-09-17       Impact factor: 5.357

4.  APP2: automatic tracing of 3D neuron morphology based on hierarchical pruning of a gray-weighted image distance-tree.

Authors:  Hang Xiao; Hanchuan Peng
Journal:  Bioinformatics       Date:  2013-04-19       Impact factor: 6.937

5.  Cortical gyrification induced by fibroblast growth factor 2 in the mouse brain.

Authors:  Brian G Rash; Simone Tomasi; H David Lim; Carol Y Suh; Flora M Vaccarino
Journal:  J Neurosci       Date:  2013-06-26       Impact factor: 6.167

6.  Automatic cortical sulcal parcellation based on surface principal direction flow field tracking.

Authors:  Gang Li; Lei Guo; Jingxin Nie; Tianming Liu
Journal:  Neuroimage       Date:  2009-03-25       Impact factor: 6.556

7.  Brain size and folding of the human cerebral cortex.

Authors:  Roberto Toro; Michel Perron; Bruce Pike; Louis Richer; Suzanne Veillette; Zdenka Pausova; Tomás Paus
Journal:  Cereb Cortex       Date:  2008-02-10       Impact factor: 5.357

Review 8.  FSL.

Authors:  Mark Jenkinson; Christian F Beckmann; Timothy E J Behrens; Mark W Woolrich; Stephen M Smith
Journal:  Neuroimage       Date:  2011-09-16       Impact factor: 6.556

Review 9.  Autism spectrum disorders--a genetics review.

Authors:  Judith H Miles
Journal:  Genet Med       Date:  2011-04       Impact factor: 8.822

10.  Mechanism of Consistent Gyrus Formation: an Experimental and Computational Study.

Authors:  Tuo Zhang; Mir Jalil Razavi; Xiao Li; Hanbo Chen; Tianming Liu; Xianqiao Wang
Journal:  Sci Rep       Date:  2016-11-17       Impact factor: 4.379

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  6 in total

1.  Identifying Cross-individual Correspondences of 3-hinge Gyri.

Authors:  Tuo Zhang; Ying Huang; Lin Zhao; Zhibin He; Xi Jiang; Lei Guo; Xiaoping Hu; Tianming Liu
Journal:  Med Image Anal       Date:  2020-04-13       Impact factor: 8.545

2.  Exploring 3-hinge gyral folding patterns among HCP Q3 868 human subjects.

Authors:  Tuo Zhang; Hanbo Chen; Mir Jalil Razavi; Yujie Li; Fangfei Ge; Lei Guo; Xianqiao Wang; Tianming Liu
Journal:  Hum Brain Mapp       Date:  2018-06-26       Impact factor: 5.038

3.  Cortical development coupling between surface area and sulcal depth on macaque brains.

Authors:  Xiao Li; Songyao Zhang; Xi Jiang; Shu Zhang; Junwei Han; Lei Guo; Tuo Zhang
Journal:  Brain Struct Funct       Date:  2022-01-06       Impact factor: 3.270

4.  Cortical thickness systematically varies with curvature and depth in healthy human brains.

Authors:  Nagehan Demirci; Maria A Holland
Journal:  Hum Brain Mapp       Date:  2022-01-31       Impact factor: 5.038

Review 5.  "Plis de passage" Deserve a Role in Models of the Cortical Folding Process.

Authors:  Jean-François Mangin; Yann Le Guen; Nicole Labra; Antoine Grigis; Vincent Frouin; Miguel Guevara; Clara Fischer; Denis Rivière; William D Hopkins; Jean Régis; Zhong Yi Sun
Journal:  Brain Topogr       Date:  2019-10-03       Impact factor: 3.020

6.  Cortical 3-hinges could serve as hubs in cortico-cortical connective network.

Authors:  Tuo Zhang; Xiao Li; Xi Jiang; Fangfei Ge; Shu Zhang; Lin Zhao; Huan Liu; Ying Huang; Xianqiao Wang; Jian Yang; Lei Guo; Xiaoping Hu; Tianming Liu
Journal:  Brain Imaging Behav       Date:  2020-12       Impact factor: 3.978

  6 in total

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