Literature DB >> 28620027

Metal coordination in kinases and pseudokinases.

Matthias J Knape1, Friedrich W Herberg2.   

Abstract

Protein phosphorylation, mediated by protein kinases, is a key event in the regulation of eukaryotic signal transduction. The majority of eukaryotic protein kinases perform phosphoryl transfer, assisted by two divalent metal ions. About 10% of all human protein kinases are, however, thought to be catalytically inactive. These kinases lack conserved residues of the kinase core and are classified as pseudokinases. Yet, it has been demonstrated that pseudokinases are critically involved in biological functions. Here, we show how pseudokinases have developed strategies by modifying amino acid residues in order to achieve stable, active-like conformations. This includes binding of the co-substrate ATP in a two metal-, one metal- or even no metal-binding mode. Examples of the respective pseudokinases are provided on a structural basis and compared with a canonical protein kinase, Protein Kinase A. Moreover, the functional roles of both independent metal-binding sites, Me1 and Me2, are discussed. Lack of phosphotransferase activity does not implicate a loss of function and can easily point to alternative roles of pseudokinases, i.e. acting as switches or scaffolds, and having evolved as components crucial for cellular cross-talk and signaling. Interestingly, pseudokinases are present in all kingdoms of life and their specific roles remain enigmatic. More studies are needed to unravel the crucial functions of those interesting proteins.
© 2017 The Author(s); published by Portland Press Limited on behalf of the Biochemical Society.

Entities:  

Keywords:  metalloenzymes; phosphorylation/dephosphorylation; pseudokinases

Mesh:

Substances:

Year:  2017        PMID: 28620027     DOI: 10.1042/BST20160327

Source DB:  PubMed          Journal:  Biochem Soc Trans        ISSN: 0300-5127            Impact factor:   5.407


  4 in total

1.  High-Resolution Structure and Inhibition of the Schizophrenia-Linked Pseudokinase ULK4.

Authors:  Susmita Khamrui; Peter M U Ung; Cody Secor; Avner Schlessinger; Michael B Lazarus
Journal:  J Am Chem Soc       Date:  2019-12-17       Impact factor: 15.419

Review 2.  The pseudokinase domain in receptor guanylyl cyclases.

Authors:  Avipsa Bose; Sandhya S Visweswariah
Journal:  Methods Enzymol       Date:  2022-04-18       Impact factor: 1.682

3.  Activation loop dynamics are controlled by conformation-selective inhibitors of ERK2.

Authors:  Laurel M Pegram; Jennifer C Liddle; Yao Xiao; Maria Hoh; Johannes Rudolph; Dylan B Iverson; Guy P Vigers; Darin Smith; Hailong Zhang; Weiru Wang; John G Moffat; Natalie G Ahn
Journal:  Proc Natl Acad Sci U S A       Date:  2019-07-16       Impact factor: 11.205

Review 4.  Role of Divalent Cations in HIV-1 Replication and Pathogenicity.

Authors:  Nabab Khan; Xuesong Chen; Jonathan D Geiger
Journal:  Viruses       Date:  2020-04-21       Impact factor: 5.048

  4 in total

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