Literature DB >> 28638638

Crystal structure of 2,2'-(ethane-1,2-di-yl)bis-(2,3-di-hydro-1H-naphtho-[1,2-e][1,3]oxazine): a prospective raw material for polybenzoxazines.

Augusto Rivera1, Juan E Cepeda-Santamaría1, Jaime Ríos-Motta1, Michael Bolte2.   

Abstract

In the title compound, C26H24N2O2, the oxazine moiety is fused to a naphthalene ring system. The asymmetric unit consists of one half of the mol-ecule, which lies about an inversion centre. The C atoms of the ethyl-ene spacer group adopt an anti-periplanar arrangement. The oxazine ring adopts a half-chair conformation. In the crystal, supra-molecular chains running along the b axis are formed via short C-H⋯π contacts. The crystal studied was a non-merohedral twin with a fractional contribution of 0.168 (2) of the minor twin component.

Entities:  

Keywords:  benzoxazines; crystal structure; phenolic resins; short contacts

Year:  2017        PMID: 28638638      PMCID: PMC5458303          DOI: 10.1107/S2056989017006673

Source DB:  PubMed          Journal:  Acta Crystallogr E Crystallogr Commun


Chemical context

The oxazine moiety is well known as a building block for high-performance phenolic resins, which are of great inter­est in industry due to their superior mechanical and physical properties together with unusually high thermal resistance (Kiskan & Yagci, 2005 ▸). Recently, because of their high flexibility in mol­ecular design and performance-to-cost ratio, these monomers have gained attention for the preparation of cured thermosetting resins (Song et al., 2014 ▸; Yeganeh & Jangi, 2010 ▸). Benzoxazines and naphthoxazines, originally proposed by Holly & Cope (1944 ▸) and subsequently elaborated by Burke and co-workers (Burke et al., 1952 ▸), are obtained by Mannich-type condensation–cyclization reactions of phenols or naphthols with formaldehyde and primary amines in a 1:2:1 ratio (Deck et al., 2014 ▸). Inter­est in the synthesis of polybenzoxazines and polynaphthoxazines has greatly increased during the past few years as they have a great deal of mol­ecular design flexibility compared to ordinary phenolics (Yildirim et al., 2006 ▸). The title bis­napthoxazine, 2,2′-(ethane-1,2-di­yl)bis­(2,3-di­hydro-1H-naphtho­[1,2-e][1,3]oxazine), C26H24N2O2, was prepared by condensation of 2-naphthol with ethyl­enedi­amine and formaldehyde in a 2:1:4 molar ratio at room temperature for 15 min in methanol solution. Evaporation at room temperature afforded the title compound in 73% yield after recrystallization.

Structural commentary

In general terms, the structure of the title compound (Fig. 1 ▸) is similar to those of other naphthoxazine derivatives that have been reported in that the oxazine moiety adopts a half-chair conformation (Yang et al., 2007 ▸; Rivera et al., 2015 ▸), with puckering parameters Q = 0.478 (3) Å, θ = 51.5 (4)°, φ = 86.6 (4)°, and the ethyl­ene spacer group adopts an anti­periplanar arrangement as observed in 3,3′-(ethane-1,2-di­yl)bis­(3,4-di­hydro-2H-1,3-benzoxazine) (Rivera et al., 2012 ▸), with a N1—C13—C13i—N1i torsion angle of 180.0° [symmetry code: (i) 1 − x, 1 − y, 1 − z]. However, unlike the related structures, which crystallized in monoclinic space groups with one mol­ecule in the asymmetric unit (Yang et al., 2007 ▸; Rivera et al., 2012 ▸, 2015 ▸), the title compound (I) crystallizes with just half a mol­ecule in the asymmetric unit in the space group P21/c, utilizing the crystallographic inversion centre in the mol­ecular symmetry. The other half of the mol­ecule is generated by the symmetry operation (1 − x, 1 − y, 1 − z).
Figure 1

The mol­ecular structure of the title compound, with displacement ellipsoids drawn at the 50% probability level. Atoms labelled with the suffix A are generated using the symmetry operator (1 − x, 1 − y, 1 − z).

The aromatic CC bonds of naphthalene ring system have a narrow range of distances [from 1.365 (5) to 1.431 (4) Å]. The central C5—C10 bond at 1.415 (4) Å is, however, shorter by 0.014 Å than those in related structures (Yang et al., 2007 ▸; Rivera et al., 2015 ▸). The N1—C1 and O1—C1 bond lengths are normal and comparable to the corresponding values observed in these related structures.

Supra­molecular features

In the crystal, the packing of the title compound is dominated by short contacts (Table 1 ▸), as indicated by a PLATON (Spek, 2009 ▸) analysis. These contacts result from short C12—H12B⋯C2 and C12—H12B⋯C3 separations, which at 2.75 Å are both 0.15 Å shorter than the sum of the van der Waals radii, while the C—H⋯Cg1 contact to the mid-point of the C2–-C3 bond is even shorter at approximately 2.65 Å. These contacts are also much shorter than the C—H⋯Cg2 contact to the centroid of the C2–C4/C11/C12 ring (Fig. 2 ▸). The mol­ecules are by these short C—H⋯π contacts linked into chains propagating along the b-axis direction (Fig. 3 ▸).
Table 1

Selected short-contact geometry (Å, °)

Cg1 is the mid-point of the C2—C3 bond and Cg2 is the centroid of the C2–C4/C11/C12 ring.

C—H⋯CH⋯CC—H⋯C
C12—H12B⋯C2i 2.75169
C12—H12B⋯C3i 2.75142
C12–H12BCg12.654157
C12–H12BCg23.073155

Symmetry code: (i) x, −1 + y, z.

Figure 2

Possible C—H⋯π contacts, shown as dotted green lines, between mol­ecules of (I). Bond mid-points and ring centroids are shown as colored spheres.

Figure 3

Crystal packing of (I), showing C—H⋯(C,C) short contacts that result in chains propagating along the b-axis direction.

Database survey

The title compound is the first example of two naphtho-oxazine moieties linked by an ethyl­ene bridge.

Synthesis and crystallization

The title compound was prepared as described by Rivera et al. (2006 ▸). Crystals were obtained by slow evaporation of the reaction solution at ambient temperature and were isolated from the solution before complete evaporation of the solvent mixture.

Refinement details

Crystal data, data collection and structure refinement details are summarized in Table 2 ▸. All H atoms were located in the difference electron-density map. C-bound H atoms were fixed geometrically (C—H = 0.95 or 0.99 Å) and refined using a riding-model approximation, with U iso(H) set to 1.2U eq of the parent atom. The crystal was a non-merohedral twin with a fractional contribution of 0.168 (2) of the minor twin component.
Table 2

Experimental details

Crystal data
Chemical formulaC26H24N2O2
M r 396.47
Crystal system, space groupMonoclinic, P21/c
Temperature (K)173
a, b, c (Å)9.8658 (10), 5.0979 (4), 19.551 (2)
β (°)96.033 (8)
V3)977.87 (16)
Z 2
Radiation typeMo Kα
μ (mm−1)0.09
Crystal size (mm)0.27 × 0.11 × 0.04
 
Data collection
DiffractometerStoe IPDS II two-circle
Absorption correctionMulti-scan (X-AREA; Stoe & Cie, 2001)
T min, T max 0.443, 1.000
No. of measured, independent and observed [I > 2σ(I)] reflections9335, 9335, 5706
(sin θ/λ)max−1)0.625
 
Refinement
R[F 2 > 2σ(F 2)], wR(F 2), S 0.063, 0.130, 0.94
No. of reflections9335
No. of parameters137
H-atom treatmentH-atom parameters constrained
Δρmax, Δρmin (e Å−3)0.53, −0.34

Computer programs: X-AREA (Stoe & Cie, 2001 ▸), SHELXT (Sheldrick, 2015a ▸), XP in SHELXTL-Plus (Sheldrick, 2008 ▸), SHELXL2016 (Sheldrick, 2015b ▸) and publCIF (Westrip, 2010 ▸).

Crystal structure: contains datablock(s) I. DOI: 10.1107/S2056989017006673/sj5529sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S2056989017006673/sj5529Isup2.hkl Click here for additional data file. Supporting information file. DOI: 10.1107/S2056989017006673/sj5529Isup3.cml CCDC reference: 1547729 Additional supporting information: crystallographic information; 3D view; checkCIF report
C26H24N2O2F(000) = 420
Mr = 396.47Dx = 1.347 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
a = 9.8658 (10) ÅCell parameters from 9056 reflections
b = 5.0979 (4) Åθ = 2.8–26.4°
c = 19.551 (2) ŵ = 0.09 mm1
β = 96.033 (8)°T = 173 K
V = 977.87 (16) Å3Needle, colourless
Z = 20.27 × 0.11 × 0.04 mm
Stoe IPDS II two-circle diffractometer9335 independent reflections
Radiation source: Genix 3D IµS microfocus X-ray source5706 reflections with I > 2σ(I)
ω scansθmax = 26.4°, θmin = 2.8°
Absorption correction: multi-scan (X-AREA; Stoe & Cie, 2001)h = −12→12
Tmin = 0.443, Tmax = 1.000k = −6→6
9335 measured reflectionsl = −24→24
Refinement on F20 restraints
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.063H-atom parameters constrained
wR(F2) = 0.130w = 1/[σ2(Fo2) + (0.050P)2] where P = (Fo2 + 2Fc2)/3
S = 0.94(Δ/σ)max < 0.001
9335 reflectionsΔρmax = 0.53 e Å3
137 parametersΔρmin = −0.34 e Å3
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
Refinement. Refined as a 2-component twin
xyzUiso*/Ueq
N10.3328 (2)0.3467 (5)0.51587 (12)0.0291 (6)
O10.14340 (19)0.6404 (5)0.52587 (10)0.0346 (5)
C10.1935 (3)0.4104 (7)0.49256 (16)0.0351 (8)
H1A0.1350640.2585860.5011520.042*
H1B0.1855280.4409000.4422900.042*
C20.1675 (3)0.6281 (6)0.59661 (15)0.0302 (7)
C30.0926 (3)0.8089 (6)0.63272 (17)0.0350 (8)
H30.0299860.9255420.6082170.042*
C40.1107 (3)0.8150 (7)0.70288 (17)0.0370 (8)
H40.0619110.9392650.7269680.044*
C50.2015 (3)0.6382 (7)0.74028 (15)0.0319 (7)
C60.2182 (3)0.6366 (7)0.81341 (16)0.0397 (8)
H60.1692420.7591160.8379640.048*
C70.3039 (3)0.4611 (7)0.84895 (16)0.0419 (9)
H70.3135990.4601170.8978050.050*
C80.3771 (3)0.2834 (7)0.81263 (17)0.0421 (9)
H80.4368290.1624380.8374240.051*
C90.3648 (3)0.2792 (7)0.74225 (15)0.0355 (8)
H90.4157320.1559970.7189460.043*
C100.2761 (3)0.4585 (6)0.70373 (15)0.0295 (7)
C110.2593 (3)0.4567 (6)0.63016 (15)0.0276 (7)
C120.3413 (3)0.2746 (6)0.58900 (14)0.0288 (7)
H12A0.4379380.2785930.6086710.035*
H12B0.3075620.0929590.5930920.035*
C130.4289 (2)0.5552 (6)0.50126 (15)0.0290 (7)
H13A0.4309450.6914150.5374350.035*
H13B0.3976380.6384140.4566280.035*
U11U22U33U12U13U23
N10.0234 (11)0.0348 (16)0.0294 (13)−0.0034 (11)0.0031 (9)0.0008 (11)
O10.0264 (10)0.0434 (14)0.0335 (12)0.0053 (9)0.0002 (8)0.0001 (10)
C10.0240 (14)0.047 (2)0.0339 (16)−0.0011 (13)0.0013 (12)−0.0078 (15)
C20.0194 (13)0.0348 (18)0.0365 (17)−0.0036 (13)0.0034 (12)−0.0013 (14)
C30.0233 (13)0.035 (2)0.047 (2)0.0023 (13)0.0047 (13)−0.0013 (15)
C40.0284 (14)0.033 (2)0.051 (2)−0.0017 (13)0.0120 (14)−0.0119 (15)
C50.0270 (14)0.0336 (18)0.0358 (18)−0.0090 (13)0.0070 (12)−0.0041 (14)
C60.0412 (17)0.040 (2)0.0398 (19)−0.0157 (16)0.0151 (14)−0.0116 (16)
C70.0501 (19)0.048 (2)0.0286 (17)−0.0210 (17)0.0061 (14)0.0037 (15)
C80.0444 (17)0.043 (2)0.038 (2)−0.0089 (16)−0.0002 (15)0.0075 (16)
C90.0355 (15)0.034 (2)0.0377 (19)−0.0048 (14)0.0057 (13)0.0047 (15)
C100.0244 (13)0.0273 (17)0.0374 (17)−0.0071 (12)0.0067 (12)−0.0008 (13)
C110.0232 (12)0.0280 (17)0.0322 (16)−0.0049 (12)0.0058 (11)−0.0010 (13)
C120.0266 (13)0.0287 (17)0.0319 (16)0.0005 (12)0.0067 (12)0.0002 (13)
C130.0250 (13)0.0322 (18)0.0302 (15)0.0019 (12)0.0047 (12)0.0014 (14)
N1—C11.439 (3)C6—C71.369 (5)
N1—C131.472 (4)C6—H60.9500
N1—C121.470 (4)C7—C81.398 (5)
O1—C21.380 (4)C7—H70.9500
O1—C11.453 (4)C8—C91.369 (4)
C1—H1A0.9900C8—H80.9500
C1—H1B0.9900C9—C101.425 (4)
C2—C111.375 (4)C9—H90.9500
C2—C31.415 (4)C10—C111.431 (4)
C3—C41.365 (5)C11—C121.517 (4)
C3—H30.9500C12—H12A0.9900
C4—C51.418 (4)C12—H12B0.9900
C4—H40.9500C13—C13i1.518 (5)
C5—C101.415 (4)C13—H13A0.9900
C5—C61.422 (4)C13—H13B0.9900
C1—N1—C13112.9 (2)C6—C7—H7120.3
C1—N1—C12108.6 (2)C8—C7—H7120.3
C13—N1—C12113.4 (2)C9—C8—C7121.7 (3)
C2—O1—C1112.5 (2)C9—C8—H8119.2
N1—C1—O1113.5 (2)C7—C8—H8119.2
N1—C1—H1A108.9C8—C9—C10120.4 (3)
O1—C1—H1A108.9C8—C9—H9119.8
N1—C1—H1B108.9C10—C9—H9119.8
O1—C1—H1B108.9C5—C10—C9118.1 (3)
H1A—C1—H1B107.7C5—C10—C11120.0 (3)
C11—C2—O1122.9 (3)C9—C10—C11121.8 (3)
C11—C2—C3121.9 (3)C2—C11—C10118.5 (3)
O1—C2—C3115.2 (3)C2—C11—C12119.8 (3)
C4—C3—C2119.7 (3)C10—C11—C12121.7 (3)
C4—C3—H3120.1N1—C12—C11112.6 (2)
C2—C3—H3120.1N1—C12—H12A109.1
C3—C4—C5120.8 (3)C11—C12—H12A109.1
C3—C4—H4119.6N1—C12—H12B109.1
C5—C4—H4119.6C11—C12—H12B109.1
C10—C5—C4119.0 (3)H12A—C12—H12B107.8
C10—C5—C6119.5 (3)N1—C13—C13i110.8 (3)
C4—C5—C6121.5 (3)N1—C13—H13A109.5
C7—C6—C5120.9 (3)C13i—C13—H13A109.5
C7—C6—H6119.5N1—C13—H13B109.5
C5—C6—H6119.5C13i—C13—H13B109.5
C6—C7—C8119.4 (3)H13A—C13—H13B108.1
C13—N1—C1—O1−62.2 (3)C6—C5—C10—C11179.5 (3)
C12—N1—C1—O164.5 (3)C8—C9—C10—C5−0.3 (4)
C2—O1—C1—N1−50.6 (3)C8—C9—C10—C11−179.0 (3)
C1—O1—C2—C1116.5 (4)O1—C2—C11—C10−179.6 (3)
C1—O1—C2—C3−164.7 (2)C3—C2—C11—C101.6 (4)
C11—C2—C3—C4−0.2 (5)O1—C2—C11—C121.3 (4)
O1—C2—C3—C4−179.0 (3)C3—C2—C11—C12−177.5 (3)
C2—C3—C4—C5−1.5 (5)C5—C10—C11—C2−1.4 (4)
C3—C4—C5—C101.6 (4)C9—C10—C11—C2177.2 (3)
C3—C4—C5—C6−178.0 (3)C5—C10—C11—C12177.6 (3)
C10—C5—C6—C7−1.0 (5)C9—C10—C11—C12−3.7 (4)
C4—C5—C6—C7178.6 (3)C1—N1—C12—C11−43.2 (3)
C5—C6—C7—C80.8 (5)C13—N1—C12—C1183.2 (3)
C6—C7—C8—C9−0.3 (5)C2—C11—C12—N112.7 (4)
C7—C8—C9—C100.1 (5)C10—C11—C12—N1−166.3 (3)
C4—C5—C10—C9−178.8 (3)C1—N1—C13—C13i−156.7 (3)
C6—C5—C10—C90.8 (4)C12—N1—C13—C13i79.2 (4)
C4—C5—C10—C11−0.1 (4)
  5 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  3,3'-(Ethane-1,2-di-yl)bis-(3,4-dihydro-2H-1,3-benzoxazine).

Authors:  Augusto Rivera; Jairo Camacho; Jaime Ríos-Motta; Karla Fejfarová; Michal Dušek
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-12-17

3.  SHELXT - integrated space-group and crystal-structure determination.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A Found Adv       Date:  2015-01-01       Impact factor: 2.290

4.  Crystal structure refinement with SHELXL.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr C Struct Chem       Date:  2015-01-01       Impact factor: 1.172

5.  Structure validation in chemical crystallography.

Authors:  Anthony L Spek
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2009-01-20
  5 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.