Literature DB >> 28625985

Periplasmic Nicotine Dehydrogenase NdhAB Utilizes Pseudoazurin as Its Physiological Electron Acceptor in Agrobacterium tumefaciens S33.

Wenjun Yu1, Rongshui Wang1, Haiyan Huang2, Huijun Xie3, Shuning Wang4.   

Abstract

Agrobacterium tumefaciens S33 can grow with nicotine as the sole source of carbon, nitrogen, and energy via a novel hybrid of the pyridine pathway and the pyrrolidine pathway. Characterization of the enzymes involved in the hybrid pathway is important for understanding its biochemical mechanism. Here, we report that the molybdenum-containing nicotine dehydrogenase (NdhAB), which catalyzes the initial step of nicotine degradation, is located in the periplasm of strain S33, while the 6-hydroxynicotine oxidase and 6-hydroxypseudooxynicoine oxidase are in the cytoplasm. This is consistent with the fact that NdhA has a Tat signal peptide. Interestingly, an open reading frame (ORF) adjacent to the ndhAB gene was verified to encode a copper-containing electron carrier, pseudoazurin (Paz), which has a signal peptide typical of bacterial Paz proteins. Both were transported into the periplasm after being produced in the cytoplasm. We purified NdhAB from the periplasmic fraction of strain S33 and found that with Paz as the physiological electron acceptor, NdhAB catalyzed the hydroxylation of nicotine at a specific rate of 110.52 ± 8.09 μmol · min-1 · mg of protein-1, where the oxygen atom in the hydroxyl group of the product 6-hydroxynicotine was derived from H2O. The apparent Km values for nicotine and Paz were 1.64 ± 0.07 μM and 3.61 ± 0.23 μM, respectively. NAD(P)+, O2, and ferredoxin could not serve as electron acceptors. Disruption of the paz gene disabled the strain for nicotine degradation, indicating that Paz is required for nicotine catabolism in the strain. These findings help our understanding of electron transfer during nicotine degradation in bacteria.IMPORTANCE Nicotine is a toxic and addictive N-heterocyclic aromatic alkaloid produced in tobacco. Its catabolism in organisms and degradation in tobacco wastes have become major concerns for human health and the environment. Bacteria usually decompose nicotine using the classical strategy of hydroxylating the pyridine ring with the help of activated oxygen by nicotine dehydrogenase, which binds one molybdopterin, two [2Fe2S] clusters, and usually one flavin adenine dinucleotide (FAD) as well. However, the physiological electron acceptor for the reaction is still unknown. In this study, we found that the two-component nicotine dehydrogenase from Agrobacterium tumefaciens S33, naturally lacking an FAD-binding domain, is located in the periplasmic space and uses a copper-containing electron carrier, pseudoazurin, as its physiological electron acceptor. We report here the role of pseudoazurin in a reaction catalyzed by a molybdopterin-containing hydroxylase occurring in the periplasmic space. These results provide new biochemical knowledge on microbial degradation of N-heterocyclic aromatic compounds.
Copyright © 2017 American Society for Microbiology.

Entities:  

Keywords:  Agrobacterium tumefaciens; electron acceptor; hydroxylase; nicotine degradation; nicotine dehydrogenase; periplasm; pseudoazurin

Year:  2017        PMID: 28625985      PMCID: PMC5561295          DOI: 10.1128/AEM.01050-17

Source DB:  PubMed          Journal:  Appl Environ Microbiol        ISSN: 0099-2240            Impact factor:   4.792


  64 in total

1.  Pseudoazurin mediates periplasmic electron flow in a mutant strain of Paracoccus denitrificans lacking cytochrome c550.

Authors:  M Koutný; I Kucera; R Tesarík; J Turánek; R J Van Spanning
Journal:  FEBS Lett       Date:  1999-04-01       Impact factor: 4.124

2.  Crystal structure of histamine dehydrogenase from Nocardioides simplex.

Authors:  Timothy Reed; Gerald H Lushington; Yan Xia; Hidehiko Hirakawa; DeAnna M Travis; Minae Mure; Emily E Scott; Julian Limburg
Journal:  J Biol Chem       Date:  2010-06-10       Impact factor: 5.157

3.  The 1.4 A resolution structure of Paracoccus pantotrophus pseudoazurin.

Authors:  Shabir Najmudin; Sofia R Pauleta; Isabel Moura; Maria J Romão
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2010-05-25

Review 4.  The mononuclear molybdenum enzymes.

Authors:  Russ Hille; James Hall; Partha Basu
Journal:  Chem Rev       Date:  2014-01-28       Impact factor: 60.622

5.  Covalently bound flavin in D-6-hydroxynicotine oxidase from Arthrobacter oxidans. Purification and properties of D-6-hydroxynicotine oxidase.

Authors:  M Brühmüller; H Möhler; K Decker
Journal:  Eur J Biochem       Date:  1972-08-18

6.  Nicotine Dehydrogenase Complexed with 6-Hydroxypseudooxynicotine Oxidase Involved in the Hybrid Nicotine-Degrading Pathway in Agrobacterium tumefaciens S33.

Authors:  Huili Li; Kebo Xie; Wenjun Yu; Liejie Hu; Haiyan Huang; Huijun Xie; Shuning Wang
Journal:  Appl Environ Microbiol       Date:  2016-01-04       Impact factor: 4.792

Review 7.  Copper protein structures.

Authors:  E T Adman
Journal:  Adv Protein Chem       Date:  1991

8.  The purification of a cd1-type nitrite reductase from, and the absence of a copper-type nitrite reductase from, the aerobic denitrifier Thiosphaera pantotropha; the role of pseudoazurin as an electron donor.

Authors:  J W Moir; D Baratta; D J Richardson; S J Ferguson
Journal:  Eur J Biochem       Date:  1993-03-01

9.  Structural analysis and molybdenum-dependent expression of the pAO1-encoded nicotine dehydrogenase genes of Arthrobacter nicotinovorans.

Authors:  S Grether-Beck; G L Igloi; S Pust; E Schilz; K Decker; R Brandsch
Journal:  Mol Microbiol       Date:  1994-09       Impact factor: 3.501

10.  How are "Atypical" Sulfite Dehydrogenases Linked to Cell Metabolism? Interactions between the SorT Sulfite Dehydrogenase and Small Redox Proteins.

Authors:  Louie Low; James Ryan Kilmartin; Bernhardt Paul V; Kappler Ulrike
Journal:  Front Microbiol       Date:  2011-03-25       Impact factor: 5.640

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  4 in total

1.  6-Hydroxypseudooxynicotine Dehydrogenase Delivers Electrons to Electron Transfer Flavoprotein during Nicotine Degradation by Agrobacterium tumefaciens S33.

Authors:  Rongshui Wang; Jihong Yi; Jinmeng Shang; Wenjun Yu; Zhifeng Li; Haiyan Huang; Huijun Xie; Shuning Wang
Journal:  Appl Environ Microbiol       Date:  2019-05-16       Impact factor: 4.792

Review 2.  Physiology of a Hybrid Pathway for Nicotine Catabolism in Bacteria.

Authors:  Haiyan Huang; Jinmeng Shang; Shuning Wang
Journal:  Front Microbiol       Date:  2020-11-12       Impact factor: 5.640

3.  An NAD-Specific 6-Hydroxy-3-Succinoyl-Semialdehyde-Pyridine Dehydrogenase from Nicotine-Degrading Agrobacterium tumefaciens Strain S33.

Authors:  Jinmeng Shang; Xia Wang; Meng Zhang; Lexin Li; Rufei Wang; Haiyan Huang; Shuning Wang
Journal:  Microbiol Spectr       Date:  2021-08-11

4.  Green route to synthesis of valuable chemical 6-hydroxynicotine from nicotine in tobacco wastes using genetically engineered Agrobacterium tumefaciens S33.

Authors:  Wenjun Yu; Rongshui Wang; Huili Li; Jiyu Liang; Yuanyuan Wang; Haiyan Huang; Huijun Xie; Shuning Wang
Journal:  Biotechnol Biofuels       Date:  2017-12-04       Impact factor: 6.040

  4 in total

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