Literature DB >> 28723573

Proteomic and Metabolomic Characterization of a Mammalian Cellular Transition from Quiescence to Proliferation.

Ho-Joon Lee1, Mark P Jedrychowski2, Arunachalam Vinayagam3, Ning Wu4, Ng Shyh-Chang5, Yanhui Hu3, Chua Min-Wen5, Jodene K Moore1, John M Asara6, Costas A Lyssiotis7, Norbert Perrimon3, Steven P Gygi2, Lewis C Cantley8, Marc W Kirschner9.   

Abstract

There exist similarities and differences in metabolism and physiology between normal proliferative cells and tumor cells. Once a cell enters the cell cycle, metabolic machinery is engaged to facilitate various processes. The kinetics and regulation of these metabolic changes have not been properly evaluated. To correlate the orchestration of these processes with the cell cycle, we analyzed the transition from quiescence to proliferation of a non-malignant murine pro-B lymphocyte cell line in response to IL-3. Using multiplex mass-spectrometry-based proteomics, we show that the transition to proliferation shares features generally attributed to cancer cells: upregulation of glycolysis, lipid metabolism, amino-acid synthesis, and nucleotide synthesis and downregulation of oxidative phosphorylation and the urea cycle. Furthermore, metabolomic profiling of this transition reveals similarities to cancer-related metabolic pathways. In particular, we find that methionine is consumed at a higher rate than that of other essential amino acids, with a potential link to maintenance of the epigenome.
Copyright © 2017 The Author(s). Published by Elsevier Inc. All rights reserved.

Entities:  

Keywords:  B cells; IL-3; TMT proteomics; cancer metabolism; cell cycle; cell growth; metabolomics; methionine; protein complexes; quiescence

Mesh:

Year:  2017        PMID: 28723573      PMCID: PMC5626450          DOI: 10.1016/j.celrep.2017.06.074

Source DB:  PubMed          Journal:  Cell Rep            Impact factor:   9.423


  68 in total

Review 1.  Living with or without cyclins and cyclin-dependent kinases.

Authors:  Charles J Sherr; James M Roberts
Journal:  Genes Dev       Date:  2004-11-15       Impact factor: 11.361

2.  Deregulated Bcl-2 gene expression selectively prolongs survival of growth factor-deprived hemopoietic cell lines.

Authors:  G Nuñez; L London; D Hockenbery; M Alexander; J P McKearn; S J Korsmeyer
Journal:  J Immunol       Date:  1990-05-01       Impact factor: 5.422

Review 3.  Control of mammalian cell proliferation.

Authors:  A Zetterberg
Journal:  Curr Opin Cell Biol       Date:  1990-04       Impact factor: 8.382

4.  A novel gene product that couples TCR signaling to Fas(CD95) expression in activation-induced cell death.

Authors:  C G Park; S Y Lee; G Kandala; S Y Lee; Y Choi
Journal:  Immunity       Date:  1996-06       Impact factor: 31.745

Review 5.  How cancer metabolism is tuned for proliferation and vulnerable to disruption.

Authors:  Almut Schulze; Adrian L Harris
Journal:  Nature       Date:  2012-11-15       Impact factor: 49.962

6.  Cytokine stimulation of aerobic glycolysis in hematopoietic cells exceeds proliferative demand.

Authors:  Daniel E Bauer; Marian H Harris; David R Plas; Julian J Lum; Peter S Hammerman; Jeffrey C Rathmell; James L Riley; Craig B Thompson
Journal:  FASEB J       Date:  2004-06-04       Impact factor: 5.191

Review 7.  Regulation of PDH activity and isoform expression: diet and exercise.

Authors:  S J Peters
Journal:  Biochem Soc Trans       Date:  2003-12       Impact factor: 5.407

Review 8.  Arginine pathways and the inflammatory response: interregulation of nitric oxide and polyamines: review article.

Authors:  J Satriano
Journal:  Amino Acids       Date:  2004-04-08       Impact factor: 3.520

9.  S-adenosylmethionine levels regulate the schwann cell DNA methylome.

Authors:  Marta Varela-Rey; Marta Iruarrizaga-Lejarreta; Juan José Lozano; Ana María Aransay; Agustín F Fernandez; José Luis Lavin; David Mósen-Ansorena; María Berdasco; Marc Turmaine; Zigmund Luka; Conrad Wagner; Shelly C Lu; Manel Esteller; Rhona Mirsky; Kristján R Jessen; Mario F Fraga; María L Martínez-Chantar; José M Mato; Ashwin Woodhoo
Journal:  Neuron       Date:  2014-03-05       Impact factor: 17.173

Review 10.  Cancer metabolism: current perspectives and future directions.

Authors:  C Muñoz-Pinedo; N El Mjiyad; J-E Ricci
Journal:  Cell Death Dis       Date:  2012-01-12       Impact factor: 8.469

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  12 in total

Review 1.  Stem Cell Quiescence: Dynamism, Restraint, and Cellular Idling.

Authors:  Cindy T J van Velthoven; Thomas A Rando
Journal:  Cell Stem Cell       Date:  2019-02-07       Impact factor: 24.633

2.  Hotspot SF3B1 mutations induce metabolic reprogramming and vulnerability to serine deprivation.

Authors:  W Brian Dalton; Eric Helmenstine; Noel Walsh; Lukasz P Gondek; Dhanashree S Kelkar; Abigail Read; Rachael Natrajan; Eric S Christenson; Barbara Roman; Samarjit Das; Liang Zhao; Robert D Leone; Daniel Shinn; Taylor Groginski; Anil K Madugundu; Arun Patil; Daniel J Zabransky; Arielle Medford; Justin Lee; Alex J Cole; Marc Rosen; Maya Thakar; Alexander Ambinder; Joshua Donaldson; Amy E DeZern; Karen Cravero; David Chu; Rafael Madero-Marroquin; Akhilesh Pandey; Paula J Hurley; Josh Lauring; Ben Ho Park
Journal:  J Clin Invest       Date:  2019-08-08       Impact factor: 14.808

Review 3.  Putting the brakes on the cell cycle: mechanisms of cellular growth arrest.

Authors:  Lindsey R Pack; Leighton H Daigh; Tobias Meyer
Journal:  Curr Opin Cell Biol       Date:  2019-06-25       Impact factor: 8.382

4.  Sirtuin 5 Is Regulated by the SCFCyclin F Ubiquitin Ligase and Is Involved in Cell Cycle Control.

Authors:  Christine A Mills; Xianxi Wang; Dhaval P Bhatt; Paul A Grimsrud; Jacob Peter Matson; Debojyoti Lahiri; Daniel J Burke; Jeanette Gowen Cook; Matthew D Hirschey; Michael J Emanuele
Journal:  Mol Cell Biol       Date:  2021-01-25       Impact factor: 4.272

5.  Dynamic 13C Flux Analysis Captures the Reorganization of Adipocyte Glucose Metabolism in Response to Insulin.

Authors:  Lake-Ee Quek; James R Krycer; Satoshi Ohno; Katsuyuki Yugi; Daniel J Fazakerley; Richard Scalzo; Sarah D Elkington; Ziwei Dai; Akiyoshi Hirayama; Satsuki Ikeda; Futaba Shoji; Kumi Suzuki; Jason W Locasale; Tomoyoshi Soga; David E James; Shinya Kuroda
Journal:  iScience       Date:  2020-01-21

6.  Metabolic Response of Pleurotus ostreatus to Continuous Heat Stress.

Authors:  Zhiyu Yan; Mengran Zhao; Xiangli Wu; Jinxia Zhang
Journal:  Front Microbiol       Date:  2020-01-21       Impact factor: 5.640

7.  Multi-platform NMR Study of Pluripotent Stem Cells Unveils Complementary Metabolic Signatures towards Differentiation.

Authors:  Bénédicte Elena-Herrmann; Emilie Montellier; Anne Fages; Reut Bruck-Haimson; Arieh Moussaieff
Journal:  Sci Rep       Date:  2020-01-31       Impact factor: 4.379

8.  Metabolomic and Transcriptomic Analysis of MCF-7 Cells Exposed to 23 Chemicals at Human-Relevant Levels: Estimation of Individual Chemical Contribution to Effects.

Authors:  Min Liu; Shenglan Jia; Ting Dong; Fanrong Zhao; Tengfei Xu; Qin Yang; Jicheng Gong; Mingliang Fang
Journal:  Environ Health Perspect       Date:  2020-12-16       Impact factor: 9.031

9.  Trehalose alleviates high-temperature stress in Pleurotus ostreatus by affecting central carbon metabolism.

Authors:  Zhi-Yu Yan; Meng-Ran Zhao; Chen-Yang Huang; Li-Jiao Zhang; Jin-Xia Zhang
Journal:  Microb Cell Fact       Date:  2021-04-07       Impact factor: 5.328

10.  Metabolic signatures of regulation by phosphorylation and acetylation.

Authors:  Kirk Smith; Fangzhou Shen; Ho Joon Lee; Sriram Chandrasekaran
Journal:  iScience       Date:  2022-01-01
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