Literature DB >> 28717023

The evolution of diatoms and their biogeochemical functions.

Anne-Sophie Benoiston1, Federico M Ibarbalz2, Lucie Bittner1, Lionel Guidi3,4, Oliver Jahn5, Stephanie Dutkiewicz5, Chris Bowler6.   

Abstract

In contemporary oceans diatoms are an important group of eukaryotic phytoplankton that typically dominate in upwelling regions and at high latitudes. They also make significant contributions to sporadic blooms that often occur in springtime. Recent surveys have revealed global information about their abundance and diversity, as well as their contributions to biogeochemical cycles, both as primary producers of organic material and as conduits facilitating the export of carbon and silicon to the ocean interior. Sequencing of diatom genomes is revealing the evolutionary underpinnings of their ecological success by examination of their gene repertoires and the mechanisms they use to adapt to environmental changes. The rise of the diatoms over the last hundred million years is similarly being explored through analysis of microfossils and biomarkers that can be traced through geological time, as well as their contributions to seafloor sediments and fossil fuel reserves. The current review aims to synthesize current information about the evolution and biogeochemical functions of diatoms as they rose to prominence in the global ocean.This article is part of the themed issue 'The peculiar carbon metabolism in diatoms'.
© 2017 The Author(s).

Entities:  

Keywords:  biogeochemistry; carbon export; diatom; genomics; geological record; photosynthesis

Mesh:

Substances:

Year:  2017        PMID: 28717023      PMCID: PMC5516106          DOI: 10.1098/rstb.2016.0397

Source DB:  PubMed          Journal:  Philos Trans R Soc Lond B Biol Sci        ISSN: 0962-8436            Impact factor:   6.237


  56 in total

Review 1.  Early animal evolution: emerging views from comparative biology and geology.

Authors:  A H Knoll; S B Carroll
Journal:  Science       Date:  1999-06-25       Impact factor: 47.728

2.  Devonian rise in atmospheric oxygen correlated to the radiations of terrestrial plants and large predatory fish.

Authors:  Tais W Dahl; Emma U Hammarlund; Ariel D Anbar; David P G Bond; Benjamin C Gill; Gwyneth W Gordon; Andrew H Knoll; Arne T Nielsen; Niels H Schovsbo; Donald E Canfield
Journal:  Proc Natl Acad Sci U S A       Date:  2010-09-30       Impact factor: 11.205

Review 3.  The origin and establishment of the plastid in algae and plants.

Authors:  Adrian Reyes-Prieto; Andreas P M Weber; Debashish Bhattacharya
Journal:  Annu Rev Genet       Date:  2007       Impact factor: 16.830

4.  The Paleoproterozoic snowball Earth: a climate disaster triggered by the evolution of oxygenic photosynthesis.

Authors:  Robert E Kopp; Joseph L Kirschvink; Isaac A Hilburn; Cody Z Nash
Journal:  Proc Natl Acad Sci U S A       Date:  2005-08-01       Impact factor: 11.205

5.  Genomic footprints of a cryptic plastid endosymbiosis in diatoms.

Authors:  Ahmed Moustafa; Bánk Beszteri; Uwe G Maier; Chris Bowler; Klaus Valentin; Debashish Bhattacharya
Journal:  Science       Date:  2009-06-26       Impact factor: 47.728

Review 6.  The microbial engines that drive Earth's biogeochemical cycles.

Authors:  Paul G Falkowski; Tom Fenchel; Edward F Delong
Journal:  Science       Date:  2008-05-23       Impact factor: 47.728

Review 7.  Probing the evolution, ecology and physiology of marine protists using transcriptomics.

Authors:  David A Caron; Harriet Alexander; Andrew E Allen; John M Archibald; E Virginia Armbrust; Charles Bachy; Callum J Bell; Arvind Bharti; Sonya T Dyhrman; Stephanie M Guida; Karla B Heidelberg; Jonathan Z Kaye; Julia Metzner; Sarah R Smith; Alexandra Z Worden
Journal:  Nat Rev Microbiol       Date:  2016-11-21       Impact factor: 60.633

8.  Diversity dynamics of marine planktonic diatoms across the Cenozoic.

Authors:  Daniel L Rabosky; Ulf Sorhannus
Journal:  Nature       Date:  2009-01-08       Impact factor: 49.962

9.  Cryoconite pans on Snowball Earth: supraglacial oases for Cryogenian eukaryotes?

Authors:  P F Hoffman
Journal:  Geobiology       Date:  2016-07-15       Impact factor: 4.407

10.  An integrative analysis of post-translational histone modifications in the marine diatom Phaeodactylum tricornutum.

Authors:  Alaguraj Veluchamy; Achal Rastogi; Xin Lin; Bérangère Lombard; Omer Murik; Yann Thomas; Florent Dingli; Maximo Rivarola; Sandra Ott; Xinyue Liu; Yezhou Sun; Pablo D Rabinowicz; James McCarthy; Andrew E Allen; Damarys Loew; Chris Bowler; Leïla Tirichine
Journal:  Genome Biol       Date:  2015-05-20       Impact factor: 13.583

View more
  23 in total

1.  Non-Enzymatic Synthesis of Bioactive Isoprostanoids in the Diatom Phaeodactylum following Oxidative Stress.

Authors:  Josselin Lupette; Antoine Jaussaud; Claire Vigor; Camille Oger; Jean-Marie Galano; Guillaume Réversat; Joseph Vercauteren; Juliette Jouhet; Thierry Durand; Eric Maréchal
Journal:  Plant Physiol       Date:  2018-09-20       Impact factor: 8.340

2.  Proximity proteomics in a marine diatom reveals a putative cell surface-to-chloroplast iron trafficking pathway.

Authors:  Jernej Turnšek; John K Brunson; Maria Del Pilar Martinez Viedma; Thomas J Deerinck; Aleš Horák; Miroslav Oborník; Vincent A Bielinski; Andrew Ellis Allen
Journal:  Elife       Date:  2021-02-16       Impact factor: 8.140

3.  Pheromone Mediated Sexual Reproduction of Pennate Diatom Cylindrotheca closterium.

Authors:  Franziska Klapper; Sien Audoor; Wim Vyverman; Georg Pohnert
Journal:  J Chem Ecol       Date:  2021-04-29       Impact factor: 2.626

4.  ppGpp influences protein protection, growth and photosynthesis in Phaeodactylum tricornutum.

Authors:  Luisana Avilan; Regine Lebrun; Carine Puppo; Sylvie Citerne; Stephane Cuiné; Yonghua Li-Beisson; Benoît Menand; Ben Field; Brigitte Gontero
Journal:  New Phytol       Date:  2021-03-19       Impact factor: 10.151

5.  Collective sinking promotes selective cell pairing in planktonic pennate diatoms.

Authors:  Joan S Font-Muñoz; Raphaël Jeanneret; Jorge Arrieta; Sílvia Anglès; Antoni Jordi; Idan Tuval; Gotzon Basterretxea
Journal:  Proc Natl Acad Sci U S A       Date:  2019-07-25       Impact factor: 11.205

6.  Early dynamics of photosynthetic Lhcf2 and Lhcf15 transcription and mRNA stabilities in response to herbivory-related decadienal in Phaeodactylum tricornutum.

Authors:  Shahima Islam; Tanya Sabharwal; Samantha Wu; T J Bullock; Mona C Mehdy
Journal:  Sci Rep       Date:  2020-02-06       Impact factor: 4.379

7.  Storage Compound Accumulation in Diatoms as Response to Elevated CO2 Concentration.

Authors:  Erik L Jensen; Karen Yangüez; Frédéric Carrière; Brigitte Gontero
Journal:  Biology (Basel)       Date:  2019-12-24

Review 8.  Impact of organic carbon acquisition on growth and functional biomolecule production in diatoms.

Authors:  Thomas Kiran Marella; Raya Bhattacharjya; Archana Tiwari
Journal:  Microb Cell Fact       Date:  2021-07-15       Impact factor: 5.328

9.  Is the diatom sex clock a clock?

Authors:  Thomas Fuhrmann-Lieker; Nico Kubetschek; Jonas Ziebarth; Roland Klassen; Werner Seiler
Journal:  J R Soc Interface       Date:  2021-06-16       Impact factor: 4.118

10.  Global identification of a marine diatom long noncoding natural antisense transcripts (NATs) and their response to phosphate fluctuations.

Authors:  Maria Helena Cruz de Carvalho; Chris Bowler
Journal:  Sci Rep       Date:  2020-08-24       Impact factor: 4.379

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.