Literature DB >> 28675450

Synthetic essentiality: Targeting tumor suppressor deficiencies in cancer.

Di Zhao1, Ronald A DePinho1.   

Abstract

In this review, we summarize recent work exploring a novel conceptual approach termed "synthetic essentiality" as a means for targeting specific tumor suppressor gene deficiencies in cancer. With the aid of extensive publically available cancer genome and clinical databases, "synthetic essentiality" could be utilized to identify synthetic essential genes, which might be occasionally deleted in some cancers but almost always retained in the context of a specific tumor suppressor deficiency. Synthetic essentiality expands the existing concepts for therapeutic strategies, including oncogene addiction, tumor maintenance, synthetic, and collateral lethality, to provide a framework for the discovery of cancer-specific vulnerabilities. Enabled by ever-expanding large-scale genome datasets and genome-scale functional screens, the "synthetic essentiality" framework provides an avenue for the identification of context-specific therapeutic targets and development of patient responder hypotheses for novel and existing therapies.
© 2017 WILEY Periodicals, Inc.

Entities:  

Keywords:  cancer genome; cancer therapy; cancer-specific vulnerabilities; synthetic essentiality; synthetic lethality; tumor suppressor deficiency

Mesh:

Year:  2017        PMID: 28675450     DOI: 10.1002/bies.201700076

Source DB:  PubMed          Journal:  Bioessays        ISSN: 0265-9247            Impact factor:   4.345


  11 in total

Review 1.  Prostate cancer research: The next generation; report from the 2019 Coffey-Holden Prostate Cancer Academy Meeting.

Authors:  Andrea K Miyahira; Adam Sharp; Leigh Ellis; Jennifer Jones; Salma Kaochar; H Benjamin Larman; David A Quigley; Huihui Ye; Jonathan W Simons; Kenneth J Pienta; Howard R Soule
Journal:  Prostate       Date:  2019-12-11       Impact factor: 4.104

2.  Chromatin Regulator CHD1 Remodels the Immunosuppressive Tumor Microenvironment in PTEN-Deficient Prostate Cancer.

Authors:  Di Zhao; Li Cai; Xin Lu; Xin Liang; Jiexi Li; Peiwen Chen; Michael Ittmann; Xiaoying Shang; Shan Jiang; Haoyan Li; Chenling Meng; Ivonne Flores; Jian H Song; James W Horner; Zhengdao Lan; Chang-Jiun Wu; Jun Li; Qing Chang; Ko-Chien Chen; Guocan Wang; Pingna Deng; Denise J Spring; Y Alan Wang; Ronald A DePinho
Journal:  Cancer Discov       Date:  2020-05-08       Impact factor: 39.397

3.  Synthetic Essentiality of Tryptophan 2,3-Dioxygenase 2 in APC-Mutated Colorectal Cancer.

Authors:  Rumi Lee; Jiexi Li; Jun Li; Chang-Jiun Wu; Shan Jiang; Wen-Hao Hsu; Deepavali Chakravarti; Peiwen Chen; Kyle A LaBella; Jing Li; Denise J Spring; Di Zhao; Y Alan Wang; Ronald A DePinho
Journal:  Cancer Discov       Date:  2022-07-06       Impact factor: 38.272

4.  Predicting and characterizing a cancer dependency map of tumors with deep learning.

Authors:  Yu-Chiao Chiu; Siyuan Zheng; Li-Ju Wang; Brian S Iskra; Manjeet K Rao; Peter J Houghton; Yufei Huang; Yidong Chen
Journal:  Sci Adv       Date:  2021-08-20       Impact factor: 14.136

Review 5.  Context-Dependent Glioblastoma-Macrophage/Microglia Symbiosis and Associated Mechanisms.

Authors:  Wenjing Xuan; Maciej S Lesniak; Charles David James; Amy B Heimberger; Peiwen Chen
Journal:  Trends Immunol       Date:  2021-03-01       Impact factor: 16.687

6.  Functional genomics identifies specific vulnerabilities in PTEN-deficient breast cancer.

Authors:  Yew Chung Tang; Szu-Chi Ho; Elisabeth Tan; Alvin Wei Tian Ng; John R McPherson; Germaine Yen Lin Goh; Bin Tean Teh; Frederic Bard; Steven G Rozen
Journal:  Breast Cancer Res       Date:  2018-03-22       Impact factor: 6.466

Review 7.  Cutting down the time to identify challenging tumor therapeutic targets and drug combinations using synthetic lethal approaches.

Authors:  John S Lazo
Journal:  F1000Res       Date:  2018-03-12

8.  Identification of the PTEN-ARID4B-PI3K pathway reveals the dependency on ARID4B by PTEN-deficient prostate cancer.

Authors:  Ray-Chang Wu; In-Chi Young; Yu-Fang Chen; Sung-Ting Chuang; Antoun Toubaji; Mei-Yi Wu
Journal:  Nat Commun       Date:  2019-09-24       Impact factor: 14.919

9.  COL6A6 interacted with P4HA3 to suppress the growth and metastasis of pituitary adenoma via blocking PI3K-Akt pathway.

Authors:  Ruiqing Long; Zhuohui Liu; Jinghui Li; Hualin Yu
Journal:  Aging (Albany NY)       Date:  2019-10-17       Impact factor: 5.682

10.  Chemopreventive targeted treatment of head and neck precancer by Wee1 inhibition.

Authors:  Anne M van Harten; D Vicky de Boer; Sanne R Martens-de Kemp; Marijke Buijze; Sonja H Ganzevles; Keith D Hunter; C René Leemans; Victor W van Beusechem; Rob M F Wolthuis; Renée X de Menezes; Ruud H Brakenhoff
Journal:  Sci Rep       Date:  2020-02-11       Impact factor: 4.379

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