| Literature DB >> 28623599 |
Ivan Sukuba1,2, Alexander Kaiser3, Stefan E Huber3, Jan Urban4, Michael Probst3.
Abstract
Enthalpies and free energies of reaction for small neutral and charged beryllium deuterides BeD, BeD2, and BeD3 that have been calculated are reported for a temperature range of 0 K to 1000 K. We discuss probable dissociation channels and possible ways of producing BeD by localizing the relevant transition states and by calculating corresponding rate constants. BeD and BeD+ are found to be the most stable ones among the considered compounds. BeD2 and [Formula: see text] are more likely to decompose into Be0,+ + D2 than into BeD0,+ + D. The metastable BeD3 and [Formula: see text] predominantly decompose into BeD0,+ + D2. In light of our results on the reaction energetics, we can interpret the pathways for production of BeD via BeD2 and BeD3 intermediates observed in molecular dynamics simulations.Entities:
Keywords: Beryllium deuterides; Dissociation; ITER; Molecular dynamics; Quantum-chemical calculations; Reactivity
Year: 2017 PMID: 28623599 PMCID: PMC5487901 DOI: 10.1007/s00894-017-3362-4
Source DB: PubMed Journal: J Mol Model ISSN: 0948-5023 Impact factor: 1.810
Enthalpies of formation of elements in the gas state and thermal corrections to these enthalpies. Values are in kJ mol-1 rounded to two decimal points. Experimental and calculated for hydrogen atoms were obtained from H2 (D2) values with the NIST-JANAF database [49]. The reference state for Be is a hcp crystal structure up to 1560 K, the calculated value refers to the gas state
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| 319.74 | 1219.23 | 216.04 | 1488.36 | 219.77 | 1492.29 |
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| 1.93 | 6.20 | 4.23 | 4.29 | 4.29 | 4.33 |
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| 6.20 | 6.20 | 4.34 | 4.34 | 4.34 | 4.34 |
Comparison of calculated thermodynamic properties as obtained by various methods for BeH, BeH2, and H2(D2) molecules to known experimental values. ∆ H ° is in kJ mol-1, Re in Å, and ωe in cm−1. The enthalpy of formation for BeH and its estimation for BeH2 are taken from ref. [50]. Experimental values for the hydrogen molecule are taken from the NIST-JANAF thermochemical Tables [49]. Spectroscopic values for BeH and BeH2 are retrieved from ref. [32, 33]. for BeH2 corresponds to the asymmetric stretching vibration and to the bending vibration
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| 307.86 | 1.340 | 2062.4 | 133.7 | 1.324 | 2263.5 | 724.8 | 0.742 | 4415.2 | 3123.2 |
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| 328.60 | 1.367 | 1936.8 | 140.98 | 1.337 | 2201.8 | 706.0 | 0.744 | 4373.5 | 3093.7 |
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| 316.65 | 1.338 | 2084.9 | 144.90 | 1.323 | 2278.4 | 726.8 | 0.740 | 4461.2 | 3155.8 |
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| 313.34 | 1.341 | 2089.0 | 128.77 | 1.326 | 2264.6 | 705.2 | 0.744 | 4423.8 | 3129.3 |
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| 331.52 | 1.344 | 2064.5 | 158.93 | 1.327 | 2275.6 | 746.3 | 0.743 | 4465.7 | 3159.0 |
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| 340.23 | 1.342 | 2062.4 | 168.31 | 1.327 | 2257.2 | 717.1 | 0.742 | 4401.1 | 3113.2 |
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| 321 ± 30 | 1.342 | 2061.4 | 125.52 | 1.326 | 2255.2 | 706.3 | 0.741 | 4401.2 | 3115.5 |
Fig. 1Sputtering yields obtained from MD simulations of D irradiated Be surfaces compared with literature data [15]
Bond lengths and angles of the beryllium hydrides. The lengths are given in Å, angles in degrees. For the meaning of R1 and R2 see Fig. 3. The data for BeH and BeH2 are given in Table 2
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| 1.313 | 1.408 | 1.411 | 93.3 | 1.877 | 23.6 | 1.322 | 1.417 | 1.299 | 1.663 | 1.415 |
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| 1.324 | 1.424 | 1.427 | 99.2 | 1.921 | 23.1 | 1.333 | 1.432 | 1.311 | 1.706 | 1.430 |
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| 1.310 | 1.407 | 1.403 | 86.5 | 1.403 | 86.5 | 1.321 | 1.415 | 1.297 | 1.655 | 1.413 |
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| 1.307 | 1.397 | 1.404 | 89.5 | 1.883 | 23.5 | 1.322 | 1.421 | 1.298 | 1.693 | 1.415 |
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| 1.320 | 1.477 | 1.416 | 94.6 | 1.855 | 23.8 | 1.324 | 1.418 | 1.305 | 1.657 | 1.408 |
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| 1.311 | 1.412 | 1.399 | 80.1 | 1.817 | 24.3 | 1.324 | 1.416 | 1.299 | 1.651 | 1.418 |
Dissociation energy D0 and enthalpy of formation for the neutral beryllium deuterides. The electron affinity EA of BeH and BeH3 are also listed. All values are in kJ mol-1
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| 233.6 | 308.4 | 625.6 | 132.8 | 680.5 | 295.8 | 50.9 | 275.1 |
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| 212.7 | 329.3 | 618.2 | 140.3 | 668.4 | 307.9 | 70.9 | 273.1 |
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| 207.4 | 334.6 | 597.0 | 161.4 | 633.6 | 342.6 | 39.4 | 267.8 |
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| 224.9 | 317.1 | 614.5 | 143.9 | 658.4 | 317.7 | 44.6 | 273.1 |
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| 228.2 | 313.8 | 630.6 | 127.9 | 661.4 | 314.9 | 63.0 | 286.2 |
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| 198.1 | 340.7 | 591.0 | 167.4 | 628.1 | 348.1 | 51.8 | 278.0 |
Dissociation energy D0 and enthalpy of formation for the cationic beryllium deuterides. All values are in kJ mol-1
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| 292.7 | 395.7 | 395.7 | 1148.8 | 482.6 | 1177.2 | 831.8 | 1045.1 |
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| 316.8 | 414.3 | 414.3 | 1124.7 | 483.5 | 1776.4 | 853.6 | 1023.5 |
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| 301.3 | 361.5 | 361.5 | 1140.2 | 472.8 | 1189.7 | 835.8 | 1041.0 |
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| 289.6 | 363.3 | 363.3 | 1151.9 | 465.8 | 1195.0 | 822.2 | 1054.8 |
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| 306.6 | 379.5 | 379.5 | 1134.9 | 477.1 | 1182.4 | 832.8 | 1044.3 |
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| 296.8 | 370.5 | 370.5 | 1144.7 | 471.1 | 1188.1 | 828.7 | 1048.2 |
Fig. 3Structures of a) neutral, b) cationic, and c) anionic BeD3 obtained with B3LYP-D
Fig. 2Local minima of cationic BeD2 obtained with CCSD(T). a-c refer to the structures I, II, and III in the text
Bond lengths and angles of corresponding optimized structures obtained by B3LYP-D and CCSD(T) methods compared with data from ref. [29]
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| 1.324 | 1.433 | 42.3 | -- | -- | 1.877 | 23.6 |
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| 1.327 | 1.438 | 39.7 | 1.323 | 1.716 | 1.817 | 24.3 |
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| 1.330 | 1.445 | 40.0 | 1.320 | 1.731 | 1.798 | 24.6 |
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| 1.330 | 1.442 | 39.8 | 1.327 | 1.723 | 1.794 | 24.7 |
Fig. 4Changes of the standard free energies of reaction for a) neutral and b) positive beryllium deuterides given by B3LYP-D (full circle) and CCSD(T) (empty square) methods
Changes of the enthalpy of reaction at 298.15 K and changes of the free energy of reaction at 298.15 and 1000 K for the dissociation of neutral beryllium deuterides obtained from various methods. MR ACPF values are calculated from data in ref. [22]. All values are in kJ mol-1. The threshold temperature Tk for crossing the log(KEQ) > −5 limit is also given
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| ∆ | ∆ | ∆ | ∆ | ∆ | ∆ | ∆ | ∆ | ∆ | ∆ | ||||||
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| 298.15 | 1000 | 298.15 | 1000 | 298.15 | 1000 | 298.15 | 1000 | 298.15 | 1000 | |||||
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| 237.3 | 214.4 | 155.2 | 188.0 | 159.5 | 89.8 | 397.3 | 361.2 | 273.0 | 9.5 | −20.0 | −88.8 | 58.7 | 35.0 | -23.4 |
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| 216.4 | 193.6 | 134.7 | 174.0 | 145.6 | 76.3 | 410.7 | 374.6 | 286.5 | 11.7 | −17.6 | −85.9 | 54.1 | 30.5 | -27.4 |
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| 228.6 | 205.67 | 146.4 | 183.5 | 154.9 | 85.2 | 394.9 | 358.8 | 270.5 | 2.8 | −26.8 | −96.1 | 47.9 | 24.0 | -34.8 |
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| 231,9 | 209.0 | 149.7 | 202.6 | 174.1 | 104.6 | 407.6 | 371.6 | 283.7 | 5.4 | −23.9 | −92.1 | 34.7 | 11.0 | -47.0 |
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| 211,0 | 188.1 | 128.9 | 161.1 | 132.5 | 62.5 | 395.0 | 358.8 | 270.3 | −9.8 | −39.4 | −108.8 | 40.1 | 15.4 | -43.7 |
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| 204.5 | 182.1 | 122.8 | 158.0 | 129.5 | 59.9 | 395.0 | 358.9 | 270.8 | −5.9 | −35.5 | −104.8 | 31.0 | 17.1 | -41.8 |
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| 206.6 | 186.4 | 131.9 | --- | --- | --- | --- | --- | --- | --- | --- | --- | --- | --- | --- |
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| ∼800 |
| already at 0 | ∼200 | ||||||||||
Changes of the standard enthalpy of reaction at 298.15 K and changes of the standard free energy of reaction at 298.15 and 1000 K for dissociation of cationic beryllium deuterides obtained from various methods. MR ACPF values are calculated from data in ref. [23]. All values are in kJ mol-1. The values for the bent structure of are used here. The threshold temperature Tk for crossing log(KEQ) > −5 limit is also presented
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| ∆ | ∆ | ∆ | ∆ | ∆ | ∆ | ∆ | ∆ | |||||
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| 298.15 | 1000 | 298.15 | 1000 | 298.15 | 1000 | 298.15 | 1000 | ||||
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| 296.4 | 269.9 | 202.2 | 43.3 | 23.1 | −25.5 | 106.5 | 81.2 | 19.4 | 99.8 | 70.5 | 2.0 |
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| 320.5 | 294.1 | 226.5 | 37.4 | 16.2 | −35.0 | 101.2 | 75.9 | 13.9 | 91.5 | 64.4 | 1.5 |
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| 293.0 | 266.5 | 198.7 | 38.7 | 16.4 | −37.8 | 92.2 | 66.4 | 3.2 | 99.7 | 72.0 | 7.4 |
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| 310.3 | 283.9 | 216.1 | 36.4 | 14.2 | −39.8 | 84.5 | 58.5 | −5.6 | 97.1 | 70.0 | 7.0 |
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| 304.8 | 278.4 | 210.8 | 39.6 | −17.5 | −35.9 | 76.0 | 50.9 | −10.6 | 97.3 | 69.4 | 4.4 |
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| 300.5 | 274.1 | 206.3 | 36.9 | −14.2 | −41.0 | 77.6 | 51.5 | −12.6 | 98.0 | 70.3 | 5.7 |
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| 301.9 | 278.9 | 215.5 | --- | --- | --- | --- | --- | --- | --- | --- | --- |
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| ∼300 | ∼400 | ∼500 | ||||||||
Bond lengths and angles of the transition states obtained by CCSD(T) for studied dissociation channels in Eqs. 7 and 8. The lengths are given in Å, angles in degrees. These structures are presented in Fig. 5
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| Be-H1 | 1.379 | 1.344 | 1.323 | 1.340 | 1.339 |
| Be-H2 | 1.646 | 2.827 | 1.403 | 1.852 | 1.714 |
| Be-H3 | --- | --- | 1.498 | 1.917 | 1.776 |
| H1-Be-H2 | 43.5 | 67.5 | 161.2 | 109.5 | 113.5 |
| H1-Be-H3 | --- | --- | 123.4 | 86.3 | 87.9 |
Activation energies ΔG‡ corresponding to the transition states TS for the dissociation channels of the beryllium deuterides at 298.15 K, 600 K, and 1000 K for the forward and reverse reactions obtained by the CCSD(T) method
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| T [K] | 298.15 | 600 | 1000 | 298.15 | 600 | 1000 | |
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| TS1 | 392.6 | 385.8 | 377.8 | 263.1 | 286.0 | 317.9 |
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| TS2 | 377.4 | 362.9 | 344.6 | 18.5 | 41.4 | 73.8 |
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| TS3 | 13.4 | 16.3 | 22.4 | 48.9 | 82.0 | 127.2 |
| TS4 | -0.5 | −1.3 | −0.6 | 34.9 | 64.4 | 104.2 | |
Fig. 5Structures of the transition states for dissociation channels 7.b-d
Fig. 6Dependence of reaction rates on temperature in the linear form of Eyring equation (Eq. 6.b) for channels with identified transition states