Literature DB >> 28675555

RNA sequencing in post-mortem human brains of neuropsychiatric disorders.

Chun Wu1, Raphael M Bendriem2, Susanna P Garamszegi3, Lei Song1, Chun-Ting Lee3.   

Abstract

RNA sequencing (RNA-Seq), a revolutionary tool for transcriptome profiling, is becoming increasingly important for neuroscientists in studying the transcriptional landscape of the human brain. Studies using this next-generation sequencing technique have already revealed novel insights into the complexity of neurons in the human brain and pathogenesis of complex neurological diseases. In clinical neuroscience, RNA-Seq provides exciting opportunities for improving diagnosis and treatment of neurological diseases by facilitating the development of pharmacotherapies able to modulate gene expression. Furthermore, integrative whole genome sequencing and transcriptome sequencing can provide additional information for the functional role of mutated genes, prioritization of variants, and intron/exon splicing. This review describes the current state of RNA-Seq studies in neuropsychiatric disorders using post-mortem human brains, a brief survey of best practices for experimental design and sequencing data analysis, and the challenges associated with its application in the human brain.
© 2017 The Authors. Psychiatry and Clinical Neurosciences © 2017 Japanese Society of Psychiatry and Neurology.

Entities:  

Keywords:  RNA sequencing; human post-mortem brain; neuropsychiatric disorders; pathway analysis; transcriptome

Mesh:

Year:  2017        PMID: 28675555     DOI: 10.1111/pcn.12550

Source DB:  PubMed          Journal:  Psychiatry Clin Neurosci        ISSN: 1323-1316            Impact factor:   5.188


  7 in total

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Authors:  Gea Koks; Abigail L Pfaff; Vivien J Bubb; John P Quinn; Sulev Koks
Journal:  Exp Biol Med (Maywood)       Date:  2020-09-11

3.  Making a family decision to donate the brain for genomic research: lessons from the genotype-tissue expression project (GTEx).

Authors:  Laura A Siminoff; Deborah Mash; Maureen Wilson-Genderson; Heather M Gardiner; Maghboeba Mosavel; Laura Barker
Journal:  Cell Tissue Bank       Date:  2021-01-02       Impact factor: 1.752

4.  Tissue- and Species-Specific Patterns of RNA metabolism in Post-Mortem Mammalian Retina and Retinal Pigment Epithelium.

Authors:  Les Kallestad; Seth Blackshaw; Ahmad M Khalil; Krzysztof Palczewski
Journal:  Sci Rep       Date:  2019-10-15       Impact factor: 4.379

Review 5.  Intestinal Microbiota and Liver Diseases: Insights into Therapeutic Use of Traditional Chinese Medicine.

Authors:  Tingshuai Wang; Shaodong Huang; Cong Wu; Na Wang; Rongzhen Zhang; Minggang Wang; Dewen Mao
Journal:  Evid Based Complement Alternat Med       Date:  2021-04-22       Impact factor: 2.629

6.  RNA sequencing of whole blood in dogs with primary immune-mediated hemolytic anemia (IMHA) reveals novel insights into disease pathogenesis.

Authors:  Corie Borchert; Adam Herman; Megan Roth; Aimee C Brooks; Steven G Friedenberg
Journal:  PLoS One       Date:  2020-10-22       Impact factor: 3.240

Review 7.  Cortical Cartography: Mapping Arealization Using Single-Cell Omics Technology.

Authors:  Patricia R Nano; Claudia V Nguyen; Jessenya Mil; Aparna Bhaduri
Journal:  Front Neural Circuits       Date:  2021-12-10       Impact factor: 3.492

  7 in total

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