Literature DB >> 28615311

Modeling Physiological Events in 2D vs. 3D Cell Culture.

Kayla Duval1, Hannah Grover1, Li-Hsin Han2, Yongchao Mou3, Adrian F Pegoraro4, Jeffery Fredberg5, Zi Chen6.   

Abstract

Cell culture has become an indispensable tool to help uncover fundamental biophysical and biomolecular mechanisms by which cells assemble into tissues and organs, how these tissues function, and how that function becomes disrupted in disease. Cell culture is now widely used in biomedical research, tissue engineering, regenerative medicine, and industrial practices. Although flat, two-dimensional (2D) cell culture has predominated, recent research has shifted toward culture using three-dimensional (3D) structures, and more realistic biochemical and biomechanical microenvironments. Nevertheless, in 3D cell culture, many challenges remain, including the tissue-tissue interface, the mechanical microenvironment, and the spatiotemporal distributions of oxygen, nutrients, and metabolic wastes. Here, we review 2D and 3D cell culture methods, discuss advantages and limitations of these techniques in modeling physiologically and pathologically relevant processes, and suggest directions for future research.
Copyright © 2017 the American Physiological Society.

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Mesh:

Year:  2017        PMID: 28615311      PMCID: PMC5545611          DOI: 10.1152/physiol.00036.2016

Source DB:  PubMed          Journal:  Physiology (Bethesda)        ISSN: 1548-9221


  126 in total

1.  Fabrication of functional three-dimensional tissues by stacking cell sheets in vitro.

Authors:  Yuji Haraguchi; Tatsuya Shimizu; Tadashi Sasagawa; Hidekazu Sekine; Katsuhisa Sakaguchi; Tetsutaro Kikuchi; Waki Sekine; Sachiko Sekiya; Masayuki Yamato; Mitsuo Umezu; Teruo Okano
Journal:  Nat Protoc       Date:  2012-04-05       Impact factor: 13.491

2.  Proof-of-concept of a novel micro-bioreactor for fast development of industrial bioprocesses.

Authors:  N Reis; C N Gonçalves; A A Vicente; J A Teixeira
Journal:  Biotechnol Bioeng       Date:  2006-11-05       Impact factor: 4.530

Review 3.  Tissue cells feel and respond to the stiffness of their substrate.

Authors:  Dennis E Discher; Paul Janmey; Yu-Li Wang
Journal:  Science       Date:  2005-11-18       Impact factor: 47.728

4.  Kidney spheroids recapitulate tubular organoids leading to enhanced tubulogenic potency of human kidney-derived cells.

Authors:  Ella Buzhor; Orit Harari-Steinberg; Dorit Omer; Sally Metsuyanim; Jasmine Jacob-Hirsch; Tsahi Noiman; Zohar Dotan; Ronald S Goldstein; Benjamin Dekel
Journal:  Tissue Eng Part A       Date:  2011-06-14       Impact factor: 3.845

5.  Construction of the recellularized corneal stroma using porous acellular corneal scaffold.

Authors:  Jianhui Xiao; Hucheng Duan; Zhao Liu; Zheng Wu; Yuqing Lan; Wei Zhang; Chaoyang Li; Fen Chen; Qiang Zhou; Xiaoran Wang; Junqi Huang; Zhichong Wang
Journal:  Biomaterials       Date:  2011-06-29       Impact factor: 12.479

6.  Mechanistic pharmacokinetic modeling for the prediction of transporter-mediated disposition in humans from sandwich culture human hepatocyte data.

Authors:  Hannah M Jones; Hugh A Barton; Yurong Lai; Yi-An Bi; Emi Kimoto; Sarah Kempshall; Sonya C Tate; Ayman El-Kattan; J Brian Houston; Aleksandra Galetin; Katherine S Fenner
Journal:  Drug Metab Dispos       Date:  2012-02-16       Impact factor: 3.922

7.  Taking cell-matrix adhesions to the third dimension.

Authors:  E Cukierman; R Pankov; D R Stevens; K M Yamada
Journal:  Science       Date:  2001-11-23       Impact factor: 47.728

Review 8.  Organs-on-chips at the frontiers of drug discovery.

Authors:  Eric W Esch; Anthony Bahinski; Dongeun Huh
Journal:  Nat Rev Drug Discov       Date:  2015-03-20       Impact factor: 84.694

9.  Cell viability assessment using the Alamar blue assay: a comparison of 2D and 3D cell culture models.

Authors:  F Bonnier; M E Keating; T P Wróbel; K Majzner; M Baranska; A Garcia-Munoz; A Blanco; H J Byrne
Journal:  Toxicol In Vitro       Date:  2014-10-06       Impact factor: 3.500

10.  Hidden in the mist no more: physical force in cell biology.

Authors:  Karin Wang; Li-Heng Cai; Bo Lan; Jeffrey J Fredberg
Journal:  Nat Methods       Date:  2016-02       Impact factor: 28.547

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  311 in total

1.  [Effects of the injectable glycol-chitosan based hydrogel on the proliferation and differentiation of human dental pulp cells].

Authors:  C L Cao; C C Yang; X Z Qu; B Han; X Y Wang
Journal:  Beijing Da Xue Xue Bao Yi Xue Ban       Date:  2020-02-18

Review 2.  Extracellular matrix dynamics in cell migration, invasion and tissue morphogenesis.

Authors:  Kenneth M Yamada; Joshua W Collins; David A Cruz Walma; Andrew D Doyle; Shaimar Gonzalez Morales; Jiaoyang Lu; Kazue Matsumoto; Shayan S Nazari; Rei Sekiguchi; Yoshinari Shinsato; Shaohe Wang
Journal:  Int J Exp Pathol       Date:  2019-06-10       Impact factor: 1.925

3.  A Three-Dimensional In Vitro Coculture Model to Quantify Breast Epithelial Cell Adhesion to Endothelial Cells.

Authors:  Swathi Swaminathan; Aaron N Cranston; Alisa Morss Clyne
Journal:  Tissue Eng Part C Methods       Date:  2019-09-26       Impact factor: 3.056

4.  Role of TRPV4 in matrix stiffness-induced expression of EMT-specific LncRNA.

Authors:  Shweta Sharma; Li Ma; Shaik O Rahaman
Journal:  Mol Cell Biochem       Date:  2020-07-30       Impact factor: 3.396

5.  Interferon-Gamma Stimulated Murine Macrophages In Vitro: Impact of Ionic Composition and Osmolarity and Therapeutic Implications.

Authors:  Joshua Erndt-Marino; Daniel J Yeisley; Hongyu Chen; Michael Levin; David L Kaplan; Mariah S Hahn
Journal:  Bioelectricity       Date:  2020-03-18

6.  3D-printed miniaturized fluidic tools in chemistry and biology.

Authors:  C K Dixit; K Kadimisetty; J Rusling
Journal:  Trends Analyt Chem       Date:  2018-07-05       Impact factor: 12.296

7.  Phenotypic Screening of Chemical Libraries Enriched by Molecular Docking to Multiple Targets Selected from Glioblastoma Genomic Data.

Authors:  David Xu; Donghui Zhou; Khuchtumur Bum-Erdene; Barbara J Bailey; Kamakshi Sishtla; Sheng Liu; Jun Wan; Uma K Aryal; Jonathan A Lee; Clark D Wells; Melissa L Fishel; Timothy W Corson; Karen E Pollok; Samy O Meroueh
Journal:  ACS Chem Biol       Date:  2020-05-21       Impact factor: 5.100

Review 8.  Studying Adipose Tissue in the Breast Tumor Microenvironment In Vitro: Progress and Opportunities.

Authors:  David Mertz; Jason Sentosa; Gary Luker; Shuichi Takayama
Journal:  Tissue Eng Regen Med       Date:  2020-09-16       Impact factor: 4.169

9.  Aromatic carbohydrate amphiphile disrupts cancer spheroids and prevents relapse.

Authors:  Alexandra Brito; Patrícia M R Pereira; Rui L Reis; Rein V Ulijn; Jason S Lewis; Ricardo A Pires; Iva Pashkuleva
Journal:  Nanoscale       Date:  2020-10-01       Impact factor: 7.790

10.  Biomechanics of Collective Cell Migration in Cancer Progression: Experimental and Computational Methods.

Authors:  Catalina-Paula Spatarelu; Hao Zhang; Dung Trung Nguyen; Xinyue Han; Ruchuan Liu; Qiaohang Guo; Jacob Notbohm; Jing Fan; Liyu Liu; Zi Chen
Journal:  ACS Biomater Sci Eng       Date:  2019-05-22
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