| Literature DB >> 28704403 |
Xingyang Yi1, Jing Lin2, Hua Luo3, Chun Wang1, Yingying Liu1.
Abstract
Eicosanoids may play a role in ischemic stroke. However, the associations of variants in cyclooxygenase (COX) pathway genes and interaction among these variants with carotid plaque vulnerability are not fully understood. In present study, twelve variants in COX pathway genes were examined using matrix-assisted laser desorption ionization time-of-flight mass spectrometry method in 396 patients with ischemic stroke and 291 controls. Platelet aggregation, platelet-leukocyte aggregates, and urine 11-dehydrothromboxane B2 (11-dTxB2) were also measured. According to the results of carotid high-resolution B-mode ultrasound, the patients were stratified into the following groups [i.e., non-carotid plaque and carotid plaque. The carotid plaque was further classified into subgroups of echolucent plaque (ELP) and echogenic plaque (EGP)]. Additionally, gene-gene interactions were analyzed to assess whether there was any interactive role for assessed variants in affecting carotid plaque vulnerability, platelet activation and 11-dTxB2 levels. There were no significant differences in the frequencies of genotypes of the twelve variants between patients and controls. Among 396 patients, 294 cases (74.2%) had carotid plaques (106 had ELP, 188 had EGP). Frequency of PTGS2 rs20417CC, TXAS1 rs2267679TT, TXAS1 rs41708TT, PTGIS rs5602CC, and TXA2R rs1131882TT genotype was significantly higher in patients with plaque compared with patients without plaque, or in patients with ELP compared with patients with EGP. 11-dTxB2 levels, platelet aggregation and platelet-leukocyte aggregates were significantly higher in patients with ELP compared with patients without plaque or with EGP. Multivariate logistic regression analysis revealed that PTGS2 rs20417CC, TXA2R rs1131882TT, and high-risk interaction among variants in PTGS2 rs20417, TXA2R rs1131882 and TXAS1 rs41708 were independently associated with the risk of ELP after adjusting for confounding variables. The variants in COX pathway genes and the high-risk interactions among variants in PTGS2 rs20417, TXA2R rs1131882 and TXAS1 rs41708 were associated with high 11-dTxB2 and platelet activation, and independently associated with the risk of carotid plaque vulnerability. These variants might be potential markers for plaque instability.Entities:
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Year: 2017 PMID: 28704403 PMCID: PMC5507514 DOI: 10.1371/journal.pone.0180704
Source DB: PubMed Journal: PLoS One ISSN: 1932-6203 Impact factor: 3.240
Clinical characteristics of patients with or without carotid plaques.
| Characteristics | ELP (n = 106) | EGP (n = 188) | Non- plaque (n = 102) | |
|---|---|---|---|---|
| Age (years) | 68.62± 10.84 | 68.13 ± 11.92 | 67.94 ± 11.86 | 0.535 |
| Men (n, %) | 62 (58.49) | 112 (59.57) | 61 (59.80) | 0.912 |
| Diabetes mellitus (n, %) | 50 (47.17) | 64 (34.04) | 24 (23.53) | 0.008 |
| Hypertension (n, %) | 95 (89.62) | 140 (74.47) | 52 (50.98) | <0.001 |
| Previous MI (n, %) | 1 (0.94) | 2 (1.06) | 2 (1.96) | 0.986 |
| Current smoking (n, %) | 45 (42.45) | 75 (39.89) | 40 (39.22) | 0.898 |
| Body mass index (kg/m2) | 24.09 ± 2.51 | 24.02 ± 2.59 | 23.96 ± 2.64 | 0.582 |
| TC (mM) | 5.62 ± 1.38 | 5.53± 1.32 | 5.36 ± 1.21 | 0.016 |
| LDL-C (mM) | 3.13 ± 1.23 | 2.93 ± 1.20 | 2.99 ± 1.19 | 0.183 |
| HDL-C(mM) | 1.22 ± 0.47 | 1.22 ± 0.53 | 1.23 ± 0.51 | 0.782 |
| TG (mM) | 1.92 ± 1.09 | 1.87 ± 1.11 | 1.83 ± 1.02 | 0.512 |
| Fasting blood-glucose (mM) | 7.08 ± 2.14 | 6.99±2.09 | 6.86 ± 2.35 | 0.315 |
| HbA1c (%) | 6.22 ± 1.38 | 6.11±1.35 | 6.04 ± 1.49 | 0.136 |
| Previous or ongoing drug treatments (n, %) | ||||
| Antihypertensive drugs | 32 (30.19) | 57 (30.32) | 32 (31.37) | 0.893 |
| Hypoglycemic drugs | 29 (27.36) | 47 (25.00) | 19 (18.63) | 0.127 |
| Statins | 14 (13.21) | 25 (13.29) | 12 (11.76) | 0.336 |
| Antiplatelet drugs | 21 (19.81) | 39 (20.75) | 23 (22.55) | 0.875 |
| Stroke subtype (n, %) | ||||
| AT stroke | 78 (73.58) | 135 (71.81) | 63 (61.76) | 0.046 |
| SAD stroke | 28 (26.42) | 53 (28.19) | 39 (38.24) | - |
MI, myocardial infarction; TC, total cholesterol; LDL-C, low-density lipoprotein cholesterol; HDL-C, high-density lipoprotein cholesterol; TG, triglycerides; HbA1c, Hemoglobin A1C; ELP, echolucent plaque; EGP, echogenic plaque; AT, atherothrombotic; SAD, small artery disease.
Genotype distribution, 11-dTxB2, platelet aggregation and platelet-leukocyte aggregates comparison among the three groups (n, %).
| ELP (n = 106) | EGP (n = 188) | Non- plaque (n = 102) | ||
|---|---|---|---|---|
| CC | 102 (96.2) | 184 (99.1) | 100 (98.0) | 0.936 |
| CT | 4 (3.8) | 4 (2.1) | 2 (2.0) | |
| TT | 0 | 0 | 0 | |
| CC | 82 (77.4) | 142 (75.5) | 80 (78.4) | 0.983 |
| CT | 16 (15.1) | 31 (16.5) | 15 (14.7) | |
| TT | 8 (7.5) | 15 (8.0) | 7 (6.9) | |
| AA | 30 (28.3) | 55 (29.3) | 27 (26.5) | 0.734 |
| AG | 53 (50.0) | 91 (48.4) | 50 (49.0) | |
| GG | 23 (21.7) | 42 (22.3) | 25 (24.5) | |
| GG | 57 (53.8) | 116 (61.7) | 72 (70.6) | 0.021 |
| GC | 26 (24.5) | 43 (22.9) | 24 (23.5) | |
| CC | 23 (21.7) | 29 (15.4) | 6 (5.9) | |
| AA | 17 (16.0) | 33 (17.5) | 15 (14.7) | 0.916 |
| AG | 53 (50.0) | 90 (47.9) | 54 (52.9) | |
| GG | 36 (34.0) | 65 (34.6) | 33 (32.4) | |
| CC | 2 (1.9) | 8 (4.3) | 1 (0.9) | <0.001 |
| CT | 14 (13.2) | 42 (22.3) | 35 (34.3) | |
| TT | 90 (84.9) | 138 (73.4) | 66 (64.7) | |
| GG | 53 (50.0) | 114 (60.6) | 72 (70.6) | <0.001 |
| GT | 30 (28.3) | 55 (29.3) | 25 (24.5) | |
| TT | 23 (21.7) | 19 (10.1) | 5 (4.9) | |
| GG | 106 (100) | 188 (100) | 102 (100) | -- |
| TT | 32 (30.2) | 71 (37.8) | 47 (46.1) | 0.008 |
| TC | 47 (44.3) | 89 (47.3) | 49 (48.0) | |
| CC | 27 (25.5) | 28 (14.9) | 6 (5.9) | |
| AA | 7 (6.6) | 13 (6.9) | 6 (5.9) | 0.962 |
| AC | 36 (34.0) | 62 (33.0) | 31(30.4) | |
| CC | 63 (59.4) | 113 (60.1) | 65 (63.7) | |
| AA | 91 (85.8) | 165 (87.8) | 88 (86.3) | 0.968 |
| AG | 13 (12.3) | 20 (10.6) | 13 (12.7) | |
| GG | 2 (1.9) | 3 (1.6) | 1 (1.0) | |
| CC | 28 (26.4) | 65 (34.6) | 42 (41.2) | 0.009 |
| CT | 47 (44.3) | 87 (46.3) | 50 (49.0) | |
| TT | 31 (29.2) | 36 (19.1) | 10 (9.8) | |
| 11-dTxB2 (ng/mmol creat) | 204.6 ± 73.2 | 158.9 ± 61.3 | 129.7 ± 57.6 | <0.001 |
| Platelet aggregation (%) | ||||
| AA-induced | 91.2 ± 11.4 | 86.9 ± 10.4 | 84.6 ± 11.7 | 0.002 |
| ADP-induced | 89.7 ± 12.1 | 86.1 ± 11.5 | 84.7 ± 10.8 | 0.008 |
| Platelet-leukocyte aggregates (%) | ||||
| Leukocyte | 28.1 ± 6.7 | 23.8 ± 5.4 | 22.8 ± 7.2 | <0.001 |
| Neutrophil | 27.2 ± 6.8 | 22.9 ± 7.1 | 22.2 ± 6.4 | <0.001 |
| Monocyte | 26.9 ± 5.5 | 22.3 ± 6.3 | 21.8 ± 4.7 | <0.001 |
| Lymphocyte | 26.4 ± 5.6 | 22.4 ± 7.5 | 21.8 ± 5.8 | <0.001 |
11-dTxB2, 11-dehydro-thromboxane B2; Creat, creatine; AA, arachidonic acid; ADP, adenosine diphosphate.
Comparison of the best models, prediction accuracies, cross-validation consistencies, and P values for echolucent plaque identified by GMDR.
| Best model | Training balanced accuracy | Testing balanced accuracy | Cross-validationconsistency | Sign test ( |
|---|---|---|---|---|
| 1 | 0.468 | 0.612 | 5/10 | 7 (0.463) |
| 1, 2 | 0.547 | 0.622 | 9/10 | 9 (0.268) |
| 1, 2, 3 | 0.697 | 0.663 | 10/10 | 9 (0.017) |
| 1, 2, 3, 4 | 0.622 | 0.602 | 8/10 | 8 (0.314) |
| 1, 2, 3, 4, 5 | 0.575 | 0.496 | 7/10 | 7 (0.613) |
| 1, 2, 3, 4, 5, 6 | 0.614 | 0.521 | 6/10 | 8 (0.542) |
| 1, 2, 3, 4, 5, 6, 7 | 0.527 | 0.466 | 7/10 | 5 (0.725) |
| 1, 2, 3, 4, 5, 6, 7, 8 | 0.645 | 0.562 | 8/10 | 6 (0.313) |
| 1, 2, 3, 4, 5, 6, 7, 8, 9 | 0.602 | 0.554 | 7/10 | 7 (0.685) |
| 1, 2, 3, 4, 5, 6, 7, 8, 9, 10 | 0.578 | 0.564 | 6/10 | 5 (0.782) |
| 1, 2, 3, 4, 5, 6, 7, 8, 9, 10,11 | 0.485 | 0.643 | 8/10 | 6 (0.325) |
| 1, 2, 3, 4, 5, 6, 7, 8, 9, 10,11,12 | 0.511 | 0.572 | 6/10 | 7 (0.413) |
*rs20417, rs1131882, rs41708, rs5602, rs1236913, rs3842787, rs689466, rs194149, rs2267679, rs45498106, rs5629, rs6478818 are symbolized as 1–12, respectively.
GMDR, generalized multifactor dimensionality reduction.
Associations between genotype combinations and echolucent plaque.
| rs20417 | GG | CC | CC | CC | GC | CC | CC, GC | CC, GC |
|---|---|---|---|---|---|---|---|---|
| rs1131882 | CC | TT | CT | TT | CT | TT, CT | TT | TT, CT |
| rs41708 | GG | TT | GT | GT,TT | GT | TT | TT | TT, GT |
| OR | 1 | 2.72 | 2.18 | 2.04 | 1.21 | 1.02 | 1.03 | 1.12 |
| 95% CI | - | 1.31–8.27 | 1.14–6.65 | 1.02–4.97 | 0.89–2.68 | 0.68–1.99 | 0.71–1.94 | 0.94–2.01 |
| P value | - | 0.003 | 0.019 | 0.031 | 0.224 | 0.546 | 0.612 | 0.336 |
* The low-risk genotype for each genetic factor was used as the reference OR. OR, odds ratio; CI, confidence interva.
Multivariate analysis of the major risk factors for echolucent plaques.
| Risk factor | 95% CI | ||
|---|---|---|---|
| Hypertension | 1.88 | 1.02–3.42 | 0.043 |
| Diabetes mellitus | 0.94 | 0.75–1.76 | 0.473 |
| AT stroke | 0.72 | 0.63–1.25 | 0.823 |
| TC | 0.74 | 0.65–1.46 | 0.578 |
| rs20417CC | 1.94 | 1.02–3.85 | 0.035 |
| rs2267679TT | 1.16 | 0.95–2.14 | 0.156 |
| rs41708TT | 1.32 | 0.98–2.96 | 0.106 |
| rs5602CC | 1.05 | 0.89–1.96 | 0.268 |
| rs1131882TT | 2.02 | 1.13–5.32 | 0.026 |
| High-risk interactions | 2.42 | 1.36–7.64 | 0.005 |
OR, odds ratios; CI, confidence interval; AT, atherothrombotic; TC, total cholesterol.
Comparison of 11-dTxB2, platelet aggregation and platelet-leukocyte aggregates among genotypes.
| 1 | 11-dTxB2 Platelet aggregation (%) (ng/mmol creat) AA-induced ADP-induced | Platelet-leukocyte aggregates (%) Leukocyte Neutrophil Monocyte Lymphocyte | |||||
|---|---|---|---|---|---|---|---|
| rs20417 | |||||||
| GG (n = 245) | 128.3 ± 54.5 | 84.2 ± 14.7 | 84.6 ± 13.6 | 23.3 ± 5.6 | 22.7 ± 4.9 | 23.1 ± 5.8 | 22.7 ± 4.7 |
| GC (n = 93) | 149.8 ± 60.5 | 85.1 ± 10.5 | 83.9 ± 11.2 | 22.8 ± 5.2 | 23.0 ± 4.3 | 22.6 ± 4.2 | 23.4 ± 3.8 |
| CC (n = 58) | 208.4 ± 72.4 | 90.2 ± 10.1 | 89.7 ± 9.8 | 27.7 ± 4.4 | 26.9 ± 3.6 | 26.7 ± 4.6 | 26.8 ± 4.5 |
| <0.001 | 0.011 | <0.001 | <0.001 | <0.001 | <0.001 | <0.001 | |
| rs2267679 | |||||||
| CC (n = 11) | 118.6 ± 32.4 | 83.2 ± 8.4 | 83.1 ± 11.7 | 22.8 ± 3.4 | 23.1 ± 2.8 | 22.7 ± 3.2 | 23.2 ± 2.7 |
| CT (n = 91) | 138.8 ± 56.7 | 84.3 ± 9.6 | 84.2 ± 10.9 | 22.9 ± 4.1 | 22.9 ± 4.2 | 23.4 ± 4.7 | 23.3 ± 4.8 |
| TT (n = 294) | 212.4 ± 80.8 | 89.9 ± 14.3 | 89.7 ± 13.3 | 26.6 ± 5.2 | 26.8 ± 5.7 | 26.8 ± 6.3 | 26.7 ± 5.5 |
| <0.001 | 0.017 | 0.036 | <0.001 | <0.001 | <0.001 | <0.001 | |
| rs41708 | |||||||
| GG (n = 239) | 138.7 ± 81.5 | 85.2 ± 14.8 | 84.2 ± 13.6 | 22.7 ± 5.8 | 22.6 ± 5.7 | 22.5 ± 5.7 | 22.8 ± 4.9 |
| GT (n = 110) | 139.7 ± 61.4 | 84.3 ± 11.3 | 83.7 ± 12.2 | 22.8 ± 4.7 | 22.2 ± 3.8 | 23.1 ± 4.5 | 23.5 ± 4.1 |
| TT (n = 47) | 209.4 ± 48.7 | 90.7 ± 9.3 | 91.2 ± 10.2 | 27.2 ± 6.3 | 26.9 ± 4.5 | 27.2 ± 4.6 | 26.9 ± 3.2 |
| <0.001 | <0.001 | <0.001 | <0.001 | <0.001 | <0.001 | <0.001 | |
| rs5602 | |||||||
| TT (n = 150) | 154.7 ± 63.4 | 84.6 ± 12.4 | 84.4 ± 13.4 | 22.6 ± 4.4 | 22.5 ± 4.5 | 23.1 ± 3.9 | 22.6 ± 5.8 |
| TC (n = 185) | 163.2 ± 71.4 | 85.1 ± 13.2 | 84.6 ± 12.6 | 23.4 ± 4.6 | 23.2 ± 4.3 | 22.5 ± 4.9 | 22.2 ± 5.3 |
| CC (n = 61) | 178.9 ± 60.7 | 88.8 ± 10.3 | 89.4 ± 10.6 | 27.2 ± 5.2 | 27.1 ± 4.3 | 27.1 ± 3.8 | 26.9 ± 4.2 |
| 0.795 | 0.024 | 0.007 | <0.001 | <0.001 | <0.001 | <0.001 | |
| rs1131882 | |||||||
| CC (n = 135) | 161.2 ± 78.7 | 85.4 ± 12.2 | 84.8 ± 12.4 | 22,3 ± 5.5 | 22.8 ± 5.6 | 23.1 ± 5.2 | 22.7 ± 6.4 |
| CT (n = 184) | 157.2 ± 81.5 | 84.9 ± 13.6 | 85.1 ± 11.9 | 22.6 ± 3.9 | 23.2 ± 4.4 | 22.8 ± 4.2 | 22.2 ± 5.3 |
| TT (n = 77) | 182.7 ± 54.7 | 90.2± 11.2 | 89.9 ± 10.4 | 26.9 ± 3.8 | 27.1 ± 3.4 | 27.2 ± 5.8 | 26.9 ± 4.8 |
| 0.862 | 0.005 | 0.004 | <0.001 | <0.001 | <0.001 | <0.001 | |
| High-risk interactions | |||||||
| Yes (n = 86) | 232.5 ± 56.7 | 90.6 ± 11.8 | 89.9 ± 12.7 | 26.7 ± 5.6 | 27.1 ± 6.2 | 27.3 ± 4.8 | 26.9 ± 5.6 |
| No (n = 310) | 131.4 ± 88.6 | 85.6 ± 14.8 | 85.4 ± 13.2 | 23.2 ± 6.9 | 23.2 ± 5.3 | 23.8 ± 7.2 | 22.3 ± 3.9 |
| | <0.001 | 0.002 | 0.006 | <0.001 | <0.001 | <0.001 | <0.001 |
AA, arachidonic acid; ADP, adenosine diphosphate. Creat, creatine; 11-dTxB2, 11-dehydro-thromboxane B2.