Literature DB >> 28626524

19F-NMR-Based Dual-Site Reporter Assay for the Discovery and Distinction of Catalytic and Allosteric Kinase Inhibitors.

Lukasz Skora1, Wolfgang Jahnke1.   

Abstract

In modern kinase drug discovery, allosteric inhibitors have become a focus of attention due to their potential selectivity, but such compounds are difficult to identify. Here we describe an NMR-based competition assay using 19F-containing reporter molecules, which allows for rapid identification and discrimination between ATP-competitive and allosteric kinase inhibitors. We illustrate the principle of such a dual-site competition assay with the example of catalytic and allosteric ABL1 kinase inhibitors. The assay can also be used to identify and characterize mixed binding modes of well-known drugs, as shown for crizotinib and fingolimod.

Entities:  

Keywords:  19F-NMR; Bcr-Abl; Reporter assay; allosteric inhibition; gatekeeper mutant

Year:  2017        PMID: 28626524      PMCID: PMC5467191          DOI: 10.1021/acsmedchemlett.7b00084

Source DB:  PubMed          Journal:  ACS Med Chem Lett        ISSN: 1948-5875            Impact factor:   4.345


  15 in total

1.  Binding or bending: distinction of allosteric Abl kinase agonists from antagonists by an NMR-based conformational assay.

Authors:  Wolfgang Jahnke; Robert M Grotzfeld; Xavier Pellé; André Strauss; Gabriele Fendrich; Sandra W Cowan-Jacob; Simona Cotesta; Doriano Fabbro; Pascal Furet; Jürgen Mestan; Andreas L Marzinzik
Journal:  J Am Chem Soc       Date:  2010-05-26       Impact factor: 15.419

2.  FTY720-induced human pulmonary endothelial barrier enhancement is mediated by c-Abl.

Authors:  L Wang; E T Chiang; J T Simmons; J G N Garcia; S M Dudek
Journal:  Eur Respir J       Date:  2010-11-11       Impact factor: 16.671

3.  Structure based drug design of crizotinib (PF-02341066), a potent and selective dual inhibitor of mesenchymal-epithelial transition factor (c-MET) kinase and anaplastic lymphoma kinase (ALK).

Authors:  J Jean Cui; Michelle Tran-Dubé; Hong Shen; Mitchell Nambu; Pei-Pei Kung; Mason Pairish; Lei Jia; Jerry Meng; Lee Funk; Iriny Botrous; Michele McTigue; Neil Grodsky; Kevin Ryan; Ellen Padrique; Gordon Alton; Sergei Timofeevski; Shinji Yamazaki; Qiuhua Li; Helen Zou; James Christensen; Barbara Mroczkowski; Steve Bender; Robert S Kania; Martin P Edwards
Journal:  J Med Chem       Date:  2011-08-18       Impact factor: 7.446

Review 4.  A review of the European LeukemiaNet recommendations for the management of CML.

Authors:  Michele Baccarani; Fausto Castagnetti; Gabriele Gugliotta; Gianantonio Rosti
Journal:  Ann Hematol       Date:  2015-03-27       Impact factor: 3.673

5.  Novel approaches for targeting kinases: allosteric inhibition, allosteric activation and pseudokinases.

Authors:  Sandra W Cowan-Jacob; Wolfgang Jahnke; Stefan Knapp
Journal:  Future Med Chem       Date:  2014-04       Impact factor: 3.808

6.  FTY720, a new alternative for treating blast crisis chronic myelogenous leukemia and Philadelphia chromosome-positive acute lymphocytic leukemia.

Authors:  Paolo Neviani; Ramasamy Santhanam; Joshua J Oaks; Anna M Eiring; Mario Notari; Bradley W Blaser; Shujun Liu; Rossana Trotta; Natarajan Muthusamy; Carlo Gambacorti-Passerini; Brian J Druker; Jorge Cortes; Guido Marcucci; Ching-Shih Chen; Nicole M Verrills; Denis C Roy; Michael A Caligiuri; Clara D Bloomfield; John C Byrd; Danilo Perrotti
Journal:  J Clin Invest       Date:  2007-09       Impact factor: 14.808

7.  Expanding the diversity of allosteric bcr-abl inhibitors.

Authors:  Xianming Deng; Barun Okram; Qiang Ding; Jianming Zhang; Yongmun Choi; Francisco J Adrián; Amy Wojciechowski; Guobao Zhang; Jianwei Che; Badry Bursulaya; Sandra W Cowan-Jacob; Gabriele Rummel; Taebo Sim; Nathanael S Gray
Journal:  J Med Chem       Date:  2010-10-14       Impact factor: 7.446

8.  The secret life of kinases: functions beyond catalysis.

Authors:  Jens Rauch; Natalia Volinsky; David Romano; Walter Kolch
Journal:  Cell Commun Signal       Date:  2011-10-28       Impact factor: 5.712

Review 9.  The choice of first-line chronic myelogenous leukemia treatment.

Authors:  Carmen Fava; Giovanna Rege-Cambrin; Giuseppe Saglio
Journal:  Ann Hematol       Date:  2015-03-27       Impact factor: 3.673

10.  Bcr-Abl kinase domain mutations, drug resistance, and the road to a cure for chronic myeloid leukemia.

Authors:  Thomas O'Hare; Christopher A Eide; Michael W N Deininger
Journal:  Blood       Date:  2007-05-11       Impact factor: 22.113

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  5 in total

Review 1.  A Practical Perspective on the Roles of Solution NMR Spectroscopy in Drug Discovery.

Authors:  Qingxin Li; CongBao Kang
Journal:  Molecules       Date:  2020-06-28       Impact factor: 4.411

2.  Mesenchymal soluble factors confer imatinib drug resistance in chronic myelogenous leukemia cells.

Authors:  Ofer Regev; Noa Kidan; Meshel Nicola; Hazem Khamisie; Martin Ruthardt; Jamal Mahajna
Journal:  Arch Med Sci       Date:  2020-11-20       Impact factor: 3.318

3.  Fluorinated Phosphoadenosine 5'-Phosphosulfate Analogues for Continuous Sulfotransferase Activity Monitoring and Inhibitor Screening by 19F NMR Spectroscopy.

Authors:  Agnieszka Mlynarska-Cieslak; Mikolaj Chrominski; Tomasz Spiewla; Marek R Baranowski; Marcelina Bednarczyk; Jacek Jemielity; Joanna Kowalska
Journal:  ACS Chem Biol       Date:  2022-02-23       Impact factor: 5.100

4.  Crizotinib acts as ABL1 inhibitor combining ATP-binding with allosteric inhibition and is active against native BCR-ABL1 and its resistance and compound mutants BCR-ABL1T315I and BCR-ABL1T315I-E255K.

Authors:  Afsar Ali Mian; Isabella Haberbosch; Hazem Khamaisie; Abed Agbarya; Larissa Pietsch; Elizabeh Eshel; Dally Najib; Claudia Chiriches; Oliver Gerhard Ottmann; Oliver Hantschel; Ricardo M Biondi; Martin Ruthardt; Jamal Mahajna
Journal:  Ann Hematol       Date:  2021-06-10       Impact factor: 3.673

5.  The Influence of Varying Fluorination Patterns on the Thermodynamics and Kinetics of Benzenesulfonamide Binding to Human Carbonic Anhydrase II.

Authors:  Steffen Glöckner; Khang Ngo; Björn Wagner; Andreas Heine; Gerhard Klebe
Journal:  Biomolecules       Date:  2020-03-27
  5 in total

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