Literature DB >> 28689146

Chemical modulators for epigenome reader domains as emerging epigenetic therapies for cancer and inflammation.

Nilesh Zaware1, Ming-Ming Zhou2.   

Abstract

Site-specific lysine acetylation and methylation on histones are critical post-translational modifications (PTMs) that govern ordered gene transcription in chromatin. Mis-regulation of these histone PTM-mediated processes has been shown to be associated with human diseases. Since the 2010 landmark reports of small molecules (+)-JQ1 and I-BET762 that target the acetyl-lysine 'reader' Bromodomain and Extra Terminal domain (BET) proteins, there have been relentless efforts to develop epigenetic therapy with small molecules to modulate molecular interactions of epigenome reader domain proteins with PTMs. In addition to BET, the other emerging targets include non-BET acetyl-lysine and methyl-lysine reader domains. This review covers the key chemical modulators of the aforementioned epigenome reader proteins.
Copyright © 2017 Elsevier Ltd. All rights reserved.

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Year:  2017        PMID: 28689146      PMCID: PMC5581715          DOI: 10.1016/j.cbpa.2017.06.012

Source DB:  PubMed          Journal:  Curr Opin Chem Biol        ISSN: 1367-5931            Impact factor:   8.822


  61 in total

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Review 2.  Rubinstein-Taybi syndrome.

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Review 3.  Chromatin modifications and their function.

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Journal:  Cell       Date:  2007-02-23       Impact factor: 41.582

Review 4.  How chromatin-binding modules interpret histone modifications: lessons from professional pocket pickers.

Authors:  Sean D Taverna; Haitao Li; Alexander J Ruthenburg; C David Allis; Dinshaw J Patel
Journal:  Nat Struct Mol Biol       Date:  2007-11-05       Impact factor: 15.369

5.  Structure and ligand of a histone acetyltransferase bromodomain.

Authors:  C Dhalluin; J E Carlson; L Zeng; C He; A K Aggarwal; M M Zhou
Journal:  Nature       Date:  1999-06-03       Impact factor: 49.962

6.  Target structure-based discovery of small molecules that block human p53 and CREB binding protein association.

Authors:  Lois Resnick-Silverman; Sherry Yan; Shiraz Mutjaba; Wen-Jun Liu; Lei Zeng; James J Manfredi; Ming-Ming Zhou
Journal:  Chem Biol       Date:  2006-01

7.  Structural basis of lysine-acetylated HIV-1 Tat recognition by PCAF bromodomain.

Authors:  Shiraz Mujtaba; Yan He; Lei Zeng; Amjad Farooq; Justin E Carlson; Melanie Ott; Eric Verdin; Ming-Ming Zhou
Journal:  Mol Cell       Date:  2002-03       Impact factor: 17.970

8.  The Tudor domain 'Royal Family': Tudor, plant Agenet, Chromo, PWWP and MBT domains.

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Review 9.  Viral mechanisms involved in the transcriptional CBP/p300 regulation of inflammatory and immune responses.

Authors:  Yolanda Revilla; Aitor G Granja
Journal:  Crit Rev Immunol       Date:  2009       Impact factor: 2.214

10.  Role of the polycomb protein EED in the propagation of repressive histone marks.

Authors:  Raphael Margueron; Neil Justin; Katsuhito Ohno; Miriam L Sharpe; Jinsook Son; William J Drury; Philipp Voigt; Stephen R Martin; William R Taylor; Valeria De Marco; Vincenzo Pirrotta; Danny Reinberg; Steven J Gamblin
Journal:  Nature       Date:  2009-09-20       Impact factor: 49.962

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  14 in total

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3.  Domain-selective BET inhibition attenuates transcriptional and behavioral responses to cocaine.

Authors:  Mandakini B Singh; Christopher J Babigian; Gregory C Sartor
Journal:  Neuropharmacology       Date:  2022-03-18       Impact factor: 5.250

4.  An in silico pipeline for the discovery of multitarget ligands: A case study for epi-polypharmacology based on DNMT1/HDAC2 inhibition.

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5.  In silico design and molecular basis for the selectivity of Olinone toward the first over the second bromodomain of BRD4.

Authors:  Yoel Rodríguez; Guillermo Gerona-Navarro; Roman Osman; Ming-Ming Zhou
Journal:  Proteins       Date:  2019-10-21

Review 6.  On top of biosynthetic gene clusters: How epigenetic machinery influences secondary metabolism in fungi.

Authors:  Brandon T Pfannenstiel; Nancy P Keller
Journal:  Biotechnol Adv       Date:  2019-02-07       Impact factor: 14.227

7.  The dCypher Approach to Interrogate Chromatin Reader Activity Against Posttranslational Modification-Defined Histone Peptides and Nucleosomes.

Authors:  Matthew R Marunde; Irina K Popova; Ellen N Weinzapfel; Michael-C Keogh
Journal:  Methods Mol Biol       Date:  2022

Review 8.  Improved methods for targeting epigenetic reader domains of acetylated and methylated lysine.

Authors:  Isabelle A Engelberg; Caroline A Foley; Lindsey I James; Stephen V Frye
Journal:  Curr Opin Chem Biol       Date:  2021-04-11       Impact factor: 8.972

Review 9.  The Impact of obesity and diabetes mellitus on pancreatic cancer: Molecular mechanisms and clinical perspectives.

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10.  Chromatin Regulation by HP1γ Contributes to Survival of 5-Azacytidine-Resistant Cells.

Authors:  Satoshi Imanishi; Tomohiro Umezu; Chiaki Kobayashi; Tomohiko Ohta; Kazuma Ohyashiki; Junko H Ohyashiki
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