Literature DB >> 28651487

Identification of genes and pathways related to lymphovascular invasion in breast cancer patients: A bioinformatics analysis of gene expression profiles.

Sukhontip Klahan1, Henry Sung-Ching Wong1,2, Shih-Hsin Tu3,4, Wan-Hsuan Chou2, Yan-Feng Zhang5, Thien-Fiew Ho6, Chih-Yi Liu7, Shih-Ying Yih8, Hsing Fang Lu1, Sean Chun-Chang Chen9, Chi-Cheng Huang3,10,11, Wei-Chiao Chang1,2,12,13,14.   

Abstract

Surgery is the most effective treatment for breast cancer patients. However, some patients developed recurrence and distant metastasis after surgery. Adjuvant therapy is considered for high-risk patients depending on several prognostic markers, and lymphovascular invasion has become one of such prognostic markers that help physicians to identify the risk for distant metastasis and recurrence. However, the mechanism of lymphovascular invasion in breast cancer remains unknown. This study aims to unveil the genes and pathways that may involve in lymphovascular invasion in breast cancer. In total, 108 breast cancer samples were collected during surgery and microarray analysis was performed. Significance analysis of the microarrays and limma package for R were used to examine differentially expressed genes between lymphovascular invasion-positive and lymphovascular invasion-negative cases. Network and pathway analyses were mapped using the Ingenuity Pathway Analysis and the Database for Annotation, Visualization and Integrated Discovery. In total, 86 differentially expressed genes, including 37 downregulated genes and 49 upregulated genes were identified in lymphovascular invasion-positive patients. Among these genes, TNFSF11, IL6ST, and EPAS1 play important roles in cytokine-receptor interaction, which is the most enriched pathway related to lymphovascular invasion. Moreover, the results also suggested that an imbalance between extracellular matrix components and tumor micro-environment could induce lymphovascular invasion. Our study evaluated the underlying mechanisms of lymphovascular invasion, which may further help to assess the risk of breast cancer progression and identify potential targets of adjuvant treatment.

Entities:  

Keywords:  Breast cancer; bioinformatics analysis; cytokine interaction pathway; lymphovascular invasion; microarray analysis

Mesh:

Substances:

Year:  2017        PMID: 28651487     DOI: 10.1177/1010428317705573

Source DB:  PubMed          Journal:  Tumour Biol        ISSN: 1010-4283


  11 in total

1.  Lymphovascular invasion in breast cancer is associated with gene expression signatures of cell proliferation but not lymphangiogenesis or immune response.

Authors:  Mariko Asaoka; Santosh K Patnaik; Frank Zhang; Takashi Ishikawa; Kazuaki Takabe
Journal:  Breast Cancer Res Treat       Date:  2020-04-13       Impact factor: 4.872

2.  Lymphovascular invasion as a negative prognostic factor for triple-negative breast cancer after surgery.

Authors:  Ki Jung Ahn; Jisun Park; Yunseon Choi
Journal:  Radiat Oncol J       Date:  2017-12-15

3.  Identification of RAD54 homolog B as a promising therapeutic target for breast cancer.

Authors:  Jing Feng; Juanjuan Hu; Ying Xia
Journal:  Oncol Lett       Date:  2019-09-12       Impact factor: 2.967

4.  A key genomic subtype associated with lymphovascular invasion in invasive breast cancer.

Authors:  Sasagu Kurozumi; Chitra Joseph; Sultan Sonbul; Sami Alsaeed; Yousif Kariri; Abrar Aljohani; Sara Raafat; Mansour Alsaleem; Angela Ogden; Simon J Johnston; Mohammed A Aleskandarany; Takaaki Fujii; Ken Shirabe; Carlos Caldas; Ibraheem Ashankyty; Leslie Dalton; Ian O Ellis; Christine Desmedt; Andrew R Green; Nigel P Mongan; Emad A Rakha
Journal:  Br J Cancer       Date:  2019-05-22       Impact factor: 7.640

5.  Severe acute respiratory syndrome coronavirus (SARS-CoV)-2 infection induces dysregulation of immunity: in silico gene expression analysis.

Authors:  Yen-Hung Wu; I-Jeng Yeh; Nam Nhut Phan; Meng-Chi Yen; Hsin-Liang Liu; Chih-Yang Wang; Hui-Ping Hsu
Journal:  Int J Med Sci       Date:  2021-01-01       Impact factor: 3.738

6.  Lymphovascular invasion, race, and the 21-gene recurrence score in early estrogen receptor-positive breast cancer.

Authors:  Della Makower; Juan Lin; Xiaonan Xue; Joseph A Sparano
Journal:  NPJ Breast Cancer       Date:  2021-03-01

7.  Neoadjuvant palbociclib on ER+ breast cancer (N007): clinical response and EndoPredict's value.

Authors:  Louis W C Chow; Satoshi Morita; Christopher Y C Chow; Wai-Kuen Ng; Masakazu Toi
Journal:  Endocr Relat Cancer       Date:  2017-11-20       Impact factor: 5.678

8.  The Difference of Expression of 18 Genes in Axillary Invasion and Vascular Invasion Compared to Control Samples in Breast Cancer.

Authors:  Alireza Abdollahi; Sepideh Jahanian; Nima Hemmati; Hadis Mohammadpour
Journal:  Iran J Pathol       Date:  2019-08-01

9.  ANK2 Hypermethylation in Canine Mammary Tumors and Human Breast Cancer.

Authors:  Johannes J Schabort; A-Reum Nam; Kang-Hoon Lee; Seok Won Kim; Jeong Eon Lee; Je-Yoel Cho
Journal:  Int J Mol Sci       Date:  2020-11-18       Impact factor: 5.923

10.  Drug Repositioning and Subgroup Discovery for Precision Medicine Implementation in Triple Negative Breast Cancer.

Authors:  Zainab Al-Taie; Mark Hannink; Jonathan Mitchem; Christos Papageorgiou; Chi-Ren Shyu
Journal:  Cancers (Basel)       Date:  2021-12-14       Impact factor: 6.639

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