Literature DB >> 28714688

Design of a Chemical Probe for the Bromodomain and Plant Homeodomain Finger-Containing (BRPF) Family of Proteins.

Niall Igoe1, Elliott D Bayle1, Cynthia Tallant2, Oleg Fedorov2, Julia C Meier2, Pavel Savitsky2, Catherine Rogers2, Yannick Morias3, Sarah Scholze3, Helen Boyd3, Danen Cunoosamy3, David M Andrews4, Anne Cheasty5, Paul E Brennan2, Susanne Müller2,6, Stefan Knapp2,6,7, Paul V Fish1.   

Abstract

The bromodomain and plant homeodomain finger-containing (BRPF) family are scaffolding proteins important for the recruitment of histone acetyltransferases of the MYST family to chromatin. Here, we describe NI-57 (16) as new pan-BRPF chemical probe of the bromodomain (BRD) of the BRPFs. Inhibitor 16 preferentially bound the BRD of BRPF1 and BRPF2 over BRPF3, whereas binding to BRD9 was weaker. Compound 16 has excellent selectivity over nonclass IV BRD proteins. Target engagement of BRPF1B and BRPF2 with 16 was demonstrated in nanoBRET and FRAP assays. The binding of 16 to BRPF1B was rationalized through an X-ray cocrystal structure determination, which showed a flipped binding orientation when compared to previous structures. We report studies that show 16 has functional activity in cellular assays by modulation of the phenotype at low micromolar concentrations in both cancer and inflammatory models. Pharmacokinetic data for 16 was generated in mouse with single dose administration showing favorable oral bioavailability.

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Year:  2017        PMID: 28714688     DOI: 10.1021/acs.jmedchem.7b00611

Source DB:  PubMed          Journal:  J Med Chem        ISSN: 0022-2623            Impact factor:   7.446


  6 in total

Review 1.  Selective Targeting of Epigenetic Readers and Histone Deacetylases in Autoimmune and Inflammatory Diseases: Recent Advances and Future Perspectives.

Authors:  Mohammed Ghiboub; Ahmed M I Elfiky; Menno P J de Winther; Nicola R Harker; David F Tough; Wouter J de Jonge
Journal:  J Pers Med       Date:  2021-04-23

2.  Selective Targeting of Bromodomains of the Bromodomain-PHD Fingers Family Impairs Osteoclast Differentiation.

Authors:  Julia C Meier; Cynthia Tallant; Oleg Fedorov; Hanna Witwicka; Sung-Yong Hwang; Ruud G van Stiphout; Jean-Philippe Lambert; Catherine Rogers; Clarence Yapp; Brian S Gerstenberger; Vita Fedele; Pavel Savitsky; David Heidenreich; Danette L Daniels; Dafydd R Owen; Paul V Fish; Niall M Igoe; Elliott D Bayle; Bernard Haendler; Udo C T Oppermann; Francesca Buffa; Paul E Brennan; Susanne Müller; Anne Claude Gingras; Paul R Odgren; Mark J Birnbaum; Stefan Knapp
Journal:  ACS Chem Biol       Date:  2017-09-12       Impact factor: 5.100

3.  Isoform-specific involvement of Brpf1 in expansion of adult hematopoietic stem and progenitor cells.

Authors:  Qiuping He; Mengzhi Hong; Jincan He; Weixin Chen; Meng Zhao; Wei Zhao
Journal:  J Mol Cell Biol       Date:  2020-06-11       Impact factor: 6.216

Review 4.  BRPF1-KAT6A/KAT6B Complex: Molecular Structure, Biological Function and Human Disease.

Authors:  Gaoyu Zu; Ying Liu; Jingli Cao; Baicheng Zhao; Hang Zhang; Linya You
Journal:  Cancers (Basel)       Date:  2022-08-23       Impact factor: 6.575

5.  Evaluating the bromodomain protein BRD1 as a therapeutic target in rheumatoid arthritis.

Authors:  Kerstin Klein; Masaru Kato; Mojca Frank-Bertoncelj; Christoph Kolling; Adrian Ciurea; Steffen Gay; Caroline Ospelt
Journal:  Sci Rep       Date:  2018-07-24       Impact factor: 4.379

6.  The genetic alteration spectrum of the SWI/SNF complex: The oncogenic roles of BRD9 and ACTL6A.

Authors:  Xiaoxian Sima; Jiangnan He; Jie Peng; Yanmei Xu; Feng Zhang; Libin Deng
Journal:  PLoS One       Date:  2019-09-10       Impact factor: 3.240

  6 in total

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