Literature DB >> 28637279

High-dimensional multivariate mediation with application to neuroimaging data.

Oliver Y Chén1, Ciprian Crainiceanu1, Elizabeth L Ogburn1, Brian S Caffo1, Tor D Wager2, Martin A Lindquist3.   

Abstract

Mediation analysis is an important tool in the behavioral sciences for investigating the role of intermediate variables that lie in the path between a treatment and an outcome variable. The influence of the intermediate variable on the outcome is often explored using a linear structural equation model (LSEM), with model coefficients interpreted as possible effects. While there has been significant research on the topic, little work has been done when the intermediate variable (mediator) is a high-dimensional vector. In this work, we introduce a novel method for identifying potential mediators in this setting called the directions of mediation (DMs). DMs linearly combine potential mediators into a smaller number of orthogonal components, with components ranked based on the proportion of the LSEM likelihood each accounts for. This method is well suited for cases when many potential mediators are measured. Examples of high-dimensional potential mediators are brain images composed of hundreds of thousands of voxels, genetic variation measured at millions of single nucleotide polymorphisms (SNPs), or vectors of thousands of variables in large-scale epidemiological studies. We demonstrate the method using a functional magnetic resonance imaging study of thermal pain where we are interested in determining which brain locations mediate the relationship between the application of a thermal stimulus and self-reported pain.

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Year:  2018        PMID: 28637279      PMCID: PMC5862274          DOI: 10.1093/biostatistics/kxx027

Source DB:  PubMed          Journal:  Biostatistics        ISSN: 1465-4644            Impact factor:   5.899


  35 in total

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2.  Dynamic magnetic resonance imaging of human brain activity during primary sensory stimulation.

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Review 9.  Cognitive and emotional control of pain and its disruption in chronic pain.

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Journal:  J Am Stat Assoc       Date:  2012-12-21       Impact factor: 5.033

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  28 in total

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3.  Bayesian shrinkage estimation of high dimensional causal mediation effects in omics studies.

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Journal:  Biometrics       Date:  2019-12-19       Impact factor: 2.571

4.  Bayesian Sparse Mediation Analysis with Targeted Penalization of Natural Indirect Effects.

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Journal:  J R Stat Soc Ser C Appl Stat       Date:  2021-09-12       Impact factor: 1.864

5.  Penalized mediation models for multivariate data.

Authors:  Daniel J Schaid; Ozan Dikilitas; Jason P Sinnwell; Iftikhar J Kullo
Journal:  Genet Epidemiol       Date:  2021-10-19       Impact factor: 2.135

6.  Complier stochastic direct effects: identification and robust estimation.

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7.  Pathway Lasso: Pathway Estimation and Selection with High-Dimensional Mediators.

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Journal:  Stat Interface       Date:  2021-08-11       Impact factor: 0.716

8.  Sparse Principal Component based High-Dimensional Mediation Analysis.

Authors:  Yi Zhao; Martin A Lindquist; Brian S Caffo
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9.  Estimation and inference for the indirect effect in high-dimensional linear mediation models.

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Journal:  Biometrika       Date:  2020-05-04       Impact factor: 2.445

Review 10.  Statistical methods for mediation analysis in the era of high-throughput genomics: Current successes and future challenges.

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Journal:  Comput Struct Biotechnol J       Date:  2021-05-26       Impact factor: 7.271

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