Literature DB >> 28683309

The Complete Structure of the Mycobacterium smegmatis 70S Ribosome.

Jendrik Hentschel1, Chloe Burnside1, Ingrid Mignot1, Marc Leibundgut1, Daniel Boehringer1, Nenad Ban2.   

Abstract

The ribosome carries out the synthesis of proteins in every living cell. It consequently represents a frontline target in anti-microbial therapy. Tuberculosis ranks among the leading causes of death worldwide, due in large part to the combination of difficult-to-treat latency and antibiotic resistance. Here, we present the 3.3-Å cryo-EM structure of the 70S ribosome of Mycobacterium smegmatis, a close relative to the human pathogen Mycobacterium tuberculosis. The structure reveals two additional ribosomal proteins and localizes them to the vicinity of drug-target sites in both the catalytic center and the decoding site of the ribosome. Furthermore, we visualized actinobacterium-specific rRNA and protein expansions that extensively remodel the ribosomal surface with implications for polysome organization. Our results provide a foundation for understanding the idiosyncrasies of mycobacterial translation and reveal atomic details of the structure that will facilitate the design of anti-tubercular therapeutics.
Copyright © 2017 The Author(s). Published by Elsevier Inc. All rights reserved.

Entities:  

Keywords:  Actinobacterium; Mycobacterium; antibiotic; cryo-EM; polysome; ribosome; translation

Mesh:

Substances:

Year:  2017        PMID: 28683309     DOI: 10.1016/j.celrep.2017.06.029

Source DB:  PubMed          Journal:  Cell Rep            Impact factor:   9.423


  31 in total

1.  Differences in the path to exit the ribosome across the three domains of life.

Authors:  Khanh Dao Duc; Sanjit S Batra; Nicholas Bhattacharya; Jamie H D Cate; Yun S Song
Journal:  Nucleic Acids Res       Date:  2019-05-07       Impact factor: 16.971

2.  Revising the Structural Diversity of Ribosomal Proteins Across the Three Domains of Life.

Authors:  Sergey Melnikov; Kasidet Manakongtreecheep; Dieter Söll
Journal:  Mol Biol Evol       Date:  2018-07-01       Impact factor: 16.240

3.  Whole Ribosome NMR: Dipolar Couplings and Contributions to Whole Cells.

Authors:  Rie Nygaard; Joseph A H Romaniuk; David M Rice; Lynette Cegelski
Journal:  J Phys Chem B       Date:  2017-09-29       Impact factor: 2.991

4.  Identification of Mycobacterial Ribosomal Proteins as Targets for CD4+ T Cells That Enhance Protective Immunity in Tuberculosis.

Authors:  Steven C Kennedy; Alison J Johnson; Sushma Bharrhan; Cecilia S Lindestam Arlehamn; Jiayong Xu; Scott J Garforth; John Chan; William R Jacobs; Alessandro Sette; Steven C Almo; Steven A Porcelli
Journal:  Infect Immun       Date:  2018-08-22       Impact factor: 3.441

5.  Development of Assay Systems for Amber Codon Decoding at the Steps of Initiation and Elongation in Mycobacteria.

Authors:  Ashwin Govindan; Sandeep Miryala; Sanjay Mondal; Umesh Varshney
Journal:  J Bacteriol       Date:  2018-10-23       Impact factor: 3.490

6.  Small Proteins; Big Questions.

Authors:  Todd Gray; Gisela Storz; Kai Papenfort
Journal:  J Bacteriol       Date:  2021-07-26       Impact factor: 3.476

7.  Cryo-EM structure of Mycobacterium smegmatis ribosome reveals two unidentified ribosomal proteins close to the functional centers.

Authors:  Zhifei Li; Xueliang Ge; Yixiao Zhang; Lvqin Zheng; Suparna Sanyal; Ning Gao
Journal:  Protein Cell       Date:  2018-04       Impact factor: 14.870

8.  Alternative ribosomal proteins are required for growth and morphogenesis of Mycobacterium smegmatis under zinc limiting conditions.

Authors:  Allexa Dow; Sladjana Prisic
Journal:  PLoS One       Date:  2018-04-23       Impact factor: 3.240

9.  Structural insights into species-specific features of the ribosome from the human pathogen Mycobacterium tuberculosis.

Authors:  Kailu Yang; Jeng-Yih Chang; Zhicheng Cui; Xiaojun Li; Ran Meng; Lijun Duan; Jirapat Thongchol; Joanita Jakana; Christoph M Huwe; James C Sacchettini; Junjie Zhang
Journal:  Nucleic Acids Res       Date:  2017-10-13       Impact factor: 16.971

10.  Zinc depletion induces ribosome hibernation in mycobacteria.

Authors:  Yunlong Li; Manjuli R Sharma; Ravi K Koripella; Yong Yang; Prem S Kaushal; Qishan Lin; Joseph T Wade; Todd A Gray; Keith M Derbyshire; Rajendra K Agrawal; Anil K Ojha
Journal:  Proc Natl Acad Sci U S A       Date:  2018-07-23       Impact factor: 11.205

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