Literature DB >> 28716713

N-myc regulates growth and fiber cell differentiation in lens development.

Gabriel R Cavalheiro1, Gabriel E Matos-Rodrigues1, Yilin Zhao2, Anielle L Gomes1, Deepti Anand3, Danilo Predes1, Silmara de Lima1, Jose G Abreu1, Deyou Zheng4, Salil A Lachke5, Ales Cvekl6, Rodrigo A P Martins7.   

Abstract

Myc proto-oncogenes regulate diverse cellular processes during development, but their roles during morphogenesis of specific tissues are not fully understood. We found that c-myc regulates cell proliferation in mouse lens development and previous genome-wide studies suggested functional roles for N-myc in developing lens. Here, we examined the role of N-myc in mouse lens development. Genetic inactivation of N-myc in the surface ectoderm or lens vesicle impaired eye and lens growth, while "late" inactivation in lens fibers had no effect. Unexpectedly, defective growth of N-myc-deficient lenses was not associated with alterations in lens progenitor cell proliferation or survival. Notably, N-myc-deficient lens exhibited a delay in degradation of DNA in terminally differentiating lens fiber cells. RNA-sequencing analysis of N-myc-deficient lenses identified a cohort of down-regulated genes associated with fiber cell differentiation that included DNaseIIβ. Further, an integrated analysis of differentially expressed genes in N-myc-deficient lens using normal lens expression patterns of iSyTE, N-myc-binding motif analysis and molecular interaction data from the String database led to the derivation of an N-myc-based gene regulatory network in the lens. Finally, analysis of N-myc and c-myc double-deficient lens demonstrated that these Myc genes cooperate to drive lens growth prior to lens vesicle stage. Together, these findings provide evidence for exclusive and cooperative functions of Myc transcription factors in mouse lens development and identify novel mechanisms by which N-myc regulates cell differentiation during eye morphogenesis.
Copyright © 2017 Elsevier Inc. All rights reserved.

Entities:  

Keywords:  Cell cycle; Denucleation; Eye; Oncogene; Organogenesis; Transcription factor

Mesh:

Substances:

Year:  2017        PMID: 28716713      PMCID: PMC5586101          DOI: 10.1016/j.ydbio.2017.07.002

Source DB:  PubMed          Journal:  Dev Biol        ISSN: 0012-1606            Impact factor:   3.582


  68 in total

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Journal:  Dev Biol       Date:  2000-04-15       Impact factor: 3.582

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3.  Chromatin remodeling enzyme Snf2h regulates embryonic lens differentiation and denucleation.

Authors:  Shuying He; Saima Limi; Rebecca S McGreal; Qing Xie; Lisa A Brennan; Wanda Lee Kantorow; Juraj Kokavec; Romit Majumdar; Harry Hou; Winfried Edelmann; Wei Liu; Ruth Ashery-Padan; Jiri Zavadil; Marc Kantorow; Arthur I Skoultchi; Tomas Stopka; Ales Cvekl
Journal:  Development       Date:  2016-06-01       Impact factor: 6.868

4.  Analysis of C-MYC function in normal cells via conditional gene-targeted mutation.

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Journal:  Immunity       Date:  2001-01       Impact factor: 31.745

5.  Mutations in the RNA granule component TDRD7 cause cataract and glaucoma.

Authors:  Salil A Lachke; Fowzan S Alkuraya; Stephen C Kneeland; Takbum Ohn; Anton Aboukhalil; Gareth R Howell; Irfan Saadi; Resy Cavallesco; Yingzi Yue; Anne C-H Tsai; K Saidas Nair; Mihai I Cosma; Richard S Smith; Emily Hodges; Suad M Alfadhli; Amal Al-Hajeri; Hanan E Shamseldin; Abdulmutalib Behbehani; Gregory J Hannon; Martha L Bulyk; Arlene V Drack; Paul J Anderson; Simon W M John; Richard L Maas
Journal:  Science       Date:  2011-03-25       Impact factor: 47.728

6.  Myocardial Mycn is essential for mouse ventricular wall morphogenesis.

Authors:  Cristina Harmelink; Yin Peng; Paige DeBenedittis; Hanying Chen; Weinian Shou; Kai Jiao
Journal:  Dev Biol       Date:  2012-10-12       Impact factor: 3.582

Review 7.  On the mechanism of organelle degradation in the vertebrate lens.

Authors:  Steven Bassnett
Journal:  Exp Eye Res       Date:  2008-09-18       Impact factor: 3.467

8.  c-Myc regulates cell proliferation during lens development.

Authors:  Gabriel R Cavalheiro; Gabriel E Matos-Rodrigues; Anielle L Gomes; Paulo M G Rodrigues; Rodrigo A P Martins
Journal:  PLoS One       Date:  2014-02-04       Impact factor: 3.240

9.  HTSeq--a Python framework to work with high-throughput sequencing data.

Authors:  Simon Anders; Paul Theodor Pyl; Wolfgang Huber
Journal:  Bioinformatics       Date:  2014-09-25       Impact factor: 6.937

10.  Histone posttranslational modifications and cell fate determination: lens induction requires the lysine acetyltransferases CBP and p300.

Authors:  Louise Wolf; Wilbur Harrison; Jie Huang; Qing Xie; Ningna Xiao; Jian Sun; Lingkun Kong; Salil A Lachke; Murali R Kuracha; Venkatesh Govindarajan; Paul K Brindle; Ruth Ashery-Padan; David C Beebe; Paul A Overbeek; Ales Cvekl
Journal:  Nucleic Acids Res       Date:  2013-09-12       Impact factor: 16.971

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  16 in total

1.  RNA sequencing-based transcriptomic profiles of embryonic lens development for cataract gene discovery.

Authors:  Deepti Anand; Atul Kakrana; Archana D Siddam; Hongzhan Huang; Irfan Saadi; Salil A Lachke
Journal:  Hum Genet       Date:  2018-11-11       Impact factor: 4.132

Review 2.  RNA-binding proteins and post-transcriptional regulation in lens biology and cataract: Mediating spatiotemporal expression of key factors that control the cell cycle, transcription, cytoskeleton and transparency.

Authors:  Salil A Lachke
Journal:  Exp Eye Res       Date:  2021-12-11       Impact factor: 3.467

Review 3.  Signaling and Gene Regulatory Networks in Mammalian Lens Development.

Authors:  Ales Cvekl; Xin Zhang
Journal:  Trends Genet       Date:  2017-08-31       Impact factor: 11.639

4.  Proteome-transcriptome analysis and proteome remodeling in mouse lens epithelium and fibers.

Authors:  Yilin Zhao; Phillip A Wilmarth; Catherine Cheng; Saima Limi; Velia M Fowler; Deyou Zheng; Larry L David; Ales Cvekl
Journal:  Exp Eye Res       Date:  2018-10-22       Impact factor: 3.467

5.  MS/MS in silico subtraction-based proteomic profiling as an approach to facilitate disease gene discovery: application to lens development and cataract.

Authors:  Sandeep Aryal; Deepti Anand; Francisco G Hernandez; Bailey A T Weatherbee; Hongzhan Huang; Ashok P Reddy; Phillip A Wilmarth; Larry L David; Salil A Lachke
Journal:  Hum Genet       Date:  2019-12-03       Impact factor: 4.132

6.  A comprehensive spatial-temporal transcriptomic analysis of differentiating nascent mouse lens epithelial and fiber cells.

Authors:  Yilin Zhao; Deyou Zheng; Ales Cvekl
Journal:  Exp Eye Res       Date:  2018-06-05       Impact factor: 3.770

7.  Transcriptome analysis of developing lens reveals abundance of novel transcripts and extensive splicing alterations.

Authors:  Rajneesh Srivastava; Gungor Budak; Soma Dash; Salil A Lachke; Sarath Chandra Janga
Journal:  Sci Rep       Date:  2017-09-14       Impact factor: 4.379

8.  The RNA-binding protein Celf1 post-transcriptionally regulates p27Kip1 and Dnase2b to control fiber cell nuclear degradation in lens development.

Authors:  Archana D Siddam; Carole Gautier-Courteille; Linette Perez-Campos; Deepti Anand; Atul Kakrana; Christine A Dang; Vincent Legagneux; Agnès Méreau; Justine Viet; Jeffrey M Gross; Luc Paillard; Salil A Lachke
Journal:  PLoS Genet       Date:  2018-03-22       Impact factor: 5.917

9.  The Tudor-domain protein TDRD7, mutated in congenital cataract, controls the heat shock protein HSPB1 (HSP27) and lens fiber cell morphology.

Authors:  Carrie E Barnum; Salma Al Saai; Shaili D Patel; Catherine Cheng; Deepti Anand; Xiaolu Xu; Soma Dash; Archana D Siddam; Lisa Glazewski; Emily Paglione; Shawn W Polson; Shinichiro Chuma; Robert W Mason; Shuo Wei; Mona Batish; Velia M Fowler; Salil A Lachke
Journal:  Hum Mol Genet       Date:  2020-07-29       Impact factor: 6.150

10.  Profiling of chromatin accessibility and identification of general cis-regulatory mechanisms that control two ocular lens differentiation pathways.

Authors:  Yilin Zhao; Deyou Zheng; Ales Cvekl
Journal:  Epigenetics Chromatin       Date:  2019-05-03       Impact factor: 4.954

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