Literature DB >> 28615793

Classification of Clinical Significance of MRI Prostate Findings Using 3D Convolutional Neural Networks.

Alireza Mehrtash1,2, Alireza Sedghi3, Mohsen Ghafoorian1,4, Mehdi Taghipour1, Clare M Tempany1, William M Wells1, Tina Kapur1, Parvin Mousavi3, Purang Abolmaesumi2, Andriy Fedorov1.   

Abstract

Prostate cancer (PCa) remains a leading cause of cancer mortality among American men. Multi-parametric magnetic resonance imaging (mpMRI) is widely used to assist with detection of PCa and characterization of its aggressiveness. Computer-aided diagnosis (CADx) of PCa in MRI can be used as clinical decision support system to aid radiologists in interpretation and reporting of mpMRI. We report on the development of a convolution neural network (CNN) model to support CADx in PCa based on the appearance of prostate tissue in mpMRI, conducted as part of the SPIE-AAPM-NCI PROSTATEx challenge. The performance of different combinations of mpMRI inputs to CNN was assessed and the best result was achieved using DWI and DCE-MRI modalities together with the zonal information of the finding. On the test set, the model achieved an area under the receiver operating characteristic curve of 0.80.

Entities:  

Year:  2017        PMID: 28615793      PMCID: PMC5467889          DOI: 10.1117/12.2277123

Source DB:  PubMed          Journal:  Proc SPIE Int Soc Opt Eng        ISSN: 0277-786X


  8 in total

1.  DeepInfer: Open-Source Deep Learning Deployment Toolkit for Image-Guided Therapy.

Authors:  Alireza Mehrtash; Mehran Pesteie; Jorden Hetherington; Peter A Behringer; Tina Kapur; William M Wells; Robert Rohling; Andriy Fedorov; Purang Abolmaesumi
Journal:  Proc SPIE Int Soc Opt Eng       Date:  2017-03-03

Review 2.  A survey on deep learning in medical image analysis.

Authors:  Geert Litjens; Thijs Kooi; Babak Ehteshami Bejnordi; Arnaud Arindra Adiyoso Setio; Francesco Ciompi; Mohsen Ghafoorian; Jeroen A W M van der Laak; Bram van Ginneken; Clara I Sánchez
Journal:  Med Image Anal       Date:  2017-07-26       Impact factor: 8.545

3.  Deep multi-scale location-aware 3D convolutional neural networks for automated detection of lacunes of presumed vascular origin.

Authors:  Mohsen Ghafoorian; Nico Karssemeijer; Tom Heskes; Mayra Bergkamp; Joost Wissink; Jiri Obels; Karlijn Keizer; Frank-Erik de Leeuw; Bram van Ginneken; Elena Marchiori; Bram Platel
Journal:  Neuroimage Clin       Date:  2017-02-04       Impact factor: 4.881

4.  Cancer Statistics, 2017.

Authors:  Rebecca L Siegel; Kimberly D Miller; Ahmedin Jemal
Journal:  CA Cancer J Clin       Date:  2017-01-05       Impact factor: 508.702

5.  Assessment of PI-RADS v2 for the Detection of Prostate Cancer.

Authors:  Moritz Kasel-Seibert; Thomas Lehmann; René Aschenbach; Felix V Guettler; Mohamed Abubrig; Marc-Oliver Grimm; Ulf Teichgraeber; Tobias Franiel
Journal:  Eur J Radiol       Date:  2016-01-19       Impact factor: 3.528

Review 6.  Computer-aided Detection of Prostate Cancer with MRI: Technology and Applications.

Authors:  Lizhi Liu; Zhiqiang Tian; Zhenfeng Zhang; Baowei Fei
Journal:  Acad Radiol       Date:  2016-04-25       Impact factor: 3.173

Review 7.  Multiparametric MRI of prostate cancer: an update on state-of-the-art techniques and their performance in detecting and localizing prostate cancer.

Authors:  John V Hegde; Robert V Mulkern; Lawrence P Panych; Fiona M Fennessy; Andriy Fedorov; Stephan E Maier; Clare M C Tempany
Journal:  J Magn Reson Imaging       Date:  2013-05       Impact factor: 4.813

8.  Location Sensitive Deep Convolutional Neural Networks for Segmentation of White Matter Hyperintensities.

Authors:  Mohsen Ghafoorian; Nico Karssemeijer; Tom Heskes; Inge W M van Uden; Clara I Sanchez; Geert Litjens; Frank-Erik de Leeuw; Bram van Ginneken; Elena Marchiori; Bram Platel
Journal:  Sci Rep       Date:  2017-07-11       Impact factor: 4.379

  8 in total
  21 in total

1.  Pulmonary nodule classification in lung cancer screening with three-dimensional convolutional neural networks.

Authors:  Shuang Liu; Yiting Xie; Artit Jirapatnakul; Anthony P Reeves
Journal:  J Med Imaging (Bellingham)       Date:  2017-11-14

2.  PROSTATEx Challenges for computerized classification of prostate lesions from multiparametric magnetic resonance images.

Authors:  Samuel G Armato; Henkjan Huisman; Karen Drukker; Lubomir Hadjiiski; Justin S Kirby; Nicholas Petrick; George Redmond; Maryellen L Giger; Kenny Cha; Artem Mamonov; Jayashree Kalpathy-Cramer; Keyvan Farahani
Journal:  J Med Imaging (Bellingham)       Date:  2018-11-10

3.  Classification of suspicious lesions on prostate multiparametric MRI using machine learning.

Authors:  Deukwoo Kwon; Isildinha M Reis; Adrian L Breto; Yohann Tschudi; Nicole Gautney; Olmo Zavala-Romero; Christopher Lopez; John C Ford; Sanoj Punnen; Alan Pollack; Radka Stoyanova
Journal:  J Med Imaging (Bellingham)       Date:  2018-09-06

4.  Semi-automatic classification of prostate cancer on multi-parametric MR imaging using a multi-channel 3D convolutional neural network.

Authors:  Nader Aldoj; Steffen Lukas; Marc Dewey; Tobias Penzkofer
Journal:  Eur Radiol       Date:  2019-08-29       Impact factor: 5.315

5.  Respiratory motion correction for free-breathing 3D abdominal MRI using CNN-based image registration: a feasibility study.

Authors:  Jun Lv; Ming Yang; Jue Zhang; Xiaoying Wang
Journal:  Br J Radiol       Date:  2018-01-31       Impact factor: 3.039

6.  Fully automated detection of breast cancer in screening MRI using convolutional neural networks.

Authors:  Mehmet Ufuk Dalmış; Suzan Vreemann; Thijs Kooi; Ritse M Mann; Nico Karssemeijer; Albert Gubern-Mérida
Journal:  J Med Imaging (Bellingham)       Date:  2018-01-11

7.  Classification of Tumor Epithelium and Stroma by Exploiting Image Features Learned by Deep Convolutional Neural Networks.

Authors:  Yue Du; Roy Zhang; Abolfazl Zargari; Theresa C Thai; Camille C Gunderson; Katherine M Moxley; Hong Liu; Bin Zheng; Yuchen Qiu
Journal:  Ann Biomed Eng       Date:  2018-07-26       Impact factor: 3.934

8.  Fully automatic catheter segmentation in MRI with 3D convolutional neural networks: application to MRI-guided gynecologic brachytherapy.

Authors:  Paolo Zaffino; Guillaume Pernelle; Andre Mastmeyer; Alireza Mehrtash; Hongtao Zhang; Ron Kikinis; Tina Kapur; Maria Francesca Spadea
Journal:  Phys Med Biol       Date:  2019-08-14       Impact factor: 3.609

Review 9.  Radiological images and machine learning: Trends, perspectives, and prospects.

Authors:  Zhenwei Zhang; Ervin Sejdić
Journal:  Comput Biol Med       Date:  2019-02-27       Impact factor: 4.589

10.  Automatic Needle Segmentation and Localization in MRI With 3-D Convolutional Neural Networks: Application to MRI-Targeted Prostate Biopsy.

Authors:  Alireza Mehrtash; Mohsen Ghafoorian; Guillaume Pernelle; Alireza Ziaei; Friso G Heslinga; Kemal Tuncali; Andriy Fedorov; Ron Kikinis; Clare M Tempany; William M Wells; Purang Abolmaesumi; Tina Kapur
Journal:  IEEE Trans Med Imaging       Date:  2018-10-18       Impact factor: 10.048

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