| Literature DB >> 28713419 |
Ye Sun1,2, Carlos F Vargas-Mendoza3.
Abstract
Kleinia neriifolia Haw. is an endemic species on the Canarian archipelago, this species is widespread in the coastal thicket of all the Canarian islands. In the present study, genetic diversity and population structure of K. neriifolia were investigated using chloroplast gene sequences and nuclear SSR (simple sequence repeat). The differentiation among island populations, the historical demography, and the underlying evolutionary scenarios of this species are further tested based on the genetic data. Chloroplast diversity reveals a strong genetic divergence between eastern islands (Gran Canaria, Fuerteventura, and Lanzarote) and western islands (EI Hierro, La Palma, La Gomera, Tenerife), this west-east genetic divergence may reflect a very beginning of speciation. The evolutionary scenario with highest posterior probabilities suggests Gran Canaria as oldest population with a westward colonization path to Tenerife, La Gomera, La Palma, and EI Hierro, and eastward dispersal path to Lanzarote through Fuerteventura. In the western islands, there is a slight decrease in the effective population size toward areas of recent colonization. However, in the eastern islands, the effective population size increase in Lanzarote relative to Gran Canaria and Fuerteventura. These results further our understanding of the evolution of widespread endemic plants within Canarian archipelago.Entities:
Keywords: Canary Islands; Kleinia neriifolia; evolutionary scenario; population structure; simple sequence repeat
Year: 2017 PMID: 28713419 PMCID: PMC5492869 DOI: 10.3389/fpls.2017.01180
Source DB: PubMed Journal: Front Plant Sci ISSN: 1664-462X Impact factor: 5.753
Location, sample size, and gene diversity of the sampled populations of Kleinia neriifolia on the Canary Islands.
| Island | Location/code | Latitude | Longitude | Individuals (sequenced) | Haplotype | |||
|---|---|---|---|---|---|---|---|---|
| Lanzarote | Arrieta/L-Arr | 29°08′07 | 13°27′47 | 24 (4) | H7 (3), H8 (1) | 5.250 | 0.703 | 0.153 |
| Tias/L-Tia | 28°57′17 | 13°30′59 | 24 (4) | H7 (4) | 3.631 | 0.546 | 0.073 | |
| Tinajo/L-Tin | 29°03′58 | 13°40′43 | 22 (4) | H8 (4) | 4.109 | 0.600 | -0.093 | |
| Fuerteventura | Pajara/F-Paj | 28°20′59 | 14°06′42 | 24 (3) | H8 (3) | 5.726 | 0.704 | 0.383∗∗ |
| Vailebron/F-Vai | 28°34′55 | 13°55′51 | 15 (4) | H7 (2), H8 (1), H9 (1) | 3.827 | 0.603 | 0.204 | |
| Gran Canaria | Anden Verde/GC-Anv | 28°01′19 | 15°46′36 | 24 (4) | H6 (1), H7 (2), H8 (1) | 6.984 | 0.706 | 0.470∗∗ |
| Ingenio/GC-Ing | 27°56′53 | 15°25′24 | 24 (4) | H7 (1), H8 (1), H9 (2) | 7.090 | 0.719 | 0.205∗∗ | |
| Tenerife | Anaga/T-Ana | 28°33′28 | 16°18′41 | 23 (3) | H2 (3) | 6.491 | 0.736 | 0.139 |
| Arona/T-Aro | 28°06′00 | 16°40′00 | 24 (4) | H2 (2), H4 (2) | 5.425 | 0.696 | 0.205 | |
| La Gomera | Degollada/LG-Deg | 28°06′02 | 17°10′03 | 20 (4) | H1 (1), H3 (2), H5 (1) | 4.718 | 0.608 | 0.061 |
| Vallegranrey/LG-Val | 28°07′14 | 17°18′44 | 20 (4) | H1 (1), H3 (3) | 5.399 | 0.655 | 0.019 | |
| La Palma | de Belmaco/LP-Deb | 28°43′03 | 17°46′10 | 24 (4) | H2 (4) | 5.794 | 0.678 | 0.304∗∗ |
| San Antonia/LP-Saa | 28°29′40 | 17°51′20 | 24 (4) | H2 (4) | 5.412 | 0.686 | 0.410∗∗ | |
| EI Hierro | de la Pena/EH-Dlp | 27°48′23 | 17°54′12 | 24 (8) | H1 (8) | 6.191 | 0.679 | 0.290∗∗ |
Characteristics of the seven nuclear microsatellites used in this study.
| Locus | Null allele frequency | ||||||||
|---|---|---|---|---|---|---|---|---|---|
| S7-24 | 15 | 7.09 | 0.304 | 0.637 | 0.764 | 0.533∗∗ | 0.196 | 0.176 | 0.153 |
| S7-40 | 15 | 6.01 | 0.378 | 0.624 | 0.748 | 0.401∗∗ | 0.156 | 0.180 | 0.163 |
| S7-48 | 21 | 11.16 | 0.642 | 0.784 | 0.905 | 0.169∗∗ | 0.077 | 0.139 | 0.134 |
| S7-60 | 29 | 10.65 | 0.583 | 0.731 | 0.866 | 0.209∗∗ | 0.083 | 0.164 | 0.160 |
| S7-66 | 12 | 5.65 | 0.589 | 0.624 | 0.694 | 0.083∗ | 0.082 | 0.111 | 0.106 |
| S7-73 | 18 | 10.01 | 0.702 | 0.760 | 0.876 | 0.076∗∗ | 0.045 | 0.142 | 0.135 |
| S7-79 | 9 | 4.81 | 0.491 | 0.502 | 0.653 | 0.026 | 0.029 | 0.244 | 0.231 |
| Overall | 17 | 7.91 | 0.527 | 0.666 | 0.787 | 0.214∗∗ | 0.096 | 0.163 | 0.153 |