Literature DB >> 28707973

Whole-Genome Sequencing in Common Respiratory Diseases. Ready, Set, Go!

Craig P Hersh1,2, Anil Vachani3.   

Abstract

Mesh:

Year:  2017        PMID: 28707973      PMCID: PMC5519974          DOI: 10.1164/rccm.201703-0479ED

Source DB:  PubMed          Journal:  Am J Respir Crit Care Med        ISSN: 1073-449X            Impact factor:   21.405


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  16 in total

1.  The Genome Analysis Toolkit: a MapReduce framework for analyzing next-generation DNA sequencing data.

Authors:  Aaron McKenna; Matthew Hanna; Eric Banks; Andrey Sivachenko; Kristian Cibulskis; Andrew Kernytsky; Kiran Garimella; David Altshuler; Stacey Gabriel; Mark Daly; Mark A DePristo
Journal:  Genome Res       Date:  2010-07-19       Impact factor: 9.043

2.  Extreme Trait Whole-Genome Sequencing Identifies PTPRO as a Novel Candidate Gene in Emphysema with Severe Airflow Obstruction.

Authors:  Josiah E Radder; Yingze Zhang; Alyssa D Gregory; Shibing Yu; Neil J Kelly; Joseph K Leader; Naftali Kaminski; Frank C Sciurba; Steven D Shapiro
Journal:  Am J Respir Crit Care Med       Date:  2017-07-15       Impact factor: 21.405

Review 3.  The Genetic Basis of Mendelian Phenotypes: Discoveries, Challenges, and Opportunities.

Authors:  Jessica X Chong; Kati J Buckingham; Shalini N Jhangiani; Corinne Boehm; Nara Sobreira; Joshua D Smith; Tanya M Harrell; Margaret J McMillin; Wojciech Wiszniewski; Tomasz Gambin; Zeynep H Coban Akdemir; Kimberly Doheny; Alan F Scott; Dimitri Avramopoulos; Aravinda Chakravarti; Julie Hoover-Fong; Debra Mathews; P Dane Witmer; Hua Ling; Kurt Hetrick; Lee Watkins; Karynne E Patterson; Frederic Reinier; Elizabeth Blue; Donna Muzny; Martin Kircher; Kaya Bilguvar; Francesc López-Giráldez; V Reid Sutton; Holly K Tabor; Suzanne M Leal; Murat Gunel; Shrikant Mane; Richard A Gibbs; Eric Boerwinkle; Ada Hamosh; Jay Shendure; James R Lupski; Richard P Lifton; David Valle; Deborah A Nickerson; Michael J Bamshad
Journal:  Am J Hum Genet       Date:  2015-07-09       Impact factor: 11.025

Review 4.  The role of regulatory variation in complex traits and disease.

Authors:  Frank W Albert; Leonid Kruglyak
Journal:  Nat Rev Genet       Date:  2015-02-24       Impact factor: 53.242

5.  Practical Approaches for Whole-Genome Sequence Analysis of Heart- and Blood-Related Traits.

Authors:  Alanna C Morrison; Zhuoyi Huang; Bing Yu; Ginger Metcalf; Xiaoming Liu; Christie Ballantyne; Josef Coresh; Fuli Yu; Donna Muzny; Elena Feofanova; Navin Rustagi; Richard Gibbs; Eric Boerwinkle
Journal:  Am J Hum Genet       Date:  2017-01-12       Impact factor: 11.025

6.  RNA Sequencing Analysis Detection of a Novel Pathway of Endothelial Dysfunction in Pulmonary Arterial Hypertension.

Authors:  Christopher J Rhodes; Hogune Im; Aiqin Cao; Jan K Hennigs; Lingli Wang; Silin Sa; Pin-I Chen; Nils P Nickel; Kazuya Miyagawa; Rachel K Hopper; Nancy F Tojais; Caiyun G Li; Mingxia Gu; Edda Spiekerkoetter; Zhaoying Xian; Rui Chen; Mingming Zhao; Mark Kaschwich; Patricia A Del Rosario; Daniel Bernstein; Roham T Zamanian; Joseph C Wu; Michael P Snyder; Marlene Rabinovitch
Journal:  Am J Respir Crit Care Med       Date:  2015-08-01       Impact factor: 21.405

Review 7.  Sequencing studies in human genetics: design and interpretation.

Authors:  David B Goldstein; Andrew Allen; Jonathan Keebler; Elliott H Margulies; Steven Petrou; Slavé Petrovski; Shamil Sunyaev
Journal:  Nat Rev Genet       Date:  2013-06-11       Impact factor: 53.242

8.  Exome sequencing links mutations in PARN and RTEL1 with familial pulmonary fibrosis and telomere shortening.

Authors:  Bridget D Stuart; Jungmin Choi; Samir Zaidi; Chao Xing; Brody Holohan; Rui Chen; Mihwa Choi; Pooja Dharwadkar; Fernando Torres; Carlos E Girod; Jonathan Weissler; John Fitzgerald; Corey Kershaw; Julia Klesney-Tait; Yolanda Mageto; Jerry W Shay; Weizhen Ji; Kaya Bilguvar; Shrikant Mane; Richard P Lifton; Christine Kim Garcia
Journal:  Nat Genet       Date:  2015-04-13       Impact factor: 41.307

9.  Whole exome re-sequencing implicates CCDC38 and cilia structure and function in resistance to smoking related airflow obstruction.

Authors:  Louise V Wain; Ian Sayers; María Soler Artigas; Michael A Portelli; Eleftheria Zeggini; Ma'en Obeidat; Don D Sin; Yohan Bossé; David Nickle; Corry-Anke Brandsma; Anders Malarstig; Ciara Vangjeli; Scott A Jelinsky; Sally John; Iain Kilty; Tricia McKeever; Nick R G Shrine; James P Cook; Shrina Patel; Tim D Spector; Edward J Hollox; Ian P Hall; Martin D Tobin
Journal:  PLoS Genet       Date:  2014-05-01       Impact factor: 5.917

10.  Variants with large effects on blood lipids and the role of cholesterol and triglycerides in coronary disease.

Authors:  Anna Helgadottir; Solveig Gretarsdottir; Gudmar Thorleifsson; Eirikur Hjartarson; Asgeir Sigurdsson; Audur Magnusdottir; Aslaug Jonasdottir; Helgi Kristjansson; Patrick Sulem; Asmundur Oddsson; Gardar Sveinbjornsson; Valgerdur Steinthorsdottir; Thorunn Rafnar; Gisli Masson; Ingileif Jonsdottir; Isleifur Olafsson; Gudmundur I Eyjolfsson; Olof Sigurdardottir; Maryam S Daneshpour; Davood Khalili; Fereidoun Azizi; Dorine W Swinkels; Lambertus Kiemeney; Arshed A Quyyumi; Allan I Levey; Riyaz S Patel; Salim S Hayek; Ingibjorg J Gudmundsdottir; Gudmundur Thorgeirsson; Unnur Thorsteinsdottir; Daniel F Gudbjartsson; Hilma Holm; Kari Stefansson
Journal:  Nat Genet       Date:  2016-05-02       Impact factor: 41.307

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  2 in total

Review 1.  Pharmacogenomics of chronic obstructive pulmonary disease.

Authors:  Craig P Hersh
Journal:  Expert Rev Respir Med       Date:  2019-04-08       Impact factor: 3.772

Review 2.  Genomic Predictors of Asthma Phenotypes and Treatment Response.

Authors:  Natalia Hernandez-Pacheco; Maria Pino-Yanes; Carlos Flores
Journal:  Front Pediatr       Date:  2019-02-05       Impact factor: 3.418

  2 in total

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