Literature DB >> 28689656

Body Temperature Cycles Control Rhythmic Alternative Splicing in Mammals.

Marco Preußner1, Gesine Goldammer2, Alexander Neumann2, Tom Haltenhof2, Pia Rautenstrauch2, Michaela Müller-McNicoll3, Florian Heyd4.   

Abstract

The core body temperature of all mammals oscillates with the time of the day. However, direct molecular consequences of small, physiological changes in body temperature remain largely elusive. Here we show that body temperature cycles drive rhythmic SR protein phosphorylation to control an alternative splicing (AS) program. A temperature change of 1°C is sufficient to induce a concerted splicing switch in a large group of functionally related genes, rendering this splicing-based thermometer much more sensitive than previously described temperature-sensing mechanisms. AS of two exons in the 5' UTR of the TATA-box binding protein (Tbp) highlights the general impact of this mechanism, as it results in rhythmic TBP protein levels with implications for global gene expression in vivo. Together our data establish body temperature-driven AS as a core clock-independent oscillator in mammalian peripheral clocks.
Copyright © 2017 Elsevier Inc. All rights reserved.

Entities:  

Keywords:  SR proteins; Tbp; U2af; alternative splicing; body temperature; circadian clock; molecular thermometer; phosphorylation; splicing network

Mesh:

Substances:

Year:  2017        PMID: 28689656     DOI: 10.1016/j.molcel.2017.06.006

Source DB:  PubMed          Journal:  Mol Cell        ISSN: 1097-2765            Impact factor:   17.970


  41 in total

1.  Alternative splicing: A thermometer controlling gene expression.

Authors:  Linda Koch
Journal:  Nat Rev Genet       Date:  2017-07-24       Impact factor: 53.242

2.  Characterization of cis-acting elements that control oscillating alternative splicing.

Authors:  Gesine Goldammer; Alexander Neumann; Miriam Strauch; Michaela Müller-McNicoll; Florian Heyd; Marco Preußner
Journal:  RNA Biol       Date:  2018-09-10       Impact factor: 4.652

3.  The heat's on: nuclear stress bodies signal intron retention.

Authors:  Sylvia Erhardt; Georg Stoecklin
Journal:  EMBO J       Date:  2020-01-09       Impact factor: 11.598

Review 4.  Communicating clocks shape circadian homeostasis.

Authors:  Kevin B Koronowski; Paolo Sassone-Corsi
Journal:  Science       Date:  2021-02-12       Impact factor: 47.728

5.  Differential Interleukin-2 Transcription Kinetics Render Mouse but Not Human T Cells Vulnerable to Splicing Inhibition Early after Activation.

Authors:  Debojit Bose; Alexander Neumann; Bernd Timmermann; Stefan Meinke; Florian Heyd
Journal:  Mol Cell Biol       Date:  2019-07-29       Impact factor: 4.272

Review 6.  How RNA structure dictates the usage of a critical exon of spinal muscular atrophy gene.

Authors:  Natalia N Singh; Ravindra N Singh
Journal:  Biochim Biophys Acta Gene Regul Mech       Date:  2019-07-16       Impact factor: 4.490

7.  Rapid and Dynamic Alternative Splicing Impacts the Arabidopsis Cold Response Transcriptome.

Authors:  Cristiane P G Calixto; Wenbin Guo; Allan B James; Nikoleta A Tzioutziou; Juan Carlos Entizne; Paige E Panter; Heather Knight; Hugh G Nimmo; Runxuan Zhang; John W S Brown
Journal:  Plant Cell       Date:  2018-05-15       Impact factor: 11.277

8.  LncRNA-dependent nuclear stress bodies promote intron retention through SR protein phosphorylation.

Authors:  Kensuke Ninomiya; Shungo Adachi; Tohru Natsume; Junichi Iwakiri; Goro Terai; Kiyoshi Asai; Tetsuro Hirose
Journal:  EMBO J       Date:  2019-11-29       Impact factor: 11.598

9.  The zinc finger domains in U2AF26 and U2AF35 have diverse functionalities including a role in controlling translation.

Authors:  Olga Herdt; Stefan Reich; Jan Medenbach; Bernd Timmermann; Didrik Olofsson; Marco Preußner; Florian Heyd
Journal:  RNA Biol       Date:  2020-03-01       Impact factor: 4.652

Review 10.  Alternative-splicing defects in cancer: Splicing regulators and their downstream targets, guiding the way to novel cancer therapeutics.

Authors:  Laura M Urbanski; Nathan Leclair; Olga Anczuków
Journal:  Wiley Interdiscip Rev RNA       Date:  2018-04-25       Impact factor: 9.957

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