Literature DB >> 28705639

Genetic and epigenetic heterogeneity and the impact on cancer relapse.

Ciaran Hassan1, Ebrahim Afshinnekoo2, Sheng Li3, Shixiu Wu4, Christopher E Mason5.   

Abstract

Acute myeloid leukemia (AML) is an aggressive hematopoietic malignancy with an exceedingly poor prognosis: a 5-year overall survival rate of 40%-45% in the young and a 5-year survival rate of less than 10% in the elderly (>60 years of age). Although a high percentage of patients enters complete remission after chemotherapeutic intervention, the majority of patients relapse within 3 years. Such stark prognostic outcomes highlight the need for additional clinical research, basic discovery, and molecular delineation of the etiologies and mechanisms behind responses to therapy that lead to relapse. Here, we summarize recent discoveries in tumor heterogeneity at the genetic and epigenetic levels and their independent molecular trajectories and dynamics in response to therapy. These new discoveries may have significant implications for understanding, monitoring, and treating leukemia and other cancers.
Copyright © 2017 ISEH – Society for Hematology and Stem Cells. Published by Elsevier Inc. All rights reserved.

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Year:  2017        PMID: 28705639      PMCID: PMC5651672          DOI: 10.1016/j.exphem.2017.07.002

Source DB:  PubMed          Journal:  Exp Hematol        ISSN: 0301-472X            Impact factor:   3.084


  31 in total

1.  Gene mutation patterns and their prognostic impact in a cohort of 1185 patients with acute myeloid leukemia.

Authors:  Yang Shen; Yong-Mei Zhu; Xing Fan; Jing-Yi Shi; Qin-Rong Wang; Xiao-Jing Yan; Zhao-Hui Gu; Yan-Yan Wang; Bing Chen; Chun-Lei Jiang; Han Yan; Fei-Fei Chen; Hai-Min Chen; Zhu Chen; Jie Jin; Sai-Juan Chen
Journal:  Blood       Date:  2011-08-31       Impact factor: 22.113

2.  The origin and evolution of mutations in acute myeloid leukemia.

Authors:  John S Welch; Timothy J Ley; Daniel C Link; Christopher A Miller; David E Larson; Daniel C Koboldt; Lukas D Wartman; Tamara L Lamprecht; Fulu Liu; Jun Xia; Cyriac Kandoth; Robert S Fulton; Michael D McLellan; David J Dooling; John W Wallis; Ken Chen; Christopher C Harris; Heather K Schmidt; Joelle M Kalicki-Veizer; Charles Lu; Qunyuan Zhang; Ling Lin; Michelle D O'Laughlin; Joshua F McMichael; Kim D Delehaunty; Lucinda A Fulton; Vincent J Magrini; Sean D McGrath; Ryan T Demeter; Tammi L Vickery; Jasreet Hundal; Lisa L Cook; Gary W Swift; Jerry P Reed; Patricia A Alldredge; Todd N Wylie; Jason R Walker; Mark A Watson; Sharon E Heath; William D Shannon; Nobish Varghese; Rakesh Nagarajan; Jacqueline E Payton; Jack D Baty; Shashikant Kulkarni; Jeffery M Klco; Michael H Tomasson; Peter Westervelt; Matthew J Walter; Timothy A Graubert; John F DiPersio; Li Ding; Elaine R Mardis; Richard K Wilson
Journal:  Cell       Date:  2012-07-20       Impact factor: 41.582

Review 3.  The pivotal regulatory landscape of RNA modifications.

Authors:  Sheng Li; Christopher E Mason
Journal:  Annu Rev Genomics Hum Genet       Date:  2014-06-02       Impact factor: 8.929

Review 4.  International Standards for Genomes, Transcriptomes, and Metagenomes.

Authors:  Christopher E Mason; Ebrahim Afshinnekoo; Scott Tighe; Shixiu Wu; Shawn Levy
Journal:  J Biomol Tech       Date:  2017-03-17

Review 5.  Genomic applications in the clinic: use in treatment paradigm of acute myeloid leukemia.

Authors:  Richard F Schlenk; Hartmut Döhner
Journal:  Hematology Am Soc Hematol Educ Program       Date:  2013

6.  De novo acute myeloid leukemia with inv(3)(q21q26.2) or t(3;3)(q21;q26.2): a clinicopathologic and cytogenetic study of an entity recently added to the WHO classification.

Authors:  Jianlan Sun; Sergej N Konoplev; Xuemei Wang; Wei Cui; Su S Chen; L Jeffrey Medeiros; Pei Lin
Journal:  Mod Pathol       Date:  2010-11-26       Impact factor: 7.842

Review 7.  The challenge of risk stratification in acute myeloid leukemia with normal karyotype.

Authors:  Syed Z Zaidi; Tarek Owaidah; Fahad Al Sharif; Said Y Ahmed; Naeem Chaudhri; Mahmoud Aljurf
Journal:  Hematol Oncol Stem Cell Ther       Date:  2008 Jul-Sep

8.  Genomic and epigenomic landscapes of adult de novo acute myeloid leukemia.

Authors:  Timothy J Ley; Christopher Miller; Li Ding; Benjamin J Raphael; Andrew J Mungall; A Gordon Robertson; Katherine Hoadley; Timothy J Triche; Peter W Laird; Jack D Baty; Lucinda L Fulton; Robert Fulton; Sharon E Heath; Joelle Kalicki-Veizer; Cyriac Kandoth; Jeffery M Klco; Daniel C Koboldt; Krishna-Latha Kanchi; Shashikant Kulkarni; Tamara L Lamprecht; David E Larson; Ling Lin; Charles Lu; Michael D McLellan; Joshua F McMichael; Jacqueline Payton; Heather Schmidt; David H Spencer; Michael H Tomasson; John W Wallis; Lukas D Wartman; Mark A Watson; John Welch; Michael C Wendl; Adrian Ally; Miruna Balasundaram; Inanc Birol; Yaron Butterfield; Readman Chiu; Andy Chu; Eric Chuah; Hye-Jung Chun; Richard Corbett; Noreen Dhalla; Ranabir Guin; An He; Carrie Hirst; Martin Hirst; Robert A Holt; Steven Jones; Aly Karsan; Darlene Lee; Haiyan I Li; Marco A Marra; Michael Mayo; Richard A Moore; Karen Mungall; Jeremy Parker; Erin Pleasance; Patrick Plettner; Jacquie Schein; Dominik Stoll; Lucas Swanson; Angela Tam; Nina Thiessen; Richard Varhol; Natasja Wye; Yongjun Zhao; Stacey Gabriel; Gad Getz; Carrie Sougnez; Lihua Zou; Mark D M Leiserson; Fabio Vandin; Hsin-Ta Wu; Frederick Applebaum; Stephen B Baylin; Rehan Akbani; Bradley M Broom; Ken Chen; Thomas C Motter; Khanh Nguyen; John N Weinstein; Nianziang Zhang; Martin L Ferguson; Christopher Adams; Aaron Black; Jay Bowen; Julie Gastier-Foster; Thomas Grossman; Tara Lichtenberg; Lisa Wise; Tanja Davidsen; John A Demchok; Kenna R Mills Shaw; Margi Sheth; Heidi J Sofia; Liming Yang; James R Downing; Greg Eley
Journal:  N Engl J Med       Date:  2013-05-01       Impact factor: 91.245

9.  Independence of epigenetic and genetic diversity in AML.

Authors:  Daniel Sasca; Brian J P Huntly
Journal:  Nat Med       Date:  2016-07-07       Impact factor: 53.440

10.  Distinct evolution and dynamics of epigenetic and genetic heterogeneity in acute myeloid leukemia.

Authors:  Sheng Li; Francine E Garrett-Bakelman; Stephen S Chung; Mathijs A Sanders; Todd Hricik; Franck Rapaport; Jay Patel; Richard Dillon; Priyanka Vijay; Anna L Brown; Alexander E Perl; Joy Cannon; Lars Bullinger; Selina Luger; Michael Becker; Ian D Lewis; Luen Bik To; Ruud Delwel; Bob Löwenberg; Hartmut Döhner; Konstanze Döhner; Monica L Guzman; Duane C Hassane; Gail J Roboz; David Grimwade; Peter J M Valk; Richard J D'Andrea; Martin Carroll; Christopher Y Park; Donna Neuberg; Ross Levine; Ari M Melnick; Christopher E Mason
Journal:  Nat Med       Date:  2016-06-20       Impact factor: 53.440

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  12 in total

Review 1.  New strategies to treat AML: novel insights into AML survival pathways and combination therapies.

Authors:  Ramya Nair; Alejandro Salinas-Illarena; Hanna-Mari Baldauf
Journal:  Leukemia       Date:  2020-10-29       Impact factor: 11.528

2.  ImmunoPET, [64Cu]Cu-DOTA-Anti-CD33 PET-CT, Imaging of an AML Xenograft Model.

Authors:  Sargur Madabushi Srideshikan; Jamison Brooks; Darren Zuro; Bijender Kumar; James Sanchez; Liliana Echavarria Parra; Marvin Orellana; Paresh Vishwasrao; Indu Nair; Junie Chea; Kofi Poku; Nicole Bowles; Aaron Miller; Todd Ebner; Justin Molnar; Joseph Rosenthal; Daniel A Vallera; Jeffrey Y C Wong; Anthony S Stein; David Colcher; John E Shively; Paul J Yazaki; Susanta K Hui
Journal:  Clin Cancer Res       Date:  2019-09-23       Impact factor: 12.531

3.  Hypoxia-inducible transgelin 2 selects epithelial-to-mesenchymal transition and γ-radiation-resistant subtypes by focal adhesion kinase-associated insulin-like growth factor 1 receptor activation in non-small-cell lung cancer cells.

Authors:  In-Gyu Kim; Jei-Ha Lee; Seo-Yeon Kim; Hai-Min Hwang; Tae-Rim Kim; Eun-Wie Cho
Journal:  Cancer Sci       Date:  2018-10-10       Impact factor: 6.716

Review 4.  Single-Cell Sequencing in Normal and Malignant Hematopoiesis.

Authors:  Nicola K Wilson; Berthold Göttgens
Journal:  Hemasphere       Date:  2018-03-01

5.  The inhibitory effects of cisplatin-radiation combination treatment on malignant osteosarcoma MG-63 cells and BRCA1-p53 pathways are more efficient than single treatments.

Authors:  Hong-Bin Sun; He-Yuan Wang; Bing Wu; Zhong-Feng Wang; Li-Zhe Wang; Fu-Qiang Li; Jun-Duo Wu; Le-Ning Zhang
Journal:  Oncol Lett       Date:  2019-10-29       Impact factor: 2.967

6.  Patient-tailored design for selective co-inhibition of leukemic cell subpopulations.

Authors:  Aleksandr Ianevski; Jenni Lahtela; Komal K Javarappa; Philipp Sergeev; Bishwa R Ghimire; Prson Gautam; Markus Vähä-Koskela; Laura Turunen; Nora Linnavirta; Heikki Kuusanmäki; Mika Kontro; Kimmo Porkka; Caroline A Heckman; Pirkko Mattila; Krister Wennerberg; Anil K Giri; Tero Aittokallio
Journal:  Sci Adv       Date:  2021-02-19       Impact factor: 14.136

7.  Doxorubicin selectively induces apoptosis through the inhibition of a novel isoform of Bcl‑2 in acute myeloid leukaemia MOLM‑13 cells with reduced Beclin 1 expression.

Authors:  Milan Vu; Nick Kassouf; Rosemary Ofili; Torben Lund; Celia Bell; Sandra Appiah
Journal:  Int J Oncol       Date:  2020-04-23       Impact factor: 5.650

8.  Loss of CHD1 Promotes Heterogeneous Mechanisms of Resistance to AR-Targeted Therapy via Chromatin Dysregulation.

Authors:  Zeda Zhang; Chuanli Zhou; Xiaoling Li; Spencer D Barnes; Su Deng; Elizabeth Hoover; Chi-Chao Chen; Young Sun Lee; Yanxiao Zhang; Choushi Wang; Lauren A Metang; Chao Wu; Carla Rodriguez Tirado; Nickolas A Johnson; John Wongvipat; Kristina Navrazhina; Zhen Cao; Danielle Choi; Chun-Hao Huang; Eliot Linton; Xiaoping Chen; Yupu Liang; Christopher E Mason; Elisa de Stanchina; Wassim Abida; Amaia Lujambio; Sheng Li; Scott W Lowe; Joshua T Mendell; Venkat S Malladi; Charles L Sawyers; Ping Mu
Journal:  Cancer Cell       Date:  2020-03-26       Impact factor: 31.743

9.  Decelerated DNA methylation age predicts poor prognosis of breast cancer.

Authors:  Jun-Ting Ren; Mei-Xia Wang; Yi Su; Lu-Ying Tang; Ze-Fang Ren
Journal:  BMC Cancer       Date:  2018-10-17       Impact factor: 4.430

Review 10.  Resistance to FLT3 inhibitors in acute myeloid leukemia: Molecular mechanisms and resensitizing strategies.

Authors:  Jianbiao Zhou; Wee-Joo Chng
Journal:  World J Clin Oncol       Date:  2018-09-14
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