Literature DB >> 28691654

Thalassotalea crassostreae sp. nov., isolated from Pacific oyster.

Sungmi Choi1, Eunji Kim1, Su-Kyoung Shin1, Hana Yi1,2.   

Abstract

A Gram-staining-negative, aerobic, rod-shaped bacterial strain, designated LPB0090T, was isolated from the Pacific oyster, Crassostreagigas, collected from the Yeongheung Island, Korea (37° 15' 16.1″ N; 126° 29' 46.5″ E). The complete genome sequence of LPB0090T (accession number CP017689) was 3 861 670 bp long with a DNA G+C content of 38.8 mol%. The genome included 3245 protein-coding genes and six copies of rRNA operons. On the basis of the results of 16S rRNA gene sequence analysis, LPB0090T was found to form an independent phyletic line within the genus Thalassotalea, with 94.7-96.0 % sequence similarities to the previously known species of the genus. The isoprenoid quinone (Q-8) and major fatty acids (C16 : 0, C17 : 1 ω8c, and C16 : 1 ω7c and/or C16 : 1 ω6c) of the isolate were similar to those of the other members of the genus Thalassotalea. A number of phenotypic features, however, distinguished LPB0090T from its closest neighbour Thalassotalea ponticola as well as other species of the genus Thalassotalea. On the basis of the phylogenetic, genomic and phenotypic data presented in this study, the strain was classified as representing a novel species of the genus Thalassotalea. Therefore, the name Thalassotalea crassostreae sp. nov. is proposed for the isolate. The type strain is LPB0090T (=KACC 18695T=JCM 31189T).

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Year:  2017        PMID: 28691654     DOI: 10.1099/ijsem.0.001923

Source DB:  PubMed          Journal:  Int J Syst Evol Microbiol        ISSN: 1466-5026            Impact factor:   2.747


  4 in total

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Authors:  Erik Munson; Karen C Carroll
Journal:  J Clin Microbiol       Date:  2019-01-30       Impact factor: 5.948

2.  Full-Genome Sequence of Thalassotalea euphylliae H1, Isolated from a Montipora capitata Coral Located in Hawai'i.

Authors:  Stephen Summers; Marnie L Freckelton; Brian T Nedved; Scott A Rice; Michael G Hadfield
Journal:  Microbiol Resour Announc       Date:  2018-11-21

3.  Complete Genome Sequence of Thalassotalea euphylliae Strain H2.

Authors:  Stephen Summers; Marnie L Freckelton; Brian T Nedved; Scott A Rice; Michael G Hadfield
Journal:  Microbiol Resour Announc       Date:  2019-01-24

4.  Genomics Reveals the Metabolic Potential and Functions in the Redistribution of Dissolved Organic Matter in Marine Environments of the Genus Thalassotalea.

Authors:  Minji Kim; In-Tae Cha; Ki-Eun Lee; Eun-Young Lee; Soo-Je Park
Journal:  Microorganisms       Date:  2020-09-14
  4 in total

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