Emilio Letang1, Aneth Vedastus Kalinjuma2, Tracy R Glass3, Anna Gamell4, Herry Mapesi5, George Rocky Sikalengo5, Lameck Bonaventure Luwanda5, Dorcas Mnzava5, Alex J Ntamatungiro3, Regina Ndaki6, Gideon Francis6, Fiona Vanobberghen3, Hansjakob Furrer7, Thomas Klimkait8, Ingrid Felger3, Marcel Tanner3, Christoph Hatz3, Maja Weisser4, Manuel Battegay9. 1. ISGlobal, Barcelona Centre for International Health Research (CRESIB), Hospital Clínic Universitat de Barcelona, Spain; Ifakara Health Institute, Ifakara, Tanzania; Swiss Tropical and Public Health Institute, Basel, Switzerland; University of Basel, Swit. 2. ISGlobal, Barcelona Centre for International Health Research (CRESIB), Hospital Clínic Universitat de Barcelona, Spain. 3. Swiss Tropical and Public Health Institute, Basel, Switzerland; University of Basel, Switzerland. 4. Ifakara Health Institute, Ifakara, Tanzania; Swiss Tropical and Public Health Institute, Basel, Switzerland; University of Basel, Switzerland. 5. Ifakara Health Institute, Ifakara, Tanzania. 6. Saint Francis Referral Hospital Ifakara, Tanzania. 7. Department of Infectious Diseases, Bern University Hospital, University of Bern, Switzerland. 8. University of Basel, Switzerland; University of Basel, Molecular Virology, Department Biomedicine Petersplatz, Basel, Switzerland. 9. University of Basel, Switzerland; Division of Infectious Diseases and Hospital Epidemiology, University Hospital Basel, University of Basel, Switzerland.
Abstract
BACKGROUND: The Kilombero and Ulanga Antiretroviral Cohort (KIULARCO) is a single-site, open and ongoing prospective cohort of people living with human immunodeficiency virus (PLWHIV) established in 2005 at the Chronic Diseases Clinic of Ifakara (CDCI), within the Saint Francis Referral Hospital (SFRH) in Ifakara, Tanzania. The objectives of KIULARCO are to (i) provide patient and cohort-level information on the outcomes of HIV treatment; (ii) provide cohort-level information on opportunistic infections and comorbidities; (iii) evaluate aspects of human immunodeficiency virus (HIV) care and treatment that have national or international policy relevance; (iv) provide a platform for studies on improving HIV care and treatment in sub-Saharan Africa; and (v) contribute to generating local capacity to deal with the challenges posed by the HIV/AIDS pandemic in this region. Moreover, KIULARCO may serve as a model for other healthcare settings in rural sub-Saharan Africa. METHODS: Since 2005, all patients diagnosed with HIV at the Saint Francis Referral Hospital are invited to participate in the cohort, including non-pregnant adults, pregnant women, adolescents, children and infants. The information collected includes demographics, baseline and follow-up clinical data, laboratory data, medication history, drug toxicities, diagnoses and outcomes. Real-time data are captured during the patient encounter through an electronic medical record system that allowed transition to a paperless clinic in 2013. In addition, KIULARCO is associated with a biobank of cryopreserved plasma samples and cell pellets collected from all participants before and at different time-points during antiretroviral treatment. RESULTS: Up to the end of 2016, 12 185 PLWHIV have been seen at the CDCI; 9218 (76%) of whom have been enrolled into KIULARCO and 6965 (76%) of these have received ART from the clinic. Patients on ART attend at least every 3 months, with laboratory monitoring every 6 months. KIULARCO data have been used to generate relevant information regarding ART outcomes, opportunistic infections, non-AIDS comorbidities, prevention of mother-to-child transmission of HIV, paediatric HIV, and mortality and retention in care. Requests for collaborations on analyses can be submitted to the KIULARCO scientific committee. CONCLUSIONS: KIULARCO provides a framework for improving the quality of care of people living with HIV in sub-Saharan Africa, to generate relevant information to evaluate ART programmes and to build local capacity to deal with HIV/AIDS. The comprehensiveness of the data collected, together with the biobank spanning over ten years has created a unique research platform in rural sub-Saharan Africa.
BACKGROUND: The Kilombero and Ulanga Antiretroviral Cohort (KIULARCO) is a single-site, open and ongoing prospective cohort of people living with human immunodeficiency virus (PLWHIV) established in 2005 at the Chronic Diseases Clinic of Ifakara (CDCI), within the Saint Francis Referral Hospital (SFRH) in Ifakara, Tanzania. The objectives of KIULARCO are to (i) provide patient and cohort-level information on the outcomes of HIV treatment; (ii) provide cohort-level information on opportunistic infections and comorbidities; (iii) evaluate aspects of human immunodeficiency virus (HIV) care and treatment that have national or international policy relevance; (iv) provide a platform for studies on improving HIV care and treatment in sub-Saharan Africa; and (v) contribute to generating local capacity to deal with the challenges posed by the HIV/AIDS pandemic in this region. Moreover, KIULARCO may serve as a model for other healthcare settings in rural sub-Saharan Africa. METHODS: Since 2005, all patients diagnosed with HIV at the Saint Francis Referral Hospital are invited to participate in the cohort, including non-pregnant adults, pregnant women, adolescents, children and infants. The information collected includes demographics, baseline and follow-up clinical data, laboratory data, medication history, drug toxicities, diagnoses and outcomes. Real-time data are captured during the patient encounter through an electronic medical record system that allowed transition to a paperless clinic in 2013. In addition, KIULARCO is associated with a biobank of cryopreserved plasma samples and cell pellets collected from all participants before and at different time-points during antiretroviral treatment. RESULTS: Up to the end of 2016, 12 185 PLWHIV have been seen at the CDCI; 9218 (76%) of whom have been enrolled into KIULARCO and 6965 (76%) of these have received ART from the clinic. Patients on ART attend at least every 3 months, with laboratory monitoring every 6 months. KIULARCO data have been used to generate relevant information regarding ART outcomes, opportunistic infections, non-AIDS comorbidities, prevention of mother-to-child transmission of HIV, paediatric HIV, and mortality and retention in care. Requests for collaborations on analyses can be submitted to the KIULARCO scientific committee. CONCLUSIONS: KIULARCO provides a framework for improving the quality of care of people living with HIV in sub-Saharan Africa, to generate relevant information to evaluate ART programmes and to build local capacity to deal with HIV/AIDS. The comprehensiveness of the data collected, together with the biobank spanning over ten years has created a unique research platform in rural sub-Saharan Africa.
Authors: Anna Gamell; Lameck Bonaventure Luwanda; Aneth Vedastus Kalinjuma; Leila Samson; Alex John Ntamatungiro; Maja Weisser; Winfrid Gingo; Marcel Tanner; Christoph Hatz; Emilio Letang; Manuel Battegay Journal: PLoS One Date: 2017-07-12 Impact factor: 3.240
Authors: Herry Mapesi; Aneth V Kalinjuma; Alphonce Ngerecha; Fabian Franzeck; Christoph Hatz; Marcel Tanner; Michael Mayr; Hansjakob Furrer; Manuel Battegay; Emilio Letang; Maja Weisser; Tracy R Glass Journal: Open Forum Infect Dis Date: 2018-04-06 Impact factor: 3.835
Authors: Robert Ndege; Maja Weisser; Luigia Elzi; Flavia Diggelmann; Farida Bani; Winfrid Gingo; George Sikalengo; Herry Mapesi; Elisante Mchomvu; Lujeko Kamwela; Dorcas Mnzava; Manuel Battegay; Klaus Reither; Daniel H Paris; Martin Rohacek Journal: Open Forum Infect Dis Date: 2019-04-25 Impact factor: 3.835
Authors: Armon Arpagaus; Fabian Christoph Franzeck; George Sikalengo; Robert Ndege; Dorcas Mnzava; Martin Rohacek; Jerry Hella; Klaus Reither; Manuel Battegay; Tracy Renee Glass; Daniel Henry Paris; Farida Bani; Omary Ngome Rajab; Maja Weisser Journal: PLoS One Date: 2020-03-04 Impact factor: 3.240
Authors: Rahel E Bircher; Alex J Ntamatungiro; Tracy R Glass; Dorcas Mnzava; Amina Nyuri; Herry Mapesi; Daniel H Paris; Manuel Battegay; Thomas Klimkait; Maja Weisser Journal: PLoS One Date: 2020-01-13 Impact factor: 3.240
Authors: Robert Ndege; Omary Ngome; Farida Bani; Yvan Temba; Herieth Wilson; Fiona Vanobberghen; Jerry Hella; Winfrid Gingo; Mohamed Sasamalo; Dorcas Mnzava; Namvua Kimera; Helen Hiza; John Wigayi; Herry Mapesi; Irene B Kato; Francis Mhimbira; Klaus Reither; Manuel Battegay; Daniel H Paris; Maja Weisser; Martin Rohacek Journal: BMC Infect Dis Date: 2020-05-15 Impact factor: 3.090
Authors: Katarina Stete; Tracy R Glass; Govert J van Dam; Alex Ntamatungiro; Emilio Letang; Claudia J de Dood; Paul L A M Corstjens; Robert Ndege; Herry Mapesi; Winfried V Kern; Christoph Hatz; Maja Weisser; Jürg Utzinger; Matthias C Müller Journal: PLoS Negl Trop Dis Date: 2018-10-17
Authors: Catherine Gerald Mkindi; Elias Antony Marandu; Ngisi Masawa; Farida Bani; Amina Nyuri; Theonestina Byakuzana; Thomas Klimkait; Song Ding; Giuseppe Pantaleo; Manuel Battegay; Nina Orlova-Fink; Maja Weisser-Rohacek; Claudia Daubenberger Journal: BMC Res Notes Date: 2019-09-06