Literature DB >> 28671667

Mechanochemical evolution of the giant muscle protein titin as inferred from resurrected proteins.

Aitor Manteca1, Jörg Schönfelder1, Alvaro Alonso-Caballero1, Marie J Fertin1, Nerea Barruetabeña1, Bruna F Faria2, Elias Herrero-Galán3, Jorge Alegre-Cebollada3, David De Sancho1,4, Raul Perez-Jimenez1,4,5.   

Abstract

The sarcomere-based structure of muscles is conserved among vertebrates; however, vertebrate muscle physiology is extremely diverse. A molecular explanation for this diversity and its evolution has not been proposed. We use phylogenetic analyses and single-molecule force spectroscopy (smFS) to investigate the mechanochemical evolution of titin, a giant protein responsible for the elasticity of muscle filaments. We resurrect eight-domain fragments of titin corresponding to the common ancestors to mammals, sauropsids, and tetrapods, which lived 105-356 Myr ago, and compare them with titin fragments from some of their modern descendants. We demonstrate that the resurrected titin molecules are rich in disulfide bonds and display high mechanical stability. These mechanochemical elements have changed over time, creating a paleomechanical trend that seems to correlate with animal body size, allowing us to estimate the sizes of extinct species. We hypothesize that mechanical adjustments in titin contributed to physiological changes that allowed the muscular development and diversity of modern tetrapods.

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Year:  2017        PMID: 28671667     DOI: 10.1038/nsmb.3426

Source DB:  PubMed          Journal:  Nat Struct Mol Biol        ISSN: 1545-9985            Impact factor:   15.369


  43 in total

1.  Contour length and refolding rate of a small protein controlled by engineered disulfide bonds.

Authors:  Sri Rama Koti Ainavarapu; Jasna Brujic; Hector H Huang; Arun P Wiita; Hui Lu; Lewyn Li; Kirstin A Walther; Mariano Carrion-Vazquez; Hongbin Li; Julio M Fernandez
Journal:  Biophys J       Date:  2006-10-06       Impact factor: 4.033

2.  PAML 4: phylogenetic analysis by maximum likelihood.

Authors:  Ziheng Yang
Journal:  Mol Biol Evol       Date:  2007-05-04       Impact factor: 16.240

3.  A regular pattern of Ig super-motifs defines segmental flexibility as the elastic mechanism of the titin chain.

Authors:  Eleonore von Castelmur; Marco Marino; Dmitri I Svergun; Laurent Kreplak; Zöhre Ucurum-Fotiadis; Petr V Konarev; Alexandre Urzhumtsev; Dietmar Labeit; Siegfried Labeit; Olga Mayans
Journal:  Proc Natl Acad Sci U S A       Date:  2008-01-22       Impact factor: 11.205

4.  S-glutathionylation of cryptic cysteines enhances titin elasticity by blocking protein folding.

Authors:  Jorge Alegre-Cebollada; Pallav Kosuri; David Giganti; Edward Eckels; Jaime Andrés Rivas-Pardo; Nazha Hamdani; Chad M Warren; R John Solaro; Wolfgang A Linke; Julio M Fernández
Journal:  Cell       Date:  2014-03-13       Impact factor: 41.582

5.  Palaeohistological Evidence for Ancestral High Metabolic Rate in Archosaurs.

Authors:  Lucas J Legendre; Guillaume Guénard; Jennifer Botha-Brink; Jorge Cubo
Journal:  Syst Biol       Date:  2016-04-12       Impact factor: 15.683

6.  Work Done by Titin Protein Folding Assists Muscle Contraction.

Authors:  Jaime Andrés Rivas-Pardo; Edward C Eckels; Ionel Popa; Pallav Kosuri; Wolfgang A Linke; Julio M Fernández
Journal:  Cell Rep       Date:  2016-02-04       Impact factor: 9.423

7.  Detection of reversible protein thiol modifications in tissues.

Authors:  Lynette K Rogers; Barbara L Leinweber; Charles V Smith
Journal:  Anal Biochem       Date:  2006-09-05       Impact factor: 3.365

8.  Single-molecule paleoenzymology probes the chemistry of resurrected enzymes.

Authors:  Raul Perez-Jimenez; Alvaro Inglés-Prieto; Zi-Ming Zhao; Inmaculada Sanchez-Romero; Jorge Alegre-Cebollada; Pallav Kosuri; Sergi Garcia-Manyes; T Joseph Kappock; Masaru Tanokura; Arne Holmgren; Jose M Sanchez-Ruiz; Eric A Gaucher; Julio M Fernandez
Journal:  Nat Struct Mol Biol       Date:  2011-04-03       Impact factor: 15.369

9.  An experimental phylogeny to benchmark ancestral sequence reconstruction.

Authors:  Ryan N Randall; Caelan E Radford; Kelsey A Roof; Divya K Natarajan; Eric A Gaucher
Journal:  Nat Commun       Date:  2016-09-15       Impact factor: 14.919

10.  Enhancing the pharmaceutical properties of protein drugs by ancestral sequence reconstruction.

Authors:  Philip M Zakas; Harrison C Brown; Kristopher Knight; Shannon L Meeks; H Trent Spencer; Eric A Gaucher; Christopher B Doering
Journal:  Nat Biotechnol       Date:  2016-09-26       Impact factor: 54.908

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  5 in total

Review 1.  Redox regulation of protein nanomechanics in health and disease: Lessons from titin.

Authors:  Elías Herrero-Galán; Inés Martínez-Martín; Jorge Alegre-Cebollada
Journal:  Redox Biol       Date:  2018-12-12       Impact factor: 11.799

2.  Structural diversity in the atomic resolution 3D fingerprint of the titin M-band segment.

Authors:  Spyros D Chatziefthimiou; Philipp Hornburg; Florian Sauer; Simone Mueller; Deniz Ugurlar; Emma-Ruoqi Xu; Matthias Wilmanns
Journal:  PLoS One       Date:  2019-12-19       Impact factor: 3.240

3.  Ancestral Sequence Reconstruction: From Chemical Paleogenetics to Maximum Likelihood Algorithms and Beyond.

Authors:  Avery G A Selberg; Eric A Gaucher; David A Liberles
Journal:  J Mol Evol       Date:  2021-01-24       Impact factor: 2.395

4.  Disulfide isomerization reactions in titin immunoglobulin domains enable a mode of protein elasticity.

Authors:  David Giganti; Kevin Yan; Carmen L Badilla; Julio M Fernandez; Jorge Alegre-Cebollada
Journal:  Nat Commun       Date:  2018-01-12       Impact factor: 14.919

5.  Highly thermostable carboxylic acid reductases generated by ancestral sequence reconstruction.

Authors:  Adam Thomas; Rhys Cutlan; William Finnigan; Mark van der Giezen; Nicholas Harmer
Journal:  Commun Biol       Date:  2019-11-22
  5 in total

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