| Literature DB >> 28654266 |
Cécile Roche1, Qianfu Luo1, Guzmán Gil-Ramírez1, Hua-Wei Jiang1, Daniel R Kohn1, Yaoyao Xiong1, Amber L Thompson1, Harry L Anderson1.
Abstract
Strapped or "basket-handle"Entities:
Year: 2017 PMID: 28654266 PMCID: PMC5600440 DOI: 10.1021/acs.joc.7b01128
Source DB: PubMed Journal: J Org Chem ISSN: 0022-3263 Impact factor: 4.354
Figure 1Target six-porphyrin nanoring functionalized with strapped sulfur anchors on two diametrically opposed porphyrins: (a) chemical structure of the target ring; (b) calculated structure (MOPAC); (c) ring anchored to gold electrodes in a molecular junction. 3,5-Di-tert-butylphenyl side groups and hydrogen atoms omitted for clarity. Color code: C, gray; N, light blue; O, red; S, yellow; Zn, purple; T6 template, dark blue; strap, green.
Scheme 1Synthesis of Strapped Porphyrins 5a–e
Yields of Porphyrin Synthesis: Influence of Concentration and Strap
| compound | yield at
3.5 mM | yield at
0.35 mM |
|---|---|---|
| 1% | 6% | |
| 5% | 20% | |
| 8% | 31% | |
| 0% | <1% | |
| 1% | 6% |
Concentration of starting material 3a–e for the porphyrin condensation. Conditions: (i) dialdehyde 3a–e (3.5 mM or 0.35 mM, 1 equiv), dipyrromethane 4 (2 equiv), TFA (2 equiv), DCM, 20 °C, 16 h; (ii) DDQ (3 equiv), 20 °C, 30 min; (iii) NEt3 (2 equiv).
Figure 21H NMR spectra of strapped porphyrins 5a–c in CDCl3 (400 MHz, 298 K); the aromatics (top) and aliphatics (bottom) regions are displayed. The chemical shifts of protons a to e highlight the increasing ring current effect of the porphyrin on the strap protons as the strap gets shorter.
Scheme 2Synthesis of Six-Porphyrin Nanorings -P6·T6 Functionalized with Strapped Sulfur Anchors
Figure 31H NMR spectra of six-porphyrin nanorings -P6·T6 (CDCl3, 400 MHz, 298 K). Assignments (based on COSY and NOESY) are given for -P6·T6. Dotted lines highlight the appearance of a different product of reduced symmetry in the 1H NMR spectrum of -P6·T6. The low-symmetry species is the major product for -P6·T6.
Figure 4Region of 2D-ROESY spectrum (CDCl3, 500 MHz, 298 K) showing NOE correlations between strap and template for -P6·T6 (n = 10). NOE-correlated protons are indicated by arrows. Due to their asymmetric environment, the strap protons a–e are diastereotopic and give rise to split signals, for example protons a give two broad signals denoted a and a′ on the vertical 1H NMR trace.
Figure 5Partial chemical structures of the out- and in-isomers of the porphyrin nanorings -P6·T6, with the strap oriented respectively outside (a) or inside (b) the ring, between two template legs. The ratios of isomers determined by 1H NMR are indicated for the different strap lengths. Optimized geometries (MOPAC) of the favored binding mode with a short strap ((c),(e); n = 7) and with a long strap ((d),(f); n = 10).
Scheme 3Removal of the Template To Yield the Template-Free Nanoring -P6
SEC: size exclusion chromatography, BioBeads SX-1.
Figure 61H NMR spectra of 1:1 complexes of strapped dibromoporphyrins 7a–c with pyridine in CD2Cl2 at 193 K (500 MHz). Signals belonging to the out and in complexes are displayed in blue and red, respectively, with overlapping signals displayed in purple. In the in complex, the reduced symmetry of the molecule leads to splitting of the β pyrrole proton signals into 4 doublets (β1-st and β2-st refer to the β protons on the strap side), and restricted conformational freedom leads to splitting of the strap proton signals (noted for example a1 and a2 for the a protons).
Ratios of Out and In Isomers in 7a–c/Pyridine Complexes in CD2Cl2 Solution at 193 Ka
| complex | ||
|---|---|---|
| 77% | 23% | |
| 37% | 63% | |
| <5% | >95% |
Determined by 1H NMR, Figure .
Figure 7Solid-state structures of 1:1 complexes of pyridine with strapped porphyrin monomers 6a–c and 7a–c from single crystal X-ray diffraction studies. (a),(b) Short strap (n = 7); (c),(d) intermediate strap (n = 8); (e),(f) long strap (n = 10). The unit cell for 6a contains two porphyrin-pyridine complexes. Some disorder is present in the central part of the strap in the crystal structures of 6b and 7c; the minor component is omitted for clarity.