| Literature DB >> 28694894 |
David M Hinkle1, Nicole A Kruh-Garcia2, Jonathan N Kruh3, Carolyn Broccardo4, Priyanka Doctor5, C Stephen Foster5,6,7.
Abstract
PURPOSE: The aim was to report the aqueous humor moxifloxacin concentration and proteome profile of an individual with bilateral uveitis-like syndrome with pigment dispersion.Entities:
Year: 2017 PMID: 28694894 PMCID: PMC5481612 DOI: 10.2174/1874364101711010107
Source DB: PubMed Journal: Open Ophthalmol J ISSN: 1874-3641
Results of calibration curve calculation and determination of limits of detection and quantitation.
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| 358.00 | 0.98 | 51.42 | 25.83 | 86.11 |
| 384.00 | 0.97 | 63.29 | 12.34 | 41.13 |
Concentration of moxifloxacin in the patient samples. The transition ion m/z 358 was well above both the LOD and LOQ in both of the samples and therefore was used to quantitate the amount of moxifloxacin in the original more dilute samples. The transition ion m/z 384 was below the LOQ and could not be used to quantitate the amount of moxifloxacin, however since the concentration was above that of the LOD we can use it as a confirmatory ion, enhancing the confidence of the detection.
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| OD | 358.00 | Quantitation | 268.32 | 44.72 |
| OD | 384.00 | Confirmation | 20.73 | below LOQ |
| OS | 358.00 | Quantitation | 101.33 | 93.82 |
| OS | 384.00 | Confirmation | 27.38 | below LOQ |
List of proteins identified in the control and two patient samples. Three technical replicates were performed for each biological sample and the spectral counts determined for each is listed. A single protein which matched to the reverse database (in bold) is responsible for the FDR rate of 3%.
| # | Identified Proteins (33) |
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| 1 | Serum albumin | 1065 | 1008 | 1158 | 1157 | 1412 | 1049 | 1418 | 1253 | 1062 |
| 2 | Serotransferrin | 197 | 241 | 231 | 99 | 125 | 47 | 112 | 115 | 41 |
| 3 | Alpha-1-antitrypsin | 13 | 9 | 12 | 24 | 23 | 17 | 23 | 16 | 20 |
| 4 | Ig gamma-1 chain C region | 22 | 31 | 17 | 11 | 12 | 8 | 11 | 8 | 3 |
| 5 | Prostaglandin-H2 D-isomerase | 28 | 37 | 29 | 12 | 8 | 1 | 3 | 11 | 2 |
| 6 | Transthyretin | 15 | 16 | 12 | 24 | 25 | 7 | 20 | 13 | 7 |
| 7 | Ig kappa chain C region | 13 | 22 | 24 | 8 | 7 | 4 | 16 | 6 | 2 |
| 8 | Alpha-1-acid glycoprotein 1 | 9 | 9 | 9 | 20 | 14 | 8 | 14 | 10 | 7 |
| 9 | Hemopexin | 7 | 7 | 7 | 22 | 18 | 8 | 9 | 6 | 1 |
| 10 | Ig lambda-2 chain C regions | 15 | 17 | 13 | 12 | 8 | 1 | 15 | 16 | 6 |
| 11 | Complement component C4B | 8 | 8 | 8 | 8 | 7 | 4 | 5 | 9 | 3 |
| 12 | Pigment epithelium-derived factor | 16 | 17 | 14 | 3 | 5 | 1 | 5 | 3 | 2 |
| 13 | Vitamin D-binding protein | 2 | 4 | 4 | 6 | 6 | 6 | 8 | 10 | 5 |
| 14 | Ceruloplasmin | 7 | 8 | 12 | 2 | 3 | 1 | 1 | 1 | 1 |
| 15 | Alpha-1B-glycoprotein | 1 | 7 | 8 | 5 | 4 | 3 | 5 | 9 | 6 |
| 16 | Isoform 2 of Clusterin | 14 | 5 | 4 | 8 | 7 | 2 | 4 | 6 | 3 |
| 17 | Apolipoprotein A-I | 3 | 0 | 5 | 8 | 3 | 4 | 5 | 7 | 3 |
| 18 | F-box/SPRY domain-containing protein 1 | 0 | 1 | 0 | 2 | 2 | 1 | 0 | 0 | 0 |
| 19 | Zinc-alpha-2-glycoprotein | 6 | 3 | 6 | 2 | 3 | 2 | 3 | 4 | 1 |
| 20 | Hemoglobin subunit beta | 7 | 9 | 9 | 0 | 0 | 0 | 2 | 0 | 0 |
| 21 | Alpha-1-antichymotrypsin His-Pro-less | 5 | 2 | 3 | 10 | 11 | 1 | 4 | 3 | 3 |
| 22 | Retinol-binding protein 3 | 5 | 3 | 8 | 1 | 1 | 0 | 2 | 1 | 1 |
| 23 | Complement C3 | 1 | 0 | 0 | 4 | 5 | 1 | 2 | 1 | 3 |
| 24 | Ig gamma-2 chain C region | 13 | 11 | 16 | 0 | 0 | 0 | 0 | 0 | 0 |
| 25 | Ig gamma-4 chain C region | 8 | 10 | 13 | 0 | 0 | 0 | 0 | 2 | 0 |
| 26 | Apolipoprotein A-II | 3 | 2 | 2 | 2 | 4 | 2 | 0 | 0 | 2 |
| 27 | Haptoglobin | 1 | 1 | 2 | 1 | 2 | 1 | 3 | 1 | 1 |
| 28 | Alpha-2-HS-glycoprotein chain A | 0 | 1 | 1 | 3 | 1 | 4 | 0 | 0 | 0 |
| 29 | Antithrombin-III | 0 | 0 | 0 | 2 | 1 | 3 | 0 | 0 | 0 |
| 30 | Ig gamma-3 chain C region | 12 | 11 | 6 | 0 | 0 | 0 | 0 | 0 | 0 |
| 31 | Gelsolin | 0 | 0 | 3 | 0 | 0 | 0 | 0 | 0 | 0 |
| 32 | Protein shisa-7 | 0 | 0 | 0 | 0 | 2 | 0 | 0 | 0 | 0 |
| 33 | Dickkopf-related protein 3 | 0 | 3 | 0 | 2 | 1 | 0 | 0 | 0 | 1 |
List of proteins found to be reduced significantly by ANOVA in the patient samples compared to the control.
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| Ig gamma-1 chain C region | IGHG1_HUMAN | 0.022 |
| Retinol-binding protein 3 | RET3_HUMAN | 0.016 |
| Serotransferrin | TRFE_HUMAN | 0.011 |
| Prostaglandin-H2 D-isomerase | PTGDS_HUMAN | 0.0028 |
| Ig gamma-3 chain C region | IGHG3_HUMAN | 0.0027 |
| Ceruloplasmin | CERU_HUMAN | 0.0014 |
| Pigment epithelium-derived factor | PEDF_HUMAN | 0.00053 |
| Hemoglobin subunit beta | HBB_HUMAN | 0.000059 |
| Ig gamma-4 chain C region | IGHG4_HUMAN | 0.00004 |
| Ig gamma-2 chain C region | IGHG2_HUMAN | 0.0000056 |