Literature DB >> 28626029

A homozygous founder mutation in TRAPPC6B associates with a neurodevelopmental disorder characterised by microcephaly, epilepsy and autistic features.

Isaac Marin-Valencia1, Gaia Novarino1,2, Anide Johansen3,4, Basak Rosti1,3,4, Mahmoud Y Issa5, Damir Musaev3,4, Gifty Bhat1, Eric Scott3,4, Jennifer L Silhavy3,4, Valentina Stanley3,4, Rasim O Rosti1,3,4, Jeremy W Gleeson3,4, Farhad B Imam6, Maha S Zaki5, Joseph G Gleeson1,3,4.   

Abstract

BACKGROUND: Transport protein particle (TRAPP) is a multisubunit complex that regulates membrane trafficking through the Golgi apparatus. The clinical phenotype associated with mutations in various TRAPP subunits has allowed elucidation of their functions in specific tissues. The role of some subunits in human disease, however, has not been fully established, and their functions remain uncertain.
OBJECTIVE: We aimed to expand the range of neurodevelopmental disorders associated with mutations in TRAPP subunits by exome sequencing of consanguineous families.
METHODS: Linkage and homozygosity mapping and candidate gene analysis were used to identify homozygous mutations in families. Patient fibroblasts were used to study splicing defect and zebrafish to model the disease.
RESULTS: We identified six individuals from three unrelated families with a founder homozygous splice mutation in TRAPPC6B, encoding a core subunit of the complex TRAPP I. Patients manifested a neurodevelopmental disorder characterised by microcephaly, epilepsy and autistic features, and showed splicing defect. Zebrafish trappc6b morphants replicated the human phenotype, displaying decreased head size and neuronal hyperexcitability, leading to a lower seizure threshold.
CONCLUSION: This study provides clinical and functional evidence of the role of TRAPPC6B in brain development and function. © Article author(s) (or their employer(s) unless otherwise stated in the text of the article) 2018. All rights reserved. No commercial use is permitted unless otherwise expressly granted.

Entities:  

Keywords:  TRAPP complex; TRAPPC6B; autism; epilepsy; intellectual disability; microcephaly

Mesh:

Substances:

Year:  2017        PMID: 28626029      PMCID: PMC6056005          DOI: 10.1136/jmedgenet-2017-104627

Source DB:  PubMed          Journal:  J Med Genet        ISSN: 0022-2593            Impact factor:   6.318


  20 in total

1.  Expression and function of NIK- and IKK2-binding protein (NIBP) in mouse enteric nervous system.

Authors:  Y Zhang; D Bitner; A A Pontes Filho; F Li; S Liu; H Wang; F Yang; S Adhikari; J Gordon; S Srinivasan; W Hu
Journal:  Neurogastroenterol Motil       Date:  2013-09-09       Impact factor: 3.598

2.  Computational analysis of TRAPPC9: candidate gene for autosomal recessive non-syndromic mental retardation.

Authors:  Naureen Aslam Khattak; Asif Mir
Journal:  CNS Neurol Disord Drug Targets       Date:  2014       Impact factor: 4.388

3.  A TRAPPC6B splicing variant associates to restless legs syndrome.

Authors:  Paolo Aridon; Maurizio De Fusco; Juliane W Winkelmann; Marco Zucconi; Valentina Arnao; Luigi Ferini-Strambi; Giorgio Casari
Journal:  Parkinsonism Relat Disord       Date:  2016-08-18       Impact factor: 4.891

4.  Recessive TRAPPC11 mutations cause a disease spectrum of limb girdle muscular dystrophy and myopathy with movement disorder and intellectual disability.

Authors:  Nina Bögershausen; Nassim Shahrzad; Jessica X Chong; Jürgen-Christoph von Kleist-Retzow; Daniela Stanga; Yun Li; Francois P Bernier; Catrina M Loucks; Radu Wirth; Eric G Puffenberger; Robert A Hegele; Julia Schreml; Gabriel Lapointe; Katharina Keupp; Christopher L Brett; Rebecca Anderson; Andreas Hahn; A Micheil Innes; Oksana Suchowersky; Marilyn B Mets; Gudrun Nürnberg; D Ross McLeod; Holger Thiele; Darrel Waggoner; Janine Altmüller; Kym M Boycott; Benedikt Schoser; Peter Nürnberg; Carole Ober; Raoul Heller; Jillian S Parboosingh; Bernd Wollnik; Michael Sacher; Ryan E Lamont
Journal:  Am J Hum Genet       Date:  2013-07-03       Impact factor: 11.025

5.  Identification of the gene (SEDL) causing X-linked spondyloepiphyseal dysplasia tarda.

Authors:  A K Gedeon; A Colley; R Jamieson; E M Thompson; J Rogers; D Sillence; G E Tiller; J C Mulley; J Gécz
Journal:  Nat Genet       Date:  1999-08       Impact factor: 38.330

6.  Homozygosity mapping in 64 Syrian consanguineous families with non-specific intellectual disability reveals 11 novel loci and high heterogeneity.

Authors:  R Abou Jamra; Sigrun Wohlfart; Markus Zweier; Steffen Uebe; Lutz Priebe; Arif Ekici; Susanne Giesebrecht; Ahmad Abboud; Mohammed Ayman Al Khateeb; Mahmoud Fakher; Saber Hamdan; Amina Ismael; Safia Muhammad; Markus M Nöthen; Johannes Schumacher; André Reis
Journal:  Eur J Hum Genet       Date:  2011-06-01       Impact factor: 4.246

7.  TRAPPC9-related autosomal recessive intellectual disability: report of a new mutation and clinical phenotype.

Authors:  Giuseppe Marangi; Vincenzo Leuzzi; Filippo Manti; Serena Lattante; Daniela Orteschi; Vanna Pecile; Giovanni Neri; Marcella Zollino
Journal:  Eur J Hum Genet       Date:  2012-05-02       Impact factor: 4.246

8.  Identification of mutations in TRAPPC9, which encodes the NIK- and IKK-beta-binding protein, in nonsyndromic autosomal-recessive mental retardation.

Authors:  Asif Mir; Liana Kaufman; Abdul Noor; Mahdi M Motazacker; Talal Jamil; Matloob Azam; Kimia Kahrizi; Muhammad Arshad Rafiq; Rosanna Weksberg; Tanveer Nasr; Farooq Naeem; Andreas Tzschach; Andreas W Kuss; Gisele E Ishak; Dan Doherty; H Hilger Ropers; A James Barkovich; Hossein Najmabadi; Muhammad Ayub; John B Vincent
Journal:  Am J Hum Genet       Date:  2009-12       Impact factor: 11.025

9.  Alzheimer's disease genes are associated with measures of cognitive ageing in the lothian birth cohorts of 1921 and 1936.

Authors:  Gillian Hamilton; Sarah E Harris; Gail Davies; David C Liewald; Albert Tenesa; John M Starr; David Porteous; Ian J Deary
Journal:  Int J Alzheimers Dis       Date:  2011-06-12

10.  Congenital muscular dystrophy with fatty liver and infantile-onset cataract caused by TRAPPC11 mutations: broadening of the phenotype.

Authors:  Wen-Chen Liang; Wenhua Zhu; Satomi Mitsuhashi; Satoru Noguchi; Michael Sacher; Megumu Ogawa; Hsiang-Hung Shih; Yuh-Jyh Jong; Ichizo Nishino
Journal:  Skelet Muscle       Date:  2015-08-28       Impact factor: 4.912

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  18 in total

1.  Dual Molecular Effects of Dominant RORA Mutations Cause Two Variants of Syndromic Intellectual Disability with Either Autism or Cerebellar Ataxia.

Authors:  Claire Guissart; Xenia Latypova; Paul Rollier; Tahir N Khan; Hannah Stamberger; Kirsty McWalter; Megan T Cho; Susanne Kjaergaard; Sarah Weckhuysen; Gaetan Lesca; Thomas Besnard; Katrin Õunap; Lynn Schema; Andreas G Chiocchetti; Marie McDonald; Julitta de Bellescize; Marie Vincent; Hilde Van Esch; Shannon Sattler; Irman Forghani; Isabelle Thiffault; Christine M Freitag; Deborah Sara Barbouth; Maxime Cadieux-Dion; Rebecca Willaert; Maria J Guillen Sacoto; Nicole P Safina; Christèle Dubourg; Lauren Grote; Wilfrid Carré; Carol Saunders; Sander Pajusalu; Emily Farrow; Anne Boland; Danielle Hays Karlowicz; Jean-François Deleuze; Monica H Wojcik; Rena Pressman; Bertrand Isidor; Annick Vogels; Wim Van Paesschen; Lihadh Al-Gazali; Aisha Mohamed Al Shamsi; Mireille Claustres; Aurora Pujol; Stephan J Sanders; François Rivier; Nicolas Leboucq; Benjamin Cogné; Souphatta Sasorith; Damien Sanlaville; Kyle Retterer; Sylvie Odent; Nicholas Katsanis; Stéphane Bézieau; Michel Koenig; Erica E Davis; Laurent Pasquier; Sébastien Küry
Journal:  Am J Hum Genet       Date:  2018-04-12       Impact factor: 11.025

2.  Further Delineation of the TRAPPC6B Disorder: Report on a New Family and Review.

Authors:  Pratibha Nair; Lara El-Bazzal; Hicham Mansour; Sandra Sabbagh; Mahmoud Taleb Al-Ali; Alicia Gambarini; Valerie Delague; Stephany El-Hayek; André Mégarbané
Journal:  J Pediatr Genet       Date:  2019-07-30

3.  Impaired XK recycling for importing manganese underlies striatal vulnerability in Huntington's disease.

Authors:  Gaurav Chhetri; Yuting Ke; Ping Wang; Muhammad Usman; Yan Li; Ellen Sapp; Jing Wang; Arabinda Ghosh; Md Ariful Islam; Xiaolong Wang; Adel Boudi; Marian DiFiglia; Xueyi Li
Journal:  J Cell Biol       Date:  2022-09-13       Impact factor: 8.077

4.  Deficiencies in vesicular transport mediated by TRAPPC4 are associated with severe syndromic intellectual disability.

Authors:  Nicole J Van Bergen; Yiran Guo; Noraldin Al-Deri; Zhanna Lipatova; Daniela Stanga; Sarah Zhao; Rakhilya Murtazina; Valeriya Gyurkovska; Davut Pehlivan; Tadahiro Mitani; Alper Gezdirici; Jayne Antony; Felicity Collins; Mary J H Willis; Zeynep H Coban Akdemir; Pengfei Liu; Jaya Punetha; Jill V Hunter; Shalini N Jhangiani; Jawid M Fatih; Jill A Rosenfeld; Jennifer E Posey; Richard A Gibbs; Ender Karaca; Sean Massey; Thisara G Ranasinghe; Patrick Sleiman; Chris Troedson; James R Lupski; Michael Sacher; Nava Segev; Hakon Hakonarson; John Christodoulou
Journal:  Brain       Date:  2020-01-01       Impact factor: 13.501

5.  The biological functions of target genes in pan-cancers and cell lines were predicted by miR-375 microarray data from GEO database and bioinformatics.

Authors:  Jiang-Hui Zeng; Xu-Zhi Liang; Hui-Hua Lan; Xu Zhu; Xiu-Yun Liang
Journal:  PLoS One       Date:  2018-10-31       Impact factor: 3.240

Review 6.  Zebrafish Models of Neurodevelopmental Disorders: Past, Present, and Future.

Authors:  Catalina Sakai; Sundas Ijaz; Ellen J Hoffman
Journal:  Front Mol Neurosci       Date:  2018-08-29       Impact factor: 5.639

Review 7.  Imaging epilepsy in larval zebrafish.

Authors:  D R W Burrows; É Samarut; J Liu; S C Baraban; M P Richardson; M P Meyer; R E Rosch
Journal:  Eur J Paediatr Neurol       Date:  2020-01-14       Impact factor: 3.140

8.  A novel homozygous variant in TRAPPC2L results in a neurodevelopmental disorder and disrupts TRAPP complex function.

Authors:  Noraldin Al-Deri; Volkan Okur; Priyanka Ahimaz; Miroslav Milev; Zaheer Valivullah; Jacob Hagen; Yufeng Sheng; Wendy Chung; Michael Sacher; Mythily Ganapathi
Journal:  J Med Genet       Date:  2020-08-25       Impact factor: 6.318

Review 9.  Emerging role of NIK/IKK2-binding protein (NIBP)/trafficking protein particle complex 9 (TRAPPC9) in nervous system diseases.

Authors:  Brittany Bodnar; Arianna DeGruttola; Yuanjun Zhu; Yuan Lin; Yonggang Zhang; Xianming Mo; Wenhui Hu
Journal:  Transl Res       Date:  2020-05-17       Impact factor: 7.012

10.  A missense mutation in TRAPPC6A leads to build-up of the protein, in patients with a neurodevelopmental syndrome and dysmorphic features.

Authors:  Hussein Sheikh Mohamoud; Saleem Ahmed; Musharraf Jelani; Nuha Alrayes; Kay Childs; Nirmal Vadgama; Mona Mohammad Almramhi; Jumana Yousuf Al-Aama; Steve Goodbourn; Jamal Nasir
Journal:  Sci Rep       Date:  2018-02-01       Impact factor: 4.379

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