Literature DB >> 28709925

The infinitesimal model: Definition, derivation, and implications.

N H Barton1, A M Etheridge2, A Véber3.   

Abstract

Our focus here is on the infinitesimal model. In this model, one or several quantitative traits are described as the sum of a genetic and a non-genetic component, the first being distributed within families as a normal random variable centred at the average of the parental genetic components, and with a variance independent of the parental traits. Thus, the variance that segregates within families is not perturbed by selection, and can be predicted from the variance components. This does not necessarily imply that the trait distribution across the whole population should be Gaussian, and indeed selection or population structure may have a substantial effect on the overall trait distribution. One of our main aims is to identify some general conditions on the allelic effects for the infinitesimal model to be accurate. We first review the long history of the infinitesimal model in quantitative genetics. Then we formulate the model at the phenotypic level in terms of individual trait values and relationships between individuals, but including different evolutionary processes: genetic drift, recombination, selection, mutation, population structure, …. We give a range of examples of its application to evolutionary questions related to stabilising selection, assortative mating, effective population size and response to selection, habitat preference and speciation. We provide a mathematical justification of the model as the limit as the number M of underlying loci tends to infinity of a model with Mendelian inheritance, mutation and environmental noise, when the genetic component of the trait is purely additive. We also show how the model generalises to include epistatic effects. We prove in particular that, within each family, the genetic components of the individual trait values in the current generation are indeed normally distributed with a variance independent of ancestral traits, up to an error of order 1∕M. Simulations suggest that in some cases the convergence may be as fast as 1∕M.
Copyright © 2017 The Authors. Published by Elsevier Inc. All rights reserved.

Keywords:  Epistasis; Infinitesimal model; Quantitative genetics; Selection

Mesh:

Year:  2017        PMID: 28709925     DOI: 10.1016/j.tpb.2017.06.001

Source DB:  PubMed          Journal:  Theor Popul Biol        ISSN: 0040-5809            Impact factor:   1.570


  58 in total

1.  The Effects of Demography and Genetics on the Neutral Distribution of Quantitative Traits.

Authors:  Evan M Koch
Journal:  Genetics       Date:  2019-02-19       Impact factor: 4.562

Review 2.  Correlational selection in the age of genomics.

Authors:  Erik I Svensson; Stevan J Arnold; Reinhard Bürger; Katalin Csilléry; Jeremy Draghi; Jonathan M Henshaw; Adam G Jones; Stephen De Lisle; David A Marques; Katrina McGuigan; Monique N Simon; Anna Runemark
Journal:  Nat Ecol Evol       Date:  2021-04-15       Impact factor: 15.460

3.  Introgression of a Block of Genome Under Infinitesimal Selection.

Authors:  Himani Sachdeva; Nicholas H Barton
Journal:  Genetics       Date:  2018-06-12       Impact factor: 4.562

Review 4.  Evolutionary perspectives on polygenic selection, missing heritability, and GWAS.

Authors:  Lawrence H Uricchio
Journal:  Hum Genet       Date:  2019-06-14       Impact factor: 4.132

5.  Empirical measures of mutational effects define neutral models of regulatory evolution in Saccharomyces cerevisiae.

Authors:  Andrea Hodgins-Davis; Fabien Duveau; Elizabeth A Walker; Patricia J Wittkopp
Journal:  Proc Natl Acad Sci U S A       Date:  2019-09-30       Impact factor: 11.205

6.  Assortative mating on complex traits revisited: Double first cousins and the X-chromosome.

Authors:  Loic Yengo; Peter M Visscher
Journal:  Theor Popul Biol       Date:  2018-10-11       Impact factor: 1.570

7.  Quantitative genetics of body size evolution on islands: an individual-based simulation approach.

Authors:  José Alexandre F Diniz-Filho; Lucas Jardim; Thiago F Rangel; Phillip B Holden; Neil R Edwards; Joaquín Hortal; Ana M C Santos; Pasquale Raia
Journal:  Biol Lett       Date:  2019-10-09       Impact factor: 3.703

8.  Molecular Origins of Complex Heritability in Natural Genotype-to-Phenotype Relationships.

Authors:  Christopher M Jakobson; Daniel F Jarosz
Journal:  Cell Syst       Date:  2019-05-01       Impact factor: 10.304

9.  Trans Effects on Gene Expression Can Drive Omnigenic Inheritance.

Authors:  Xuanyao Liu; Yang I Li; Jonathan K Pritchard
Journal:  Cell       Date:  2019-05-02       Impact factor: 41.582

10.  Phylotranscriptomics of the Pentapetalae Reveals Frequent Regulatory Variation in Plant Local Responses to the Fungal Pathogen Sclerotinia sclerotiorum.

Authors:  Justine Sucher; Malick Mbengue; Axel Dresen; Marielle Barascud; Marie Didelon; Adelin Barbacci; Sylvain Raffaele
Journal:  Plant Cell       Date:  2020-04-07       Impact factor: 11.277

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.