Literature DB >> 28716922

Local destabilization, rigid body, and fuzzy docking facilitate the phosphorylation of the transcription factor Ets-1 by the mitogen-activated protein kinase ERK2.

Andrea Piserchio1, Mangalika Warthaka2, Tamer S Kaoud2,3, Kari Callaway2, Kevin N Dalby4,5, Ranajeet Ghose6,7,8,9.   

Abstract

Mitogen-activated protein (MAP) kinase substrates are believed to require consensus docking motifs (D-site, F-site) to engage and facilitate efficient site-specific phosphorylation at specific serine/threonine-proline sequences by their cognate kinases. In contrast to other MAP kinase substrates, the transcription factor Ets-1 has no canonical docking motifs, yet it is efficiently phosphorylated by the MAP kinase ERK2 at a consensus threonine site (T38). Using NMR methodology, we demonstrate that this phosphorylation is enabled by a unique bipartite mode of ERK2 engagement by Ets-1 and involves two suboptimal noncanonical docking interactions instead of a single canonical docking motif. The N terminus of Ets-1 interacts with a part of the ERK2 D-recruitment site that normally accommodates the hydrophobic sidechains of a canonical D-site, retaining a significant degree of disorder in its ERK2-bound state. In contrast, the C-terminal region of Ets-1, including its Pointed (PNT) domain, engages in a largely rigid body interaction with a section of the ERK2 F-recruitment site through a binding mode that deviates significantly from that of a canonical F-site. This latter interaction is notable for the destabilization of a flexible helix that bridges the phospho-acceptor site to the rigid PNT domain. These two spatially distinct, individually weak docking interactions facilitate the highly specific recognition of ERK2 by Ets-1, and enable the optimal localization of its dynamic phospho-acceptor T38 at the kinase active site to enable efficient phosphorylation.

Entities:  

Keywords:  MAP kinase; proximity-mediated catalysis; solution NMR; transcription factor

Mesh:

Substances:

Year:  2017        PMID: 28716922      PMCID: PMC5547609          DOI: 10.1073/pnas.1702973114

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  49 in total

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Journal:  J Magn Reson       Date:  2001-04       Impact factor: 2.229

2.  Ras signaling requires dynamic properties of Ets1 for phosphorylation-enhanced binding to coactivator CBP.

Authors:  Mary L Nelson; Hyun-Seo Kang; Gregory M Lee; Adam G Blaszczak; Desmond K W Lau; Lawrence P McIntosh; Barbara J Graves
Journal:  Proc Natl Acad Sci U S A       Date:  2010-05-13       Impact factor: 11.205

Review 3.  The extracellular signal-regulated kinase: multiple substrates regulate diverse cellular functions.

Authors:  Seunghee Yoon; Rony Seger
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4.  Structural basis for signal-sequence recognition by the translocase motor SecA as determined by NMR.

Authors:  Ioannis Gelis; Alexandre M J J Bonvin; Dimitra Keramisanou; Marina Koukaki; Giorgos Gouridis; Spyridoula Karamanou; Anastassios Economou; Charalampos G Kalodimos
Journal:  Cell       Date:  2007-11-16       Impact factor: 41.582

5.  Multiple docking sites on substrate proteins form a modular system that mediates recognition by ERK MAP kinase.

Authors:  D Jacobs; D Glossip; H Xing; A J Muslin; K Kornfeld
Journal:  Genes Dev       Date:  1999-01-15       Impact factor: 11.361

6.  Solution NMR insights into docking interactions involving inactive ERK2.

Authors:  Andrea Piserchio; Mangalika Warthaka; Ashwini K Devkota; Tamer S Kaoud; Sunbae Lee; Olga Abramczyk; Pengyu Ren; Kevin N Dalby; Ranajeet Ghose
Journal:  Biochemistry       Date:  2011-04-19       Impact factor: 3.162

7.  Ras/mitogen-activated protein kinase signaling activates Ets-1 and Ets-2 by CBP/p300 recruitment.

Authors:  Charles E Foulds; Mary L Nelson; Adam G Blaszczak; Barbara J Graves
Journal:  Mol Cell Biol       Date:  2004-12       Impact factor: 4.272

8.  Spectral density function mapping using 15N relaxation data exclusively.

Authors:  N A Farrow; O Zhang; A Szabo; D A Torchia; L E Kay
Journal:  J Biomol NMR       Date:  1995-09       Impact factor: 2.835

9.  The anti-apoptotic protein PEA-15 is a tight binding inhibitor of ERK1 and ERK2, which blocks docking interactions at the D-recruitment site.

Authors:  Kari Callaway; Olga Abramczyk; Lance Martin; Kevin N Dalby
Journal:  Biochemistry       Date:  2007-07-21       Impact factor: 3.162

10.  A unified conformational selection and induced fit approach to protein-peptide docking.

Authors:  Mikael Trellet; Adrien S J Melquiond; Alexandre M J J Bonvin
Journal:  PLoS One       Date:  2013-03-13       Impact factor: 3.240

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Journal:  Bioorg Chem       Date:  2018-10-23       Impact factor: 5.275

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3.  Specificity of Phosphorylation Responses to Mitogen Activated Protein (MAP) Kinase Pathway Inhibitors in Melanoma Cells.

Authors:  Joel Basken; Scott A Stuart; Andrew J Kavran; Thomas Lee; Christopher C Ebmeier; William M Old; Natalie G Ahn
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Review 5.  ERK signalling: a master regulator of cell behaviour, life and fate.

Authors:  Hugo Lavoie; Jessica Gagnon; Marc Therrien
Journal:  Nat Rev Mol Cell Biol       Date:  2020-06-23       Impact factor: 94.444

6.  A Novel Class of Common Docking Domain Inhibitors That Prevent ERK2 Activation and Substrate Phosphorylation.

Authors:  Rachel M Sammons; Nicole A Perry; Yangmei Li; Eun Jeong Cho; Andrea Piserchio; Diana P Zamora-Olivares; Ranajeet Ghose; Tamer S Kaoud; Ginamarie Debevec; Chandra Bartholomeusz; Vsevolod V Gurevich; Tina M Iverson; Marc Giulianotti; Richard A Houghten; Kevin N Dalby
Journal:  ACS Chem Biol       Date:  2019-05-13       Impact factor: 5.100

Review 7.  The E-Twenty-Six Family in Hepatocellular Carcinoma: Moving into the Spotlight.

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8.  Activation Loop Dynamics Are Coupled to Core Motions in Extracellular Signal-Regulated Kinase-2.

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9.  Conformational states dynamically populated by a kinase determine its function.

Authors:  Tao Xie; Tamjeed Saleh; Paolo Rossi; Charalampos G Kalodimos
Journal:  Science       Date:  2020-10-01       Impact factor: 47.728

10.  Modulating multi-functional ERK complexes by covalent targeting of a recruitment site in vivo.

Authors:  Tamer S Kaoud; William H Johnson; Nancy D Ebelt; Andrea Piserchio; Diana Zamora-Olivares; Sabrina X Van Ravenstein; Jacey R Pridgen; Ramakrishna Edupuganti; Rachel Sammons; Micael Cano; Mangalika Warthaka; Matthew Harger; Clint D J Tavares; Jihyun Park; Mohamed F Radwan; Pengyu Ren; Eric V Anslyn; Kenneth Y Tsai; Ranajeet Ghose; Kevin N Dalby
Journal:  Nat Commun       Date:  2019-11-19       Impact factor: 14.919

  10 in total

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