Literature DB >> 28729024

Understanding the Genomic Ultraconservations: T-UCRs and Cancer.

Linda Fabris1, George A Calin2.   

Abstract

Transcribed ultraconserved regions (T-UCRs) are genomic regions conserved across large evolutionary distances, which encode for noncoding RNAs that serve as regulators of gene expression. Although T-UCRs have been linked to multiple aspects of mammalian gene regulation, the roles of their extreme evolutionary conservation remain largely unexplained. Growing body of literature is now focusing on T-UCRs as potential cancer biomarkers or as new drug targets. Here we present an overview of the discoveries so far published about the role of T-UCR in cancer and disease.
© 2017 Elsevier Inc. All rights reserved.

Entities:  

Keywords:  Cancer; Noncoding RNA; T-UCR; Transcribed ultraconserved region

Mesh:

Substances:

Year:  2017        PMID: 28729024     DOI: 10.1016/bs.ircmb.2017.04.004

Source DB:  PubMed          Journal:  Int Rev Cell Mol Biol        ISSN: 1937-6448            Impact factor:   6.813


  13 in total

1.  LncRNAs and Available Databases.

Authors:  Sara Napoli
Journal:  Methods Mol Biol       Date:  2021

2.  Genetic Variations of Ultraconserved Elements in the Human Genome.

Authors:  Anamarija Habic; John S Mattick; George Adrian Calin; Rok Krese; Janez Konc; Tanja Kunej
Journal:  OMICS       Date:  2019-11

Review 3.  Role of transcribed ultraconserved regions in gastric cancer and therapeutic perspectives.

Authors:  Shen-Shuo Gao; Zhi-Kai Zhang; Xu-Bin Wang; Yan Ma; Guo-Qing Yin; Xiao-Bo Guo
Journal:  World J Gastroenterol       Date:  2022-07-07       Impact factor: 5.374

Review 4.  Perfect and imperfect views of ultraconserved sequences.

Authors:  Valentina Snetkova; Len A Pennacchio; Axel Visel; Diane E Dickel
Journal:  Nat Rev Genet       Date:  2021-11-11       Impact factor: 59.581

5.  Ultraconserved Elements Occupy Specific Arenas of Three-Dimensional Mammalian Genome Organization.

Authors:  Ruth B McCole; Jelena Erceg; Wren Saylor; Chao-Ting Wu
Journal:  Cell Rep       Date:  2018-07-10       Impact factor: 9.423

6.  A novel lncRNA derived from an ultraconserved region: lnc-uc.147, a potential biomarker in luminal A breast cancer.

Authors:  Erika Pereira Zambalde; Recep Bayraktar; Tayana Schultz Jucoski; Cristina Ivan; Ana Carolina Rodrigues; Carolina Mathias; Erik Knutsen; Rubens Silveira de Lima; Daniela Fiori Gradia; Enilze Maria de Souza Fonseca Ribeiro; Samir Hannash; George Adrian Calin; Jaqueline Carvalhode Oliveira
Journal:  RNA Biol       Date:  2021-08-13       Impact factor: 4.766

Review 7.  The Unforeseen Non-Coding RNAs in Head and Neck Cancer.

Authors:  Alexandra Iulia Irimie; Alina-Andreea Zimta; Cristina Ciocan; Nikolay Mehterov; Diana Dudea; Cornelia Braicu; Ioana Berindan-Neagoe
Journal:  Genes (Basel)       Date:  2018-03-01       Impact factor: 4.096

8.  SNPs in lncRNA Regions and Breast Cancer Risk.

Authors:  Maija Suvanto; Jonathan Beesley; Carl Blomqvist; Georgia Chenevix-Trench; Sofia Khan; Heli Nevanlinna
Journal:  Front Genet       Date:  2020-06-30       Impact factor: 4.599

9.  Analysis of the circRNA and T-UCR populations identifies convergent pathways in mouse and human models of Rett syndrome.

Authors:  Edilene Siqueira; Aida Obiols-Guardia; Olga C Jorge-Torres; Cristina Oliveira-Mateos; Marta Soler; Deepthi Ramesh-Kumar; Fernando Setién; Daniëlle van Rossum; Ainhoa Pascual-Alonso; Clara Xiol; Cristina Ivan; Masayoshi Shimizu; Judith Armstrong; George A Calin; R Jeroen Pasterkamp; Manel Esteller; Sonia Guil
Journal:  Mol Ther Nucleic Acids       Date:  2021-12-22       Impact factor: 8.886

10.  Uc.416 + A promotes epithelial-to-mesenchymal transition through miR-153 in renal cell carcinoma.

Authors:  Yohei Sekino; Naoya Sakamoto; Keisuke Goto; Ririno Honma; Yoshinori Shigematsu; Thang Pham Quoc; Kazuhiro Sentani; Naohide Oue; Jun Teishima; Fumi Kawakami; Jose A Karam; Kanishka Sircar; Akio Matsubara; Wataru Yasui
Journal:  BMC Cancer       Date:  2018-10-04       Impact factor: 4.430

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