Literature DB >> 28635966

Testing models of refugial isolation, colonization and population connectivity in two species of montane salamanders.

S M Rovito1,2, S D Schoville3,4.   

Abstract

Pleistocene glaciations have profoundly affected patterns of genetic diversity within many species. Temperate alpine organisms likely experienced dramatic range shifts, given that much of their habitat was glaciated during this time. While the effects of glaciations are relatively well understood, the spatial locations of refugia and processes that gave rise to current patterns of diversity are less well known. We use a microsatellite data set to test hypotheses of population connectivity and refugial isolation in the web-toed salamanders (Hydromantes) of the Sierra Nevada. We reject models of refugia with subsequent expansion into either the high southern Sierra or low-elevation Owens Valley, in favor of a simple isolation model with no migration between current populations. We find no evidence of migration at even moderate spatial scales using a variety of analyses in the southern Sierra, and limited migration in the northern Sierra. These results suggest that divergence in isolation following fragmentation is the dominant process structuring genetic variation in these salamander species. In the context of anthropogenic climate change and habitat degradation, these results imply that salamanders and other low-vagility alpine organisms are at risk of decline as they are unlikely to migrate across large distances.

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Mesh:

Year:  2017        PMID: 28635966      PMCID: PMC5597780          DOI: 10.1038/hdy.2017.31

Source DB:  PubMed          Journal:  Heredity (Edinb)        ISSN: 0018-067X            Impact factor:   3.821


  28 in total

1.  Inference of population structure using multilocus genotype data.

Authors:  J K Pritchard; M Stephens; P Donnelly
Journal:  Genetics       Date:  2000-06       Impact factor: 4.562

2.  SIMCOAL 2.0: a program to simulate genomic diversity over large recombining regions in a subdivided population with a complex history.

Authors:  Guillaume Laval; Laurent Excoffier
Journal:  Bioinformatics       Date:  2004-04-29       Impact factor: 6.937

Review 3.  Approximate Bayesian Computation (ABC) in practice.

Authors:  Katalin Csilléry; Michael G B Blum; Oscar E Gaggiotti; Olivier François
Journal:  Trends Ecol Evol       Date:  2010-05-18       Impact factor: 17.712

4.  CLUMPP: a cluster matching and permutation program for dealing with label switching and multimodality in analysis of population structure.

Authors:  Mattias Jakobsson; Noah A Rosenberg
Journal:  Bioinformatics       Date:  2007-05-07       Impact factor: 6.937

5.  Asynchronous demographic responses to Pleistocene climate change in Eastern Nearctic vertebrates.

Authors:  Frank T Burbrink; Yvonne L Chan; Edward A Myers; Sara Ruane; Brian Tilston Smith; Michael J Hickerson
Journal:  Ecol Lett       Date:  2016-10-25       Impact factor: 9.492

6.  Glacial survival may matter after all: nunatak signatures in the rare European populations of two west-arctic species.

Authors:  Kristine B Westergaard; Inger G Alsos; Magnus Popp; Torstein Engelskjøn; Kjell I Flatberg; Christian Brochmann
Journal:  Mol Ecol       Date:  2010-12-13       Impact factor: 6.185

7.  Fine-scale population differentiation and gene flow in a terrestrial salamander (Plethodon cinereus) living in continuous habitat.

Authors:  P R Cabe; R B Page; T J Hanlon; M E Aldrich; L Connors; D M Marsh
Journal:  Heredity (Edinb)       Date:  2006-09-27       Impact factor: 3.821

8.  Evolutionary diversification of cryophilic Grylloblatta species (Grylloblattodea: Grylloblattidae) in alpine habitats of California.

Authors:  Sean D Schoville; George K Roderick
Journal:  BMC Evol Biol       Date:  2010-06-02       Impact factor: 3.260

9.  Isolation by distance, web service.

Authors:  Jeffrey L Jensen; Andrew J Bohonak; Scott T Kelley
Journal:  BMC Genet       Date:  2005-03-11       Impact factor: 2.797

10.  Diversification of the Alpine chipmunk, Tamias alpinus, an alpine endemic of the Sierra Nevada, California.

Authors:  Emily M Rubidge; James L Patton; Craig Moritz
Journal:  BMC Evol Biol       Date:  2014-02-23       Impact factor: 3.260

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